RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 CEP170Q5SW79 1584 aa29.41■■■□□ 2.3
C9orf16-203ENST00000489240 NUP160Q12769 1436 aa29.38■■■□□ 2.29
C9orf16-203ENST00000489240 KIAA0586Q9BVV6 1533 aa29.34■■■□□ 2.29
C9orf16-203ENST00000489240 IQGAP2Q13576 1575 aa29.33■■■□□ 2.29
C9orf16-203ENST00000489240 CEP162Q5TB80 1403 aa29.24■■■□□ 2.27
C9orf16-203ENST00000489240 CLASP1Q7Z460 1538 aa29.21■■■□□ 2.27
C9orf16-203ENST00000489240 OSCARQ8IYS5 282 aa29.18■■■□□ 2.26
C9orf16-203ENST00000489240 CLIP1P30622 1438 aa29.18■■■□□ 2.26
C9orf16-203ENST00000489240 UGGT2Q9NYU1 1516 aa29.17■■■□□ 2.26
C9orf16-203ENST00000489240 RANGAP1P46060 587 aaPredicted RBP29.15■■■□□ 2.26
C9orf16-203ENST00000489240 EFCAB5A4FU69 1503 aa29.15■■■□□ 2.26
C9orf16-203ENST00000489240 SHROOM2Q13796 1616 aa29.14■■■□□ 2.26
C9orf16-203ENST00000489240 SAMD9Q5K651 1589 aa29.12■■■□□ 2.25
C9orf16-203ENST00000489240 JPH4Q96JJ6 628 aa29.09■■■□□ 2.25
C9orf16-203ENST00000489240 ARHGAP35Q9NRY4 1499 aa29.07■■■□□ 2.24
C9orf16-203ENST00000489240 KIAA0556O60303 1618 aa29.03■■■□□ 2.24
C9orf16-203ENST00000489240 CARMIL2Q6F5E8 1435 aa29.01■■■□□ 2.23
C9orf16-203ENST00000489240 DISP1Q96F81 1524 aa29■■■□□ 2.23
C9orf16-203ENST00000489240 PRG4Q92954 1404 aaPredicted RBP28.98■■■□□ 2.23
C9orf16-203ENST00000489240 ARAP1Q96P48 1450 aa28.96■■■□□ 2.23
C9orf16-203ENST00000489240 P3H3Q8IVL6 736 aa28.93■■■□□ 2.22
C9orf16-203ENST00000489240 FHOD3Q2V2M9 1422 aa28.92■■■□□ 2.22
C9orf16-203ENST00000489240 ERCC6L2Q5T890 1561 aa28.86■■■□□ 2.21
C9orf16-203ENST00000489240 FMN1Q68DA7 1419 aa28.85■■■□□ 2.21
C9orf16-203ENST00000489240 VPS8Q8N3P4 1428 aa28.85■■■□□ 2.21
C9orf16-203ENST00000489240 PTPRGP23470 1445 aa28.74■■■□□ 2.19
C9orf16-203ENST00000489240 PCF11O94913 1555 aaKnown RBP28.73■■■□□ 2.19
C9orf16-203ENST00000489240 ARHGEF11O15085 1522 aa28.71■■■□□ 2.19
C9orf16-203ENST00000489240 TTBK1Q5TCY1 1321 aaPredicted RBP28.7■■■□□ 2.19
C9orf16-203ENST00000489240 RAPGEF6Q8TEU7 1601 aa28.7■■■□□ 2.19
C9orf16-203ENST00000489240 FYCO1Q9BQS8 1478 aa28.7■■■□□ 2.18
C9orf16-203ENST00000489240 CASKIN1Q8WXD9 1431 aa28.69■■■□□ 2.18
C9orf16-203ENST00000489240 RIMBP3CA6NJZ7 1639 aa28.68■■■□□ 2.18
C9orf16-203ENST00000489240 RIMBP3BA6NNM3 1639 aa28.68■■■□□ 2.18
C9orf16-203ENST00000489240 RIMBP3Q9UFD9 1639 aa28.68■■■□□ 2.18
C9orf16-203ENST00000489240 HECW1Q76N89 1606 aa28.67■■■□□ 2.18
C9orf16-203ENST00000489240 ABCA8O94911 1581 aa28.65■■■□□ 2.18
C9orf16-203ENST00000489240 PLB1Q6P1J6 1458 aa28.61■■■□□ 2.17
C9orf16-203ENST00000489240 LRRIQ1Q96JM4 1722 aa28.6■■■□□ 2.17
C9orf16-203ENST00000489240 ATP1B4Q9UN42 357 aaPredicted RBP28.58■■■□□ 2.17
C9orf16-203ENST00000489240 UACAQ9BZF9 1416 aa28.58■■■□□ 2.17
C9orf16-203ENST00000489240 APLP2Q06481 763 aa28.56■■■□□ 2.16
C9orf16-203ENST00000489240 CFAP43Q8NDM7 1665 aa28.54■■■□□ 2.16
C9orf16-203ENST00000489240 ABCC2Q92887 1545 aa28.53■■■□□ 2.16
C9orf16-203ENST00000489240 NUP153P49790 1475 aaKnown RBP28.53■■■□□ 2.16
C9orf16-203ENST00000489240 CCDC18Q5T9S5 1454 aa28.53■■■□□ 2.16
C9orf16-203ENST00000489240 MAP3K1Q13233 1512 aa28.52■■■□□ 2.16
C9orf16-203ENST00000489240 UHRF1BP1LA0JNW5 1464 aa28.52■■■□□ 2.16
C9orf16-203ENST00000489240 TIAM1Q13009 1591 aa28.5■■■□□ 2.15
C9orf16-203ENST00000489240 EPRSP07814 1512 aaKnown RBP28.49■■■□□ 2.15
C9orf16-203ENST00000489240 ADCY10Q96PN6 1610 aa28.47■■■□□ 2.15
C9orf16-203ENST00000489240 CDK13Q14004 1512 aaKnown RBP28.43■■■□□ 2.14
C9orf16-203ENST00000489240 ZCCHC11Q5TAX3 1644 aaKnown RBP28.39■■■□□ 2.13
C9orf16-203ENST00000489240 ATP10BO94823 1461 aa28.39■■■□□ 2.13
C9orf16-203ENST00000489240 KDM5BQ9UGL1 1544 aa28.38■■■□□ 2.13
C9orf16-203ENST00000489240 CYB5RLQ6IPT4 315 aa28.37■■■□□ 2.13
C9orf16-203ENST00000489240 ARID3CA6NKF2 412 aa28.36■■■□□ 2.13
C9orf16-203ENST00000489240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.35■■■□□ 2.13
C9orf16-203ENST00000489240 HNRNPUL2Q1KMD3 747 aaKnown RBP28.35■■■□□ 2.13
C9orf16-203ENST00000489240 DNAJC5Q9H3Z4 198 aa28.34■■■□□ 2.13
C9orf16-203ENST00000489240 CDK11AQ9UQ88 783 aaPredicted RBP28.33■■■□□ 2.13
C9orf16-203ENST00000489240 LRRC9Q6ZRR7 1453 aa28.33■■■□□ 2.13
C9orf16-203ENST00000489240 EHBP1L1Q8N3D4 1523 aa28.29■■■□□ 2.12
C9orf16-203ENST00000489240 MTUS2Q5JR59 1369 aa28.28■■■□□ 2.12
C9orf16-203ENST00000489240 NPM1P06748 294 aaKnown RBP eCLIP28.28■■■□□ 2.12
C9orf16-203ENST00000489240 KANK4Q5T7N3 995 aaPredicted RBP28.27■■■□□ 2.12
C9orf16-203ENST00000489240 MAGI3Q5TCQ9 1506 aa28.26■■■□□ 2.11
C9orf16-203ENST00000489240 SUPT6HQ7KZ85 1726 aaKnown RBP28.24■■■□□ 2.11
C9orf16-203ENST00000489240 PPARGC1BQ86YN6 1023 aaKnown RBP28.24■■■□□ 2.11
C9orf16-203ENST00000489240 PLEKHD1A6NEE1 506 aa28.23■■■□□ 2.11
C9orf16-203ENST00000489240 TROQ12816 1431 aaPredicted RBP28.21■■■□□ 2.11
C9orf16-203ENST00000489240 KIF14Q15058 1648 aa28.15■■■□□ 2.1
C9orf16-203ENST00000489240 WDR7Q9Y4E6 1490 aa28.12■■■□□ 2.09
C9orf16-203ENST00000489240 MAPKBP1O60336 1514 aa28.12■■■□□ 2.09
C9orf16-203ENST00000489240 ASXL2Q76L83 1435 aa28.11■■■□□ 2.09
C9orf16-203ENST00000489240 NCOA2Q15596 1464 aa28.09■■■□□ 2.09
C9orf16-203ENST00000489240 ITSN2Q9NZM3 1697 aa28.03■■■□□ 2.08
C9orf16-203ENST00000489240 KCNH8Q96L42 1107 aa28■■■□□ 2.07
C9orf16-203ENST00000489240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.99■■■□□ 2.078e-8■■□□□ 12
C9orf16-203ENST00000489240 CDC42BPAQ5VT25 1732 aa27.99■■■□□ 2.07
C9orf16-203ENST00000489240 ABCC10Q5T3U5 1492 aa27.99■■■□□ 2.07
C9orf16-203ENST00000489240 MYO5CQ9NQX4 1742 aa27.98■■■□□ 2.07
C9orf16-203ENST00000489240 TTC37Q6PGP7 1564 aa27.97■■■□□ 2.07
C9orf16-203ENST00000489240 PHLDB1Q86UU1 1377 aa27.97■■■□□ 2.07
C9orf16-203ENST00000489240 CCNB3Q8WWL7 1395 aa27.97■■■□□ 2.07
C9orf16-203ENST00000489240 ABCA9Q8IUA7 1624 aa27.96■■■□□ 2.07
C9orf16-203ENST00000489240 MYOM3Q5VTT5 1437 aa27.95■■■□□ 2.07
C9orf16-203ENST00000489240 PREX2Q70Z35 1606 aa27.92■■■□□ 2.06
C9orf16-203ENST00000489240 CDC42BPBQ9Y5S2 1711 aa27.9■■■□□ 2.06
C9orf16-203ENST00000489240 GPATCH8Q9UKJ3 1502 aaKnown RBP27.9■■■□□ 2.06
C9orf16-203ENST00000489240 GLI2P10070 1586 aa27.89■■■□□ 2.05
C9orf16-203ENST00000489240 DIP2BQ9P265 1576 aa27.88■■■□□ 2.05
C9orf16-203ENST00000489240 FGD6Q6ZV73 1430 aa27.87■■■□□ 2.05
C9orf16-203ENST00000489240 MIA2Q96PC5 1412 aa27.87■■■□□ 2.05
C9orf16-203ENST00000489240 RRBP1Q9P2E9 1410 aaKnown RBP27.86■■■□□ 2.05
C9orf16-203ENST00000489240 TRIM26Q12899 539 aaPredicted RBP27.86■■■□□ 2.05
C9orf16-203ENST00000489240 PTPN23Q9H3S7 1636 aa27.85■■■□□ 2.05
C9orf16-203ENST00000489240 KIF13AQ9H1H9 1805 aa27.84■■■□□ 2.05
C9orf16-203ENST00000489240 ARAP3Q8WWN8 1544 aa27.82■■■□□ 2.04
C9orf16-203ENST00000489240 MAP3K4Q9Y6R4 1608 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms