RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 PRXQ9BXM0 1461 aa24.09■■□□□ 1.45
HLA-F-229ENST00000489502 SHROOM2Q13796 1616 aa24.04■■□□□ 1.44
HLA-F-229ENST00000489502 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
HLA-F-229ENST00000489502 KIAA0586Q9BVV6 1533 aa24■■□□□ 1.43
HLA-F-229ENST00000489502 ERCC6L2Q5T890 1561 aa23.99■■□□□ 1.43
HLA-F-229ENST00000489502 CTTNBP2Q8WZ74 1663 aa23.98■■□□□ 1.43
HLA-F-229ENST00000489502 IQGAP2Q13576 1575 aa23.97■■□□□ 1.43
HLA-F-229ENST00000489502 KIF21BO75037 1637 aa23.96■■□□□ 1.43
HLA-F-229ENST00000489502 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
HLA-F-229ENST00000489502 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
HLA-F-229ENST00000489502 JPH4Q96JJ6 628 aa23.88■■□□□ 1.41
HLA-F-229ENST00000489502 EHMT2Q96KQ7 1210 aa23.82■■□□□ 1.4
HLA-F-229ENST00000489502 UGGT2Q9NYU1 1516 aa23.81■■□□□ 1.4
HLA-F-229ENST00000489502 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
HLA-F-229ENST00000489502 CYB5RLQ6IPT4 315 aa23.78■■□□□ 1.4
HLA-F-229ENST00000489502 DISP1Q96F81 1524 aa23.76■■□□□ 1.39
HLA-F-229ENST00000489502 KIAA0556O60303 1618 aa23.76■■□□□ 1.39
HLA-F-229ENST00000489502 CARMIL2Q6F5E8 1435 aa23.72■■□□□ 1.39
HLA-F-229ENST00000489502 UBTFP17480 764 aaKnown RBP23.66■■□□□ 1.38
HLA-F-229ENST00000489502 SAMD9Q5K651 1589 aa23.65■■□□□ 1.38
HLA-F-229ENST00000489502 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.38
HLA-F-229ENST00000489502 TNIKQ9UKE5 1360 aa23.64■■□□□ 1.37
HLA-F-229ENST00000489502 RANGAP1P46060 587 aaPredicted RBP23.62■■□□□ 1.37
HLA-F-229ENST00000489502 PTPRGP23470 1445 aa23.6■■□□□ 1.37
HLA-F-229ENST00000489502 ADCY10Q96PN6 1610 aa23.58■■□□□ 1.36
HLA-F-229ENST00000489502 EFCAB5A4FU69 1503 aa23.55■■□□□ 1.36
HLA-F-229ENST00000489502 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
HLA-F-229ENST00000489502 FHOD3Q2V2M9 1422 aa23.52■■□□□ 1.36
HLA-F-229ENST00000489502 PLB1Q6P1J6 1458 aa23.48■■□□□ 1.35
HLA-F-229ENST00000489502 ARHGAP35Q9NRY4 1499 aa23.48■■□□□ 1.35
HLA-F-229ENST00000489502 ABCC2Q92887 1545 aa23.48■■□□□ 1.35
HLA-F-229ENST00000489502 UACAQ9BZF9 1416 aa23.47■■□□□ 1.35
HLA-F-229ENST00000489502 ABCA8O94911 1581 aa23.45■■□□□ 1.34
HLA-F-229ENST00000489502 UHRF1BP1LA0JNW5 1464 aa23.43■■□□□ 1.34
HLA-F-229ENST00000489502 LOC105371045A0A1W2PR82 267 aa23.41■■□□□ 1.34
HLA-F-229ENST00000489502 RAPGEF6Q8TEU7 1601 aa23.38■■□□□ 1.33
HLA-F-229ENST00000489502 CLIP1P30622 1438 aa23.38■■□□□ 1.33
HLA-F-229ENST00000489502 ZCCHC11Q5TAX3 1644 aaKnown RBP23.37■■□□□ 1.33
HLA-F-229ENST00000489502 CEP162Q5TB80 1403 aa23.34■■□□□ 1.33
HLA-F-229ENST00000489502 MAPKBP1O60336 1514 aa23.34■■□□□ 1.33
HLA-F-229ENST00000489502 KDM5BQ9UGL1 1544 aa23.34■■□□□ 1.33
HLA-F-229ENST00000489502 NPM1P06748 294 aaKnown RBP eCLIP23.32■■□□□ 1.32
HLA-F-229ENST00000489502 NUP153P49790 1475 aaKnown RBP23.29■■□□□ 1.32
HLA-F-229ENST00000489502 FMN1Q68DA7 1419 aa23.28■■□□□ 1.32
HLA-F-229ENST00000489502 ARID3CA6NKF2 412 aa23.28■■□□□ 1.32
HLA-F-229ENST00000489502 PCF11O94913 1555 aaKnown RBP23.26■■□□□ 1.31
HLA-F-229ENST00000489502 ASXL2Q76L83 1435 aa23.25■■□□□ 1.31
HLA-F-229ENST00000489502 TRHP20396 242 aaPredicted RBP23.24■■□□□ 1.31
HLA-F-229ENST00000489502 KIF13AQ9H1H9 1805 aa23.24■■□□□ 1.31
HLA-F-229ENST00000489502 DIP2BQ9P265 1576 aa23.23■■□□□ 1.31
HLA-F-229ENST00000489502 HECW1Q76N89 1606 aa23.23■■□□□ 1.31
HLA-F-229ENST00000489502 ATP10BO94823 1461 aa23.22■■□□□ 1.31
HLA-F-229ENST00000489502 CDK13Q14004 1512 aaKnown RBP23.19■■□□□ 1.3
HLA-F-229ENST00000489502 ABCC10Q5T3U5 1492 aa23.19■■□□□ 1.3
HLA-F-229ENST00000489502 WDR7Q9Y4E6 1490 aa23.17■■□□□ 1.3
HLA-F-229ENST00000489502 LRRIQ1Q96JM4 1722 aa23.17■■□□□ 1.3
HLA-F-229ENST00000489502 CASKIN1Q8WXD9 1431 aa23.15■■□□□ 1.3
HLA-F-229ENST00000489502 ATP1B4Q9UN42 357 aaPredicted RBP23.14■■□□□ 1.29
HLA-F-229ENST00000489502 EPRSP07814 1512 aaKnown RBP23.13■■□□□ 1.29
HLA-F-229ENST00000489502 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
HLA-F-229ENST00000489502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
HLA-F-229ENST00000489502 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
HLA-F-229ENST00000489502 FAM69CQ0P6D2 419 aa23.09■■□□□ 1.29
HLA-F-229ENST00000489502 GLI2P10070 1586 aa23.07■■□□□ 1.28
HLA-F-229ENST00000489502 TSPOAP1O95153 1857 aa23.05■■□□□ 1.28
HLA-F-229ENST00000489502 CCDC18Q5T9S5 1454 aa23.05■■□□□ 1.28
HLA-F-229ENST00000489502 VPS8Q8N3P4 1428 aa23.02■■□□□ 1.28
HLA-F-229ENST00000489502 MAP3K4Q9Y6R4 1608 aa23.02■■□□□ 1.28
HLA-F-229ENST00000489502 KCNH8Q96L42 1107 aa23.01■■□□□ 1.27
HLA-F-229ENST00000489502 PPRC1Q5VV67 1664 aaKnown RBP22.99■■□□□ 1.27
HLA-F-229ENST00000489502 CFAP43Q8NDM7 1665 aa22.98■■□□□ 1.27
HLA-F-229ENST00000489502 MAGI3Q5TCQ9 1506 aa22.97■■□□□ 1.27
HLA-F-229ENST00000489502 ABCA9Q8IUA7 1624 aa22.97■■□□□ 1.27
HLA-F-229ENST00000489502 PLEKHD1A6NEE1 506 aa22.95■■□□□ 1.26
HLA-F-229ENST00000489502 KIF14Q15058 1648 aa22.95■■□□□ 1.26
HLA-F-229ENST00000489502 TTC37Q6PGP7 1564 aa22.94■■□□□ 1.26
HLA-F-229ENST00000489502 TROQ12816 1431 aaPredicted RBP22.92■■□□□ 1.26
HLA-F-229ENST00000489502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.91■■□□□ 1.26
HLA-F-229ENST00000489502 CD109Q6YHK3 1445 aa22.9■■□□□ 1.26
HLA-F-229ENST00000489502 CDK11AQ9UQ88 783 aaPredicted RBP22.89■■□□□ 1.25
HLA-F-229ENST00000489502 TIAM1Q13009 1591 aa22.88■■□□□ 1.25
HLA-F-229ENST00000489502 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
HLA-F-229ENST00000489502 EHBP1L1Q8N3D4 1523 aa22.83■■□□□ 1.25
HLA-F-229ENST00000489502 MYO5CQ9NQX4 1742 aa22.81■■□□□ 1.24
HLA-F-229ENST00000489502 MTUS2Q5JR59 1369 aa22.8■■□□□ 1.24
HLA-F-229ENST00000489502 KDM6BO15054 1643 aa22.79■■□□□ 1.24
HLA-F-229ENST00000489502 MAP3K1Q13233 1512 aa22.75■■□□□ 1.23
HLA-F-229ENST00000489502 PREX2Q70Z35 1606 aa22.75■■□□□ 1.23
HLA-F-229ENST00000489502 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
HLA-F-229ENST00000489502 LRRC9Q6ZRR7 1453 aa22.73■■□□□ 1.23
HLA-F-229ENST00000489502 CFAP74Q9C0B2 1584 aa22.73■■□□□ 1.23
HLA-F-229ENST00000489502 FANCAO15360 1455 aa22.72■■□□□ 1.23
HLA-F-229ENST00000489502 SUPT6HQ7KZ85 1726 aaKnown RBP22.71■■□□□ 1.23
HLA-F-229ENST00000489502 PLCH2O75038 1416 aa22.71■■□□□ 1.23
HLA-F-229ENST00000489502 NEO1Q92859 1461 aa22.71■■□□□ 1.23
HLA-F-229ENST00000489502 COL17A1Q9UMD9 1497 aaPredicted RBP22.71■■□□□ 1.23
HLA-F-229ENST00000489502 ARHGAP5Q13017 1502 aa22.71■■□□□ 1.23
HLA-F-229ENST00000489502 CDC42BPBQ9Y5S2 1711 aa22.71■■□□□ 1.23
HLA-F-229ENST00000489502 ARAP3Q8WWN8 1544 aa22.7■■□□□ 1.22
HLA-F-229ENST00000489502 KANK4Q5T7N3 995 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms