RNA–Protein interactions for RNA: ENST00000489300.1

CDK11A-218, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-218ENST00000489300 ARHGEF11O15085 1522 aa28.83■■■□□ 2.21
CDK11A-218ENST00000489300 RIMBP3CA6NJZ7 1639 aa28.75■■■□□ 2.19
CDK11A-218ENST00000489300 RIMBP3BA6NNM3 1639 aa28.75■■■□□ 2.19
CDK11A-218ENST00000489300 RIMBP3Q9UFD9 1639 aa28.75■■■□□ 2.19
CDK11A-218ENST00000489300 CYB5RLQ6IPT4 315 aa28.71■■■□□ 2.19
CDK11A-218ENST00000489300 PRG4Q92954 1404 aaPredicted RBP28.7■■■□□ 2.19
CDK11A-218ENST00000489300 SHROOM2Q13796 1616 aa28.65■■■□□ 2.18
CDK11A-218ENST00000489300 CARMIL2Q6F5E8 1435 aa28.64■■■□□ 2.18
CDK11A-218ENST00000489300 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
CDK11A-218ENST00000489300 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
CDK11A-218ENST00000489300 UBTFP17480 764 aaKnown RBP28.57■■■□□ 2.16
CDK11A-218ENST00000489300 KIF21BO75037 1637 aa28.56■■■□□ 2.16
CDK11A-218ENST00000489300 GOLGA3Q08378 1498 aa28.52■■■□□ 2.16
CDK11A-218ENST00000489300 UGGT2Q9NYU1 1516 aa28.49■■■□□ 2.15
CDK11A-218ENST00000489300 ERCC6L2Q5T890 1561 aa28.49■■■□□ 2.15
CDK11A-218ENST00000489300 TNIKQ9UKE5 1360 aa28.49■■■□□ 2.15
CDK11A-218ENST00000489300 EHMT2Q96KQ7 1210 aa28.47■■■□□ 2.15
CDK11A-218ENST00000489300 CTTNBP2Q8WZ74 1663 aa28.45■■■□□ 2.15
CDK11A-218ENST00000489300 PTPRGP23470 1445 aa28.44■■■□□ 2.14
CDK11A-218ENST00000489300 DISP1Q96F81 1524 aa28.39■■■□□ 2.14
CDK11A-218ENST00000489300 TTBK1Q5TCY1 1321 aaPredicted RBP28.39■■■□□ 2.13
CDK11A-218ENST00000489300 NPM1P06748 294 aaKnown RBP eCLIP28.37■■■□□ 2.13
CDK11A-218ENST00000489300 RANGAP1P46060 587 aaPredicted RBP28.36■■■□□ 2.13
CDK11A-218ENST00000489300 KIAA0556O60303 1618 aa28.31■■■□□ 2.12
CDK11A-218ENST00000489300 P3H3Q8IVL6 736 aa28.28■■■□□ 2.12
CDK11A-218ENST00000489300 UACAQ9BZF9 1416 aa28.23■■■□□ 2.11
CDK11A-218ENST00000489300 EFCAB5A4FU69 1503 aa28.21■■■□□ 2.11
CDK11A-218ENST00000489300 SAMD9Q5K651 1589 aa28.17■■■□□ 2.1
CDK11A-218ENST00000489300 UHRF1BP1LA0JNW5 1464 aa28.15■■■□□ 2.1
CDK11A-218ENST00000489300 TRHP20396 242 aaPredicted RBP28.13■■■□□ 2.09
CDK11A-218ENST00000489300 FHOD3Q2V2M9 1422 aa28.09■■■□□ 2.09
CDK11A-218ENST00000489300 ABCC2Q92887 1545 aa28.09■■■□□ 2.09
CDK11A-218ENST00000489300 ADCY10Q96PN6 1610 aa28.07■■■□□ 2.08
CDK11A-218ENST00000489300 LOC105371045A0A1W2PR82 267 aa28.05■■■□□ 2.08
CDK11A-218ENST00000489300 PLB1Q6P1J6 1458 aa28.05■■■□□ 2.08
CDK11A-218ENST00000489300 FMN1Q68DA7 1419 aa28.04■■■□□ 2.08
CDK11A-218ENST00000489300 ARHGAP35Q9NRY4 1499 aa28.02■■■□□ 2.08
CDK11A-218ENST00000489300 CLIP1P30622 1438 aa28.02■■■□□ 2.08
CDK11A-218ENST00000489300 ABCA8O94911 1581 aa28■■■□□ 2.07
CDK11A-218ENST00000489300 KDM5BQ9UGL1 1544 aa27.98■■■□□ 2.07
CDK11A-218ENST00000489300 MAPKBP1O60336 1514 aa27.97■■■□□ 2.07
CDK11A-218ENST00000489300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.95■■■□□ 2.06
CDK11A-218ENST00000489300 HNRNPUL2Q1KMD3 747 aaKnown RBP27.95■■■□□ 2.06
CDK11A-218ENST00000489300 ATP1B4Q9UN42 357 aaPredicted RBP27.92■■■□□ 2.06
CDK11A-218ENST00000489300 CEP162Q5TB80 1403 aa27.91■■■□□ 2.06
CDK11A-218ENST00000489300 RAPGEF6Q8TEU7 1601 aa27.9■■■□□ 2.06
CDK11A-218ENST00000489300 FAM69CQ0P6D2 419 aa27.9■■■□□ 2.06
CDK11A-218ENST00000489300 ASXL2Q76L83 1435 aa27.89■■■□□ 2.06
CDK11A-218ENST00000489300 ARID3CA6NKF2 412 aa27.88■■■□□ 2.05
CDK11A-218ENST00000489300 ABCC10Q5T3U5 1492 aa27.85■■■□□ 2.05
CDK11A-218ENST00000489300 ATP10BO94823 1461 aa27.83■■■□□ 2.05
CDK11A-218ENST00000489300 CDK11AQ9UQ88 783 aaPredicted RBP27.83■■■□□ 2.05
CDK11A-218ENST00000489300 ZCCHC11Q5TAX3 1644 aaKnown RBP27.82■■■□□ 2.04
CDK11A-218ENST00000489300 PLEKHD1A6NEE1 506 aa27.82■■■□□ 2.04
CDK11A-218ENST00000489300 NUP153P49790 1475 aaKnown RBP27.82■■■□□ 2.04
CDK11A-218ENST00000489300 WDR7Q9Y4E6 1490 aa27.78■■■□□ 2.04
CDK11A-218ENST00000489300 CASKIN1Q8WXD9 1431 aa27.76■■■□□ 2.04
CDK11A-218ENST00000489300 KCNH8Q96L42 1107 aa27.76■■■□□ 2.03
CDK11A-218ENST00000489300 HECW1Q76N89 1606 aa27.74■■■□□ 2.03
CDK11A-218ENST00000489300 EPRSP07814 1512 aaKnown RBP27.71■■■□□ 2.03
CDK11A-218ENST00000489300 DIP2BQ9P265 1576 aa27.69■■■□□ 2.02
CDK11A-218ENST00000489300 FYCO1Q9BQS8 1478 aa27.69■■■□□ 2.02
CDK11A-218ENST00000489300 CCDC18Q5T9S5 1454 aa27.67■■■□□ 2.02
CDK11A-218ENST00000489300 GLI2P10070 1586 aa27.66■■■□□ 2.02
CDK11A-218ENST00000489300 CDK13Q14004 1512 aaKnown RBP27.6■■■□□ 2.01
CDK11A-218ENST00000489300 PCF11O94913 1555 aaKnown RBP27.6■■■□□ 2.01
CDK11A-218ENST00000489300 VPS8Q8N3P4 1428 aa27.58■■■□□ 2.01
CDK11A-218ENST00000489300 CD109Q6YHK3 1445 aa27.57■■■□□ 2
CDK11A-218ENST00000489300 KIF13AQ9H1H9 1805 aa27.56■■■□□ 2
CDK11A-218ENST00000489300 TEX14Q8IWB6 1497 aa27.53■■■□□ 2
CDK11A-218ENST00000489300 APLP2Q06481 763 aa27.53■■■□□ 2
CDK11A-218ENST00000489300 TROQ12816 1431 aaPredicted RBP27.51■■□□□ 1.99
CDK11A-218ENST00000489300 MTUS2Q5JR59 1369 aa27.46■■□□□ 1.99
CDK11A-218ENST00000489300 MAGI3Q5TCQ9 1506 aa27.46■■□□□ 1.99
CDK11A-218ENST00000489300 CFAP43Q8NDM7 1665 aa27.45■■□□□ 1.98
CDK11A-218ENST00000489300 MAP3K4Q9Y6R4 1608 aa27.45■■□□□ 1.98
CDK11A-218ENST00000489300 PHLDB1Q86UU1 1377 aa27.43■■□□□ 1.98
CDK11A-218ENST00000489300 ABCA9Q8IUA7 1624 aa27.42■■□□□ 1.98
CDK11A-218ENST00000489300 KIF14Q15058 1648 aa27.38■■□□□ 1.97
CDK11A-218ENST00000489300 TSPOAP1O95153 1857 aa27.37■■□□□ 1.97
CDK11A-218ENST00000489300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.36■■□□□ 1.97
CDK11A-218ENST00000489300 EFCAB2Q5VUJ9 269 aa27.34■■□□□ 1.97
CDK11A-218ENST00000489300 LRRIQ1Q96JM4 1722 aa27.33■■□□□ 1.97
CDK11A-218ENST00000489300 PLCH2O75038 1416 aa27.33■■□□□ 1.96
CDK11A-218ENST00000489300 MAP3K1Q13233 1512 aa27.32■■□□□ 1.96
CDK11A-218ENST00000489300 NEO1Q92859 1461 aa27.31■■□□□ 1.96
CDK11A-218ENST00000489300 EHBP1L1Q8N3D4 1523 aa27.28■■□□□ 1.96
CDK11A-218ENST00000489300 PPRC1Q5VV67 1664 aaKnown RBP27.27■■□□□ 1.96
CDK11A-218ENST00000489300 TIAM1Q13009 1591 aa27.26■■□□□ 1.96
CDK11A-218ENST00000489300 FANCAO15360 1455 aa27.26■■□□□ 1.95
CDK11A-218ENST00000489300 CCNB3Q8WWL7 1395 aa27.26■■□□□ 1.95
CDK11A-218ENST00000489300 KDM6BO15054 1643 aa27.26■■□□□ 1.95
CDK11A-218ENST00000489300 TTC37Q6PGP7 1564 aa27.25■■□□□ 1.95
CDK11A-218ENST00000489300 ARAP3Q8WWN8 1544 aa27.24■■□□□ 1.95
CDK11A-218ENST00000489300 LRRC9Q6ZRR7 1453 aa27.23■■□□□ 1.95
CDK11A-218ENST00000489300 AKNAQ7Z591 1439 aa27.23■■□□□ 1.95
CDK11A-218ENST00000489300 CFAP74Q9C0B2 1584 aa27.22■■□□□ 1.95
CDK11A-218ENST00000489300 CFDP1Q9UEE9 299 aaPredicted RBP27.2■■□□□ 1.94
CDK11A-218ENST00000489300 ARHGAP5Q13017 1502 aa27.2■■□□□ 1.94
CDK11A-218ENST00000489300 KANK4Q5T7N3 995 aaPredicted RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms