RNA–Protein interactions for RNA: ENST00000489377.1

MSANTD3-205, Transcript of Myb/SANT DNA binding domain containing 3, human

TSL 2

Gene MSANTD3, Length 1,991 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSANTD3-205	ENST00000489377	CUX1	P39880	1505 aa		13.75	□□□□□ -0.21
MSANTD3-205	ENST00000489377	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.74	□□□□□ -0.21
MSANTD3-205	ENST00000489377	BIVM-ERCC5	R4GMW8	1640 aa		13.72	□□□□□ -0.21
MSANTD3-205	ENST00000489377	TAF7L	Q5H9L4	462 aa		13.72	□□□□□ -0.21
MSANTD3-205	ENST00000489377	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.72	□□□□□ -0.21
MSANTD3-205	ENST00000489377	TOP2B	Q02880	1626 aa		13.72	□□□□□ -0.21
MSANTD3-205	ENST00000489377	SYNJ1	O43426	1573 aa		13.69	□□□□□ -0.22
MSANTD3-205	ENST00000489377	LOC105371045	A0A1W2PR82	267 aa		13.69	□□□□□ -0.22
MSANTD3-205	ENST00000489377	FGD5	Q6ZNL6	1462 aa		13.68	□□□□□ -0.22
MSANTD3-205	ENST00000489377	POLA1	P09884	1462 aa	Predicted RBP	13.67	□□□□□ -0.22
MSANTD3-205	ENST00000489377	IFT140	Q96RY7	1462 aa		13.67	□□□□□ -0.22
MSANTD3-205	ENST00000489377	CHMP4A	Q9BY43	222 aa		13.67	□□□□□ -0.22
MSANTD3-205	ENST00000489377	SOGA1	O94964	1423 aa		13.63	□□□□□ -0.23
MSANTD3-205	ENST00000489377	TARBP1	Q13395	1621 aa	Known RBP	13.62	□□□□□ -0.23
MSANTD3-205	ENST00000489377	DIEXF	Q68CQ4	756 aa	Known RBP	13.61	□□□□□ -0.23
MSANTD3-205	ENST00000489377	BRD2	P25440	801 aa	Known RBP	13.6	□□□□□ -0.23
MSANTD3-205	ENST00000489377	RAD54L2	Q9Y4B4	1467 aa		13.59	□□□□□ -0.23
MSANTD3-205	ENST00000489377	WDR97	A6NE52	1622 aa		13.59	□□□□□ -0.23
MSANTD3-205	ENST00000489377	FGD1	P98174	961 aa		13.58	□□□□□ -0.24
MSANTD3-205	ENST00000489377	TRIM41	Q8WV44	630 aa		13.58	□□□□□ -0.24
MSANTD3-205	ENST00000489377	HAP1	P54257	671 aa	Predicted RBP	13.57	□□□□□ -0.24
MSANTD3-205	ENST00000489377	ABCA10	Q8WWZ4	1543 aa		13.57	□□□□□ -0.24
MSANTD3-205	ENST00000489377	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.55	□□□□□ -0.24
MSANTD3-205	ENST00000489377	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.55	□□□□□ -0.24
MSANTD3-205	ENST00000489377	TMEM132A	Q24JP5	1023 aa		13.54	□□□□□ -0.24
MSANTD3-205	ENST00000489377	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.53	□□□□□ -0.24
MSANTD3-205	ENST00000489377	EIF4G3	O43432	1585 aa	Known RBP	13.53	□□□□□ -0.24
MSANTD3-205	ENST00000489377	CNKSR2	Q8WXI2	1034 aa		13.51	□□□□□ -0.25
MSANTD3-205	ENST00000489377	TDRD9	Q8NDG6	1382 aa	Known RBP	13.5	□□□□□ -0.25
MSANTD3-205	ENST00000489377	ABCA5	Q8WWZ7	1642 aa		13.5	□□□□□ -0.25
MSANTD3-205	ENST00000489377	AQR	O60306	1485 aa	Known RBP eCLIP	13.49	□□□□□ -0.25	2e-6	■■■□□ 18.3
MSANTD3-205	ENST00000489377	GAPVD1	Q14C86	1478 aa		13.49	□□□□□ -0.25
MSANTD3-205	ENST00000489377	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.49	□□□□□ -0.25
MSANTD3-205	ENST00000489377	DHX37	Q8IY37	1157 aa	Known RBP	13.48	□□□□□ -0.25
MSANTD3-205	ENST00000489377	KIF27	Q86VH2	1401 aa		13.47	□□□□□ -0.25
MSANTD3-205	ENST00000489377	PBRM1	Q86U86	1689 aa		13.47	□□□□□ -0.25
MSANTD3-205	ENST00000489377	GRIN2B	Q13224	1484 aa		13.47	□□□□□ -0.25
MSANTD3-205	ENST00000489377	CLSPN	Q9HAW4	1339 aa		13.46	□□□□□ -0.26
MSANTD3-205	ENST00000489377	PLCB2	Q00722	1185 aa		13.45	□□□□□ -0.26
MSANTD3-205	ENST00000489377	ERICH6B	Q5W0A0	696 aa		13.45	□□□□□ -0.26
MSANTD3-205	ENST00000489377	CDK11B	P21127	795 aa	Known RBP	13.45	□□□□□ -0.26
MSANTD3-205	ENST00000489377	ERICH3	Q5RHP9	1530 aa		13.43	□□□□□ -0.26
MSANTD3-205	ENST00000489377	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.42	□□□□□ -0.26
MSANTD3-205	ENST00000489377	TSHZ2	Q9NRE2	1034 aa		13.41	□□□□□ -0.26
MSANTD3-205	ENST00000489377	SNAPC4	Q5SXM2	1469 aa		13.4	□□□□□ -0.26
MSANTD3-205	ENST00000489377	EEA1	Q15075	1411 aa		13.38	□□□□□ -0.27
MSANTD3-205	ENST00000489377	CUL7	Q14999	1698 aa		13.37	□□□□□ -0.27
MSANTD3-205	ENST00000489377	ADAMTS12	P58397	1594 aa		13.36	□□□□□ -0.27
MSANTD3-205	ENST00000489377	FHAD1	B1AJZ9	1412 aa		13.35	□□□□□ -0.27
MSANTD3-205	ENST00000489377	SYNJ2	O15056	1496 aa		13.35	□□□□□ -0.27
MSANTD3-205	ENST00000489377	IGF1R	P08069	1367 aa		13.34	□□□□□ -0.27
MSANTD3-205	ENST00000489377	HSP90B1	P14625	803 aa	Known RBP	13.34	□□□□□ -0.27
MSANTD3-205	ENST00000489377	RUSC2	Q8N2Y8	1516 aa		13.34	□□□□□ -0.27
MSANTD3-205	ENST00000489377	CHD1	O14646	1710 aa		13.33	□□□□□ -0.28
MSANTD3-205	ENST00000489377	RSPH4A	Q5TD94	716 aa		13.32	□□□□□ -0.28
MSANTD3-205	ENST00000489377	YTHDC1	Q96MU7	727 aa	Known RBP	13.32	□□□□□ -0.28
MSANTD3-205	ENST00000489377	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.32	□□□□□ -0.28
MSANTD3-205	ENST00000489377	ZNF326	Q5BKZ1	582 aa	Known RBP	13.31	□□□□□ -0.28
MSANTD3-205	ENST00000489377	AAMP	Q13685	434 aa		13.31	□□□□□ -0.28
MSANTD3-205	ENST00000489377	FBLN2	P98095	1184 aa		13.3	□□□□□ -0.28
MSANTD3-205	ENST00000489377	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.3	□□□□□ -0.28
MSANTD3-205	ENST00000489377	CARMIL1	Q5VZK9	1371 aa		13.3	□□□□□ -0.28
MSANTD3-205	ENST00000489377	SALL2	Q9Y467	1007 aa	Predicted RBP	13.29	□□□□□ -0.28
MSANTD3-205	ENST00000489377	GRIN2A	Q12879	1464 aa		13.28	□□□□□ -0.28
MSANTD3-205	ENST00000489377	CCER1	Q8TC90	406 aa	Predicted RBP	13.27	□□□□□ -0.29
MSANTD3-205	ENST00000489377	RSPH6A	Q9H0K4	717 aa		13.26	□□□□□ -0.29
MSANTD3-205	ENST00000489377	OSCAR	Q8IYS5	282 aa		13.25	□□□□□ -0.29
MSANTD3-205	ENST00000489377	MYT1L	Q9UL68	1186 aa		13.25	□□□□□ -0.29
MSANTD3-205	ENST00000489377	RAPGEF2	Q9Y4G8	1499 aa		13.25	□□□□□ -0.29
MSANTD3-205	ENST00000489377	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.24	□□□□□ -0.29
MSANTD3-205	ENST00000489377	PRX	Q9BXM0	1461 aa		13.24	□□□□□ -0.29
MSANTD3-205	ENST00000489377	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.22	□□□□□ -0.29
MSANTD3-205	ENST00000489377	UBTF	P17480	764 aa	Known RBP	13.21	□□□□□ -0.29
MSANTD3-205	ENST00000489377	KIF21B	O75037	1637 aa		13.21	□□□□□ -0.29
MSANTD3-205	ENST00000489377	CCDC136	Q96JN2	1154 aa		13.21	□□□□□ -0.29
MSANTD3-205	ENST00000489377	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
MSANTD3-205	ENST00000489377	NUP160	Q12769	1436 aa		13.2	□□□□□ -0.3
MSANTD3-205	ENST00000489377	CEP170	Q5SW79	1584 aa		13.2	□□□□□ -0.3
MSANTD3-205	ENST00000489377	CLASP1	Q7Z460	1538 aa		13.18	□□□□□ -0.3
MSANTD3-205	ENST00000489377		A0A0U1RQG5	324 aa	Predicted RBP	13.18	□□□□□ -0.3
MSANTD3-205	ENST00000489377	HMGB1	P09429	215 aa	Known RBP	13.18	□□□□□ -0.3
MSANTD3-205	ENST00000489377	MIER1	Q8N108	512 aa		13.17	□□□□□ -0.3
MSANTD3-205	ENST00000489377	GOLGA3	Q08378	1498 aa		13.15	□□□□□ -0.3
MSANTD3-205	ENST00000489377	CTTNBP2	Q8WZ74	1663 aa		13.15	□□□□□ -0.31
MSANTD3-205	ENST00000489377	KIAA0586	Q9BVV6	1533 aa		13.14	□□□□□ -0.31
MSANTD3-205	ENST00000489377	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.13	□□□□□ -0.31
MSANTD3-205	ENST00000489377	GLIPR1L2	Q4G1C9	344 aa		13.12	□□□□□ -0.31
MSANTD3-205	ENST00000489377	RBM10	P98175	930 aa	Known RBP	13.12	□□□□□ -0.31
MSANTD3-205	ENST00000489377	IQGAP2	Q13576	1575 aa		13.11	□□□□□ -0.31
MSANTD3-205	ENST00000489377	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.11	□□□□□ -0.31
MSANTD3-205	ENST00000489377	SHROOM2	Q13796	1616 aa		13.1	□□□□□ -0.31
MSANTD3-205	ENST00000489377	IGSF3	O75054	1194 aa		13.09	□□□□□ -0.31
MSANTD3-205	ENST00000489377	DNAJC5	Q9H3Z4	198 aa		13.09	□□□□□ -0.31
MSANTD3-205	ENST00000489377	JPH4	Q96JJ6	628 aa		13.06	□□□□□ -0.32
MSANTD3-205	ENST00000489377	UGGT2	Q9NYU1	1516 aa		13.05	□□□□□ -0.32
MSANTD3-205	ENST00000489377	PPP6R1	Q9UPN7	881 aa		13.03	□□□□□ -0.32
MSANTD3-205	ENST00000489377	RBM19	Q9Y4C8	960 aa	Known RBP	13.03	□□□□□ -0.32
MSANTD3-205	ENST00000489377	PRG4	Q92954	1404 aa	Predicted RBP	13.03	□□□□□ -0.32
MSANTD3-205	ENST00000489377	ARHGEF11	O15085	1522 aa		13.03	□□□□□ -0.32
MSANTD3-205	ENST00000489377	CARMIL2	Q6F5E8	1435 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms