RNA–Protein interactions for RNA: ENST00000489243.5

KDM4C-209, Transcript of lysine demethylase 4C, humanhuman

TSL 2

Gene KDM4C, Length 1,439 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-209ENST00000489243 BAZ1BQ9UIG0 1483 aaKnown RBP11.36□□□□□ -0.59
KDM4C-209ENST00000489243 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
KDM4C-209ENST00000489243 CD44P16070 742 aaKnown RBP11.32□□□□□ -0.6
KDM4C-209ENST00000489243 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
KDM4C-209ENST00000489243 PEG3Q9GZU2 1588 aa11.3□□□□□ -0.6
KDM4C-209ENST00000489243 NESP48681 1621 aa11.3□□□□□ -0.6
KDM4C-209ENST00000489243 WIZO95785 1651 aa11.28□□□□□ -0.6
KDM4C-209ENST00000489243 ERCC6Q03468 1493 aa11.26□□□□□ -0.61
KDM4C-209ENST00000489243 GABBR2O75899 941 aa11.26□□□□□ -0.61
KDM4C-209ENST00000489243 PROM2Q8N271 834 aa11.25□□□□□ -0.61
KDM4C-209ENST00000489243 RSF1Q96T23 1441 aaPredicted RBP11.22□□□□□ -0.61
KDM4C-209ENST00000489243 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
KDM4C-209ENST00000489243 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
KDM4C-209ENST00000489243 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
KDM4C-209ENST00000489243 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
KDM4C-209ENST00000489243 CLCN6P51797 869 aa11.12□□□□□ -0.63
KDM4C-209ENST00000489243 LAMC3Q9Y6N6 1575 aa11.12□□□□□ -0.63
KDM4C-209ENST00000489243 TOP2AP11388 1531 aaKnown RBP11.12□□□□□ -0.63
KDM4C-209ENST00000489243 MNX1P50219 401 aaPredicted RBP11.11□□□□□ -0.63
KDM4C-209ENST00000489243 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
KDM4C-209ENST00000489243 CUX2O14529 1486 aa11.09□□□□□ -0.63
KDM4C-209ENST00000489243 KIF21AQ7Z4S6 1674 aa11.09□□□□□ -0.63
KDM4C-209ENST00000489243 FKBP8Q14318 412 aa11.09□□□□□ -0.63
KDM4C-209ENST00000489243 THOC2Q8NI27 1593 aaKnown RBP11.08□□□□□ -0.64
KDM4C-209ENST00000489243 PDS5BQ9NTI5 1447 aa11.06□□□□□ -0.64
KDM4C-209ENST00000489243 PLEKHG5O94827 1062 aa11.06□□□□□ -0.64
KDM4C-209ENST00000489243 DCBLD2Q96PD2 775 aa11.02□□□□□ -0.64
KDM4C-209ENST00000489243 MIER1Q8N108 512 aa11.01□□□□□ -0.65
KDM4C-209ENST00000489243 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
KDM4C-209ENST00000489243 CCDC88BA6NC98 1476 aa11.01□□□□□ -0.65
KDM4C-209ENST00000489243 CFTRP13569 1480 aa11.01□□□□□ -0.65
KDM4C-209ENST00000489243 FANCD2Q9BXW9 1451 aa11.01□□□□□ -0.65
KDM4C-209ENST00000489243 MRC2Q9UBG0 1479 aa10.99□□□□□ -0.65
KDM4C-209ENST00000489243 CEP164Q9UPV0 1460 aa10.99□□□□□ -0.65
KDM4C-209ENST00000489243 GALR2O43603 387 aaPredicted RBP10.99□□□□□ -0.65
KDM4C-209ENST00000489243 POTEIP0CG38 1075 aa10.99□□□□□ -0.65
KDM4C-209ENST00000489243 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
KDM4C-209ENST00000489243 SUPT5HO00267 1087 aaKnown RBP10.95□□□□□ -0.66
KDM4C-209ENST00000489243 WDR62O43379 1518 aa10.95□□□□□ -0.66
KDM4C-209ENST00000489243 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
KDM4C-209ENST00000489243 LHX8Q68G74 356 aa10.92□□□□□ -0.66
KDM4C-209ENST00000489243 URB2Q14146 1524 aaKnown RBP10.92□□□□□ -0.66
KDM4C-209ENST00000489243 DNAJC5Q9H3Z4 198 aa10.92□□□□□ -0.66
KDM4C-209ENST00000489243 ZBTB47Q9UFB7 747 aaPredicted RBP10.89□□□□□ -0.67
KDM4C-209ENST00000489243 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
KDM4C-209ENST00000489243 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
KDM4C-209ENST00000489243 RASEFQ8IZ41 740 aa10.85□□□□□ -0.67
KDM4C-209ENST00000489243 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
KDM4C-209ENST00000489243 PRDM2Q13029 1718 aa10.83□□□□□ -0.68
KDM4C-209ENST00000489243 TOPBP1Q92547 1522 aa10.82□□□□□ -0.68
KDM4C-209ENST00000489243 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
KDM4C-209ENST00000489243 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
KDM4C-209ENST00000489243 DNMBPQ6XZF7 1577 aa10.76□□□□□ -0.69
KDM4C-209ENST00000489243 NUBP1P53384 320 aa10.75□□□□□ -0.69
KDM4C-209ENST00000489243 ASTLQ6HA08 431 aaPredicted RBP10.75□□□□□ -0.69
KDM4C-209ENST00000489243 FAM212AQ96EL1 285 aa10.75□□□□□ -0.69
KDM4C-209ENST00000489243 MAP3K13O43283 966 aa10.75□□□□□ -0.69
KDM4C-209ENST00000489243 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
KDM4C-209ENST00000489243 ATMINO43313 823 aaPredicted RBP10.74□□□□□ -0.69
KDM4C-209ENST00000489243 PELP1Q8IZL8 1130 aaKnown RBP10.73□□□□□ -0.69
KDM4C-209ENST00000489243 POLA1P09884 1462 aaPredicted RBP10.73□□□□□ -0.69
KDM4C-209ENST00000489243 RAD54L2Q9Y4B4 1467 aa10.73□□□□□ -0.69
KDM4C-209ENST00000489243 CUX1P39880 1505 aa10.71□□□□□ -0.69
KDM4C-209ENST00000489243 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
KDM4C-209ENST00000489243 VASPP50552 380 aaPredicted RBP10.7□□□□□ -0.7
KDM4C-209ENST00000489243 EIF4G3O43432 1585 aaKnown RBP10.7□□□□□ -0.7
KDM4C-209ENST00000489243 ABCC8Q09428 1581 aa10.7□□□□□ -0.7
KDM4C-209ENST00000489243 AQRO60306 1485 aaKnown RBP eCLIP10.7□□□□□ -0.7
KDM4C-209ENST00000489243 FGD5Q6ZNL6 1462 aa10.7□□□□□ -0.7
KDM4C-209ENST00000489243 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
KDM4C-209ENST00000489243 TRPC6Q9Y210 931 aa10.68□□□□□ -0.7
KDM4C-209ENST00000489243 TARBP1Q13395 1621 aaKnown RBP10.68□□□□□ -0.7
KDM4C-209ENST00000489243 ATN1P54259 1190 aaPredicted RBP10.67□□□□□ -0.7
KDM4C-209ENST00000489243 BMP2KQ9NSY1 1161 aaPredicted RBP10.67□□□□□ -0.7
KDM4C-209ENST00000489243 PCDHB13Q9Y5F0 798 aa10.67□□□□□ -0.7
KDM4C-209ENST00000489243 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
KDM4C-209ENST00000489243 SOGA1O94964 1423 aa10.66□□□□□ -0.7
KDM4C-209ENST00000489243 C7P10643 843 aa10.66□□□□□ -0.7
KDM4C-209ENST00000489243 TIE1P35590 1138 aa10.66□□□□□ -0.7
KDM4C-209ENST00000489243 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
KDM4C-209ENST00000489243 SGIP1Q9BQI5 828 aa10.64□□□□□ -0.71
KDM4C-209ENST00000489243 POTEB2H3BUK9 544 aa10.63□□□□□ -0.71
KDM4C-209ENST00000489243 DCAF8Q5TAQ9 597 aa10.63□□□□□ -0.71
KDM4C-209ENST00000489243 TRIM41Q8WV44 630 aa10.63□□□□□ -0.71
KDM4C-209ENST00000489243 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
KDM4C-209ENST00000489243 SNAPC4Q5SXM2 1469 aa10.6□□□□□ -0.71
KDM4C-209ENST00000489243 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
KDM4C-209ENST00000489243 OTUD5Q96G74 571 aa10.59□□□□□ -0.71
KDM4C-209ENST00000489243 SYNJ1O43426 1573 aa10.59□□□□□ -0.71
KDM4C-209ENST00000489243 WRNQ14191 1432 aaPredicted RBP eCLIP10.58□□□□□ -0.72
KDM4C-209ENST00000489243 PYGBP11216 843 aa10.58□□□□□ -0.72
KDM4C-209ENST00000489243 CHD1O14646 1710 aa10.56□□□□□ -0.72
KDM4C-209ENST00000489243 WDR97A6NE52 1622 aa10.56□□□□□ -0.72
KDM4C-209ENST00000489243 TRIM35Q9UPQ4 493 aa10.55□□□□□ -0.72
KDM4C-209ENST00000489243 GRIN2BQ13224 1484 aa10.53□□□□□ -0.72
KDM4C-209ENST00000489243 GAPVD1Q14C86 1478 aa10.53□□□□□ -0.72
KDM4C-209ENST00000489243 ABCA10Q8WWZ4 1543 aa10.53□□□□□ -0.72
KDM4C-209ENST00000489243 GSE1Q14687 1217 aa10.53□□□□□ -0.72
KDM4C-209ENST00000489243 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
KDM4C-209ENST00000489243 TOP2BQ02880 1626 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms