RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 RUSC2Q8N2Y8 1516 aa34.87■■■■□ 3.17
CACFD1-205ENST00000489519 CUL7Q14999 1698 aa34.86■■■■□ 3.17
CACFD1-205ENST00000489519 KIAA0586Q9BVV6 1533 aa34.79■■■■□ 3.16
CACFD1-205ENST00000489519 CARMIL1Q5VZK9 1371 aa34.74■■■■□ 3.15
CACFD1-205ENST00000489519 NPM1P06748 294 aaKnown RBP eCLIP34.62■■■■□ 3.13
CACFD1-205ENST00000489519 KIF13AQ9H1H9 1805 aa34.49■■■■□ 3.11
CACFD1-205ENST00000489519 ADCY10Q96PN6 1610 aa34.48■■■■□ 3.11
CACFD1-205ENST00000489519 CARMIL2Q6F5E8 1435 aa34.47■■■■□ 3.11
CACFD1-205ENST00000489519 PTPRGP23470 1445 aa34.46■■■■□ 3.11
CACFD1-205ENST00000489519 MAPKBP1O60336 1514 aa34.45■■■■□ 3.11
CACFD1-205ENST00000489519 IQGAP2Q13576 1575 aa34.44■■■■□ 3.1
CACFD1-205ENST00000489519 ABCC10Q5T3U5 1492 aa34.42■■■■□ 3.1
CACFD1-205ENST00000489519 RAPGEF2Q9Y4G8 1499 aa34.42■■■■□ 3.1
CACFD1-205ENST00000489519 FAM69CQ0P6D2 419 aa34.41■■■■□ 3.1
CACFD1-205ENST00000489519 TNIKQ9UKE5 1360 aa34.4■■■■□ 3.1
CACFD1-205ENST00000489519 TTBK1Q5TCY1 1321 aaPredicted RBP34.33■■■■□ 3.09
CACFD1-205ENST00000489519 DIP2BQ9P265 1576 aa34.28■■■■□ 3.08
CACFD1-205ENST00000489519 DISP1Q96F81 1524 aa34.25■■■■□ 3.07
CACFD1-205ENST00000489519 UGGT2Q9NYU1 1516 aa34.24■■■■□ 3.07
CACFD1-205ENST00000489519 ABCC2Q92887 1545 aa34.23■■■■□ 3.07
CACFD1-205ENST00000489519 AEBP2Q6ZN18 517 aaPredicted RBP34.22■■■■□ 3.07
CACFD1-205ENST00000489519 UHRF1BP1LA0JNW5 1464 aa34.2■■■■□ 3.06
CACFD1-205ENST00000489519 UACAQ9BZF9 1416 aa34.18■■■■□ 3.06
CACFD1-205ENST00000489519 PLB1Q6P1J6 1458 aa34.1■■■■□ 3.05
CACFD1-205ENST00000489519 KIAA0556O60303 1618 aa34.1■■■■□ 3.05
CACFD1-205ENST00000489519 PRXQ9BXM0 1461 aa34.09■■■■□ 3.05
CACFD1-205ENST00000489519 ASXL2Q76L83 1435 aa34.09■■■■□ 3.05
CACFD1-205ENST00000489519 CTTNBP2Q8WZ74 1663 aa34.08■■■■□ 3.05
CACFD1-205ENST00000489519 TSPOAP1O95153 1857 aa34.05■■■■□ 3.04
CACFD1-205ENST00000489519 KDM5BQ9UGL1 1544 aa34.03■■■■□ 3.04
CACFD1-205ENST00000489519 GOLGA3Q08378 1498 aa34.02■■■■□ 3.04
CACFD1-205ENST00000489519 GLI2P10070 1586 aa33.98■■■■□ 3.03
CACFD1-205ENST00000489519 KDM6BO15054 1643 aa33.97■■■■□ 3.03
CACFD1-205ENST00000489519 CSRNP3Q8WYN3 585 aa33.92■■■■□ 3.02
CACFD1-205ENST00000489519 ZCCHC11Q5TAX3 1644 aaKnown RBP33.9■■■■□ 3.02
CACFD1-205ENST00000489519 EPRSP07814 1512 aaKnown RBP33.87■■■■□ 3.01
CACFD1-205ENST00000489519 FAM9AQ8IZU1 332 aaPredicted RBP33.84■■■■□ 3.01
CACFD1-205ENST00000489519 PPRC1Q5VV67 1664 aaKnown RBP33.81■■■■□ 3
CACFD1-205ENST00000489519 ABCA8O94911 1581 aa33.8■■■■□ 3
CACFD1-205ENST00000489519 EEA1Q15075 1411 aa33.79■■■■□ 3
CACFD1-205ENST00000489519 WDR7Q9Y4E6 1490 aa33.78■■■■□ 3
CACFD1-205ENST00000489519 MAP3K4Q9Y6R4 1608 aa33.77■■■■□ 3
CACFD1-205ENST00000489519 TEX14Q8IWB6 1497 aa33.73■■■□□ 2.99
CACFD1-205ENST00000489519 P3H3Q8IVL6 736 aa33.7■■■□□ 2.99
CACFD1-205ENST00000489519 KCNH8Q96L42 1107 aa33.65■■■□□ 2.98
CACFD1-205ENST00000489519 SAMD9Q5K651 1589 aa33.61■■■□□ 2.97
CACFD1-205ENST00000489519 COL17A1Q9UMD9 1497 aaPredicted RBP33.61■■■□□ 2.97
CACFD1-205ENST00000489519 KDM4FA0A1W2PPD8 638 aa33.6■■■□□ 2.97
CACFD1-205ENST00000489519 CD109Q6YHK3 1445 aa33.59■■■□□ 2.97
CACFD1-205ENST00000489519 CFAP43Q8NDM7 1665 aa33.56■■■□□ 2.96
CACFD1-205ENST00000489519 ATP10BO94823 1461 aa33.55■■■□□ 2.96
CACFD1-205ENST00000489519 MAGI3Q5TCQ9 1506 aa33.54■■■□□ 2.96
CACFD1-205ENST00000489519 ARID3CA6NKF2 412 aa33.52■■■□□ 2.96
CACFD1-205ENST00000489519 RANGAP1P46060 587 aaPredicted RBP33.47■■■□□ 2.95
CACFD1-205ENST00000489519 RAPGEF6Q8TEU7 1601 aa33.46■■■□□ 2.95
CACFD1-205ENST00000489519 KIF21BO75037 1637 aa33.45■■■□□ 2.95
CACFD1-205ENST00000489519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.4■■■□□ 2.94
CACFD1-205ENST00000489519 HNRNPUL2Q1KMD3 747 aaKnown RBP33.4■■■□□ 2.94
CACFD1-205ENST00000489519 FHOD3Q2V2M9 1422 aa33.38■■■□□ 2.93
CACFD1-205ENST00000489519 CHIC1Q5VXU3 224 aa33.37■■■□□ 2.93
CACFD1-205ENST00000489519 NUP153P49790 1475 aaKnown RBP33.35■■■□□ 2.93
CACFD1-205ENST00000489519 EFCAB5A4FU69 1503 aa33.34■■■□□ 2.93
CACFD1-205ENST00000489519 ADGRL1O94910 1474 aa33.34■■■□□ 2.93
CACFD1-205ENST00000489519 ABCA9Q8IUA7 1624 aa33.32■■■□□ 2.92
CACFD1-205ENST00000489519 PHLDB1Q86UU1 1377 aa33.31■■■□□ 2.92
CACFD1-205ENST00000489519 ARAP3Q8WWN8 1544 aa33.29■■■□□ 2.92
CACFD1-205ENST00000489519 UBTFP17480 764 aaKnown RBP33.27■■■□□ 2.92
CACFD1-205ENST00000489519 PLEKHD1A6NEE1 506 aa33.26■■■□□ 2.91
CACFD1-205ENST00000489519 NEO1Q92859 1461 aa33.18■■■□□ 2.9
CACFD1-205ENST00000489519 EHMT2Q96KQ7 1210 aa33.18■■■□□ 2.9
CACFD1-205ENST00000489519 RAPGEF3O95398 923 aa33.09■■■□□ 2.89
CACFD1-205ENST00000489519 FMN1Q68DA7 1419 aa33.09■■■□□ 2.89
CACFD1-205ENST00000489519 ARHGAP35Q9NRY4 1499 aa33.04■■■□□ 2.88
CACFD1-205ENST00000489519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.01■■■□□ 2.87
CACFD1-205ENST00000489519 ATP1B4Q9UN42 357 aaPredicted RBP33■■■□□ 2.87
CACFD1-205ENST00000489519 CDK13Q14004 1512 aaKnown RBP33■■■□□ 2.87
CACFD1-205ENST00000489519 FANCAO15360 1455 aa32.97■■■□□ 2.87
CACFD1-205ENST00000489519 AKNAQ7Z591 1439 aa32.96■■■□□ 2.87
CACFD1-205ENST00000489519 CDK11AQ9UQ88 783 aaPredicted RBP32.96■■■□□ 2.87
CACFD1-205ENST00000489519 HECW1Q76N89 1606 aa32.95■■■□□ 2.87
CACFD1-205ENST00000489519 CFAP74Q9C0B2 1584 aa32.95■■■□□ 2.86
CACFD1-205ENST00000489519 DENND4BO75064 1496 aaPredicted RBP32.94■■■□□ 2.86
CACFD1-205ENST00000489519 FRMPD1Q5SYB0 1578 aa32.93■■■□□ 2.86
CACFD1-205ENST00000489519 TTC37Q6PGP7 1564 aa32.93■■■□□ 2.86
CACFD1-205ENST00000489519 PLCH2O75038 1416 aa32.85■■■□□ 2.85
CACFD1-205ENST00000489519 RICTORQ6R327 1708 aa32.85■■■□□ 2.85
CACFD1-205ENST00000489519 ARID4BQ4LE39 1312 aaPredicted RBP32.83■■■□□ 2.85
CACFD1-205ENST00000489519 HECW2Q9P2P5 1572 aa32.82■■■□□ 2.84
CACFD1-205ENST00000489519 ADAMTSL3P82987 1691 aa32.8■■■□□ 2.84
CACFD1-205ENST00000489519 ARHGEF40Q8TER5 1519 aa32.78■■■□□ 2.84
CACFD1-205ENST00000489519 EFCAB2Q5VUJ9 269 aa32.78■■■□□ 2.84
CACFD1-205ENST00000489519 TROQ12816 1431 aaPredicted RBP32.77■■■□□ 2.84
CACFD1-205ENST00000489519 ZMYM4Q5VZL5 1548 aa32.76■■■□□ 2.83
CACFD1-205ENST00000489519 CLIP1P30622 1438 aa32.76■■■□□ 2.83
CACFD1-205ENST00000489519 SCAPERQ9BY12 1400 aa32.75■■■□□ 2.83
CACFD1-205ENST00000489519 MAGI2Q86UL8 1455 aa32.74■■■□□ 2.83
CACFD1-205ENST00000489519 BCORL1Q5H9F3 1711 aa32.74■■■□□ 2.83
CACFD1-205ENST00000489519 MYO5CQ9NQX4 1742 aa32.74■■■□□ 2.83
CACFD1-205ENST00000489519 PTPRMP28827 1452 aa32.74■■■□□ 2.83
CACFD1-205ENST00000489519 KIF14Q15058 1648 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms