RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
SRRM1-216ENST00000489130 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
SRRM1-216ENST00000489130 JPH4Q96JJ6 628 aa21.69■■□□□ 1.06
SRRM1-216ENST00000489130 PRG4Q92954 1404 aaPredicted RBP21.69■■□□□ 1.06
SRRM1-216ENST00000489130 KIAA0586Q9BVV6 1533 aa21.65■■□□□ 1.06
SRRM1-216ENST00000489130 CARMIL1Q5VZK9 1371 aa21.64■■□□□ 1.06
SRRM1-216ENST00000489130 RAPGEF2Q9Y4G8 1499 aa21.48■■□□□ 1.03
SRRM1-216ENST00000489130 IQGAP2Q13576 1575 aa21.47■■□□□ 1.03
SRRM1-216ENST00000489130 ADCY10Q96PN6 1610 aa21.42■■□□□ 1.02
SRRM1-216ENST00000489130 CARMIL2Q6F5E8 1435 aa21.41■■□□□ 1.02
SRRM1-216ENST00000489130 PTPRGP23470 1445 aa21.38■■□□□ 1.01
SRRM1-216ENST00000489130 MAPKBP1O60336 1514 aa21.37■■□□□ 1.01
SRRM1-216ENST00000489130 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
SRRM1-216ENST00000489130 UGGT2Q9NYU1 1516 aa21.36■■□□□ 1.01
SRRM1-216ENST00000489130 DISP1Q96F81 1524 aa21.35■■□□□ 1.01
SRRM1-216ENST00000489130 NPM1P06748 294 aaKnown RBP eCLIP21.35■■□□□ 1.01
SRRM1-216ENST00000489130 PRXQ9BXM0 1461 aa21.34■■□□□ 1.01
SRRM1-216ENST00000489130 KIF13AQ9H1H9 1805 aa21.32■■□□□ 1
SRRM1-216ENST00000489130 ABCC10Q5T3U5 1492 aa21.31■■□□□ 1
SRRM1-216ENST00000489130 CTTNBP2Q8WZ74 1663 aa21.28■■□□□ 1
SRRM1-216ENST00000489130 KIAA0556O60303 1618 aa21.27■■□□□ 1
SRRM1-216ENST00000489130 DIP2BQ9P265 1576 aa21.26■□□□□ 0.99
SRRM1-216ENST00000489130 TTBK1Q5TCY1 1321 aaPredicted RBP21.26■□□□□ 0.99
SRRM1-216ENST00000489130 UHRF1BP1LA0JNW5 1464 aa21.26■□□□□ 0.99
SRRM1-216ENST00000489130 ABCC2Q92887 1545 aa21.25■□□□□ 0.99
SRRM1-216ENST00000489130 UACAQ9BZF9 1416 aa21.23■□□□□ 0.99
SRRM1-216ENST00000489130 FAM69CQ0P6D2 419 aa21.23■□□□□ 0.99
SRRM1-216ENST00000489130 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
SRRM1-216ENST00000489130 EEA1Q15075 1411 aa21.19■□□□□ 0.98
SRRM1-216ENST00000489130 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
SRRM1-216ENST00000489130 KDM5BQ9UGL1 1544 aa21.15■□□□□ 0.98
SRRM1-216ENST00000489130 PLB1Q6P1J6 1458 aa21.14■□□□□ 0.98
SRRM1-216ENST00000489130 ASXL2Q76L83 1435 aa21.14■□□□□ 0.98
SRRM1-216ENST00000489130 ZCCHC11Q5TAX3 1644 aaKnown RBP21.08■□□□□ 0.97
SRRM1-216ENST00000489130 GLI2P10070 1586 aa21.08■□□□□ 0.97
SRRM1-216ENST00000489130 ABCA8O94911 1581 aa21.06■□□□□ 0.96
SRRM1-216ENST00000489130 EPRSP07814 1512 aaKnown RBP21.03■□□□□ 0.96
SRRM1-216ENST00000489130 SAMD9Q5K651 1589 aa21.02■□□□□ 0.96
SRRM1-216ENST00000489130 TSPOAP1O95153 1857 aa21.01■□□□□ 0.95
SRRM1-216ENST00000489130 FAM9AQ8IZU1 332 aaPredicted RBP21■□□□□ 0.95
SRRM1-216ENST00000489130 WDR7Q9Y4E6 1490 aa21■□□□□ 0.95
SRRM1-216ENST00000489130 KIF21BO75037 1637 aa21■□□□□ 0.95
SRRM1-216ENST00000489130 KDM6BO15054 1643 aa20.99■□□□□ 0.95
SRRM1-216ENST00000489130 PPRC1Q5VV67 1664 aaKnown RBP20.97■□□□□ 0.95
SRRM1-216ENST00000489130 MAP3K4Q9Y6R4 1608 aa20.96■□□□□ 0.95
SRRM1-216ENST00000489130 P3H3Q8IVL6 736 aa20.95■□□□□ 0.94
SRRM1-216ENST00000489130 TEX14Q8IWB6 1497 aa20.88■□□□□ 0.93
SRRM1-216ENST00000489130 ATP10BO94823 1461 aa20.88■□□□□ 0.93
SRRM1-216ENST00000489130 RAPGEF6Q8TEU7 1601 aa20.86■□□□□ 0.93
SRRM1-216ENST00000489130 EFCAB5A4FU69 1503 aa20.86■□□□□ 0.93
SRRM1-216ENST00000489130 FHOD3Q2V2M9 1422 aa20.86■□□□□ 0.93
SRRM1-216ENST00000489130 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
SRRM1-216ENST00000489130 CFAP43Q8NDM7 1665 aa20.83■□□□□ 0.93
SRRM1-216ENST00000489130 MAGI3Q5TCQ9 1506 aa20.83■□□□□ 0.92
SRRM1-216ENST00000489130 COL17A1Q9UMD9 1497 aaPredicted RBP20.82■□□□□ 0.92
SRRM1-216ENST00000489130 CD109Q6YHK3 1445 aa20.82■□□□□ 0.92
SRRM1-216ENST00000489130 KCNH8Q96L42 1107 aa20.82■□□□□ 0.92
SRRM1-216ENST00000489130 NUP153P49790 1475 aaKnown RBP20.81■□□□□ 0.92
SRRM1-216ENST00000489130 ARID3CA6NKF2 412 aa20.81■□□□□ 0.92
SRRM1-216ENST00000489130 UBTFP17480 764 aaKnown RBP20.76■□□□□ 0.91
SRRM1-216ENST00000489130 ABCA9Q8IUA7 1624 aa20.74■□□□□ 0.91
SRRM1-216ENST00000489130 EHMT2Q96KQ7 1210 aa20.73■□□□□ 0.91
SRRM1-216ENST00000489130 ARHGAP35Q9NRY4 1499 aa20.7■□□□□ 0.9
SRRM1-216ENST00000489130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.7■□□□□ 0.9
SRRM1-216ENST00000489130 HNRNPUL2Q1KMD3 747 aaKnown RBP20.7■□□□□ 0.9
SRRM1-216ENST00000489130 KDM4FA0A1W2PPD8 638 aa20.67■□□□□ 0.9
SRRM1-216ENST00000489130 FMN1Q68DA7 1419 aa20.66■□□□□ 0.9
SRRM1-216ENST00000489130 ARAP3Q8WWN8 1544 aa20.65■□□□□ 0.9
SRRM1-216ENST00000489130 PLEKHD1A6NEE1 506 aa20.64■□□□□ 0.89
SRRM1-216ENST00000489130 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
SRRM1-216ENST00000489130 CDK13Q14004 1512 aaKnown RBP20.61■□□□□ 0.89
SRRM1-216ENST00000489130 NEO1Q92859 1461 aa20.61■□□□□ 0.89
SRRM1-216ENST00000489130 HECW1Q76N89 1606 aa20.6■□□□□ 0.89
SRRM1-216ENST00000489130 ADGRL1O94910 1474 aa20.58■□□□□ 0.89
SRRM1-216ENST00000489130 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.58■□□□□ 0.88
SRRM1-216ENST00000489130 TTC37Q6PGP7 1564 aa20.53■□□□□ 0.88
SRRM1-216ENST00000489130 ATP1B4Q9UN42 357 aaPredicted RBP20.51■□□□□ 0.87
SRRM1-216ENST00000489130 CFAP74Q9C0B2 1584 aa20.5■□□□□ 0.87
SRRM1-216ENST00000489130 FANCAO15360 1455 aa20.5■□□□□ 0.87
SRRM1-216ENST00000489130 RAPGEF3O95398 923 aa20.49■□□□□ 0.87
SRRM1-216ENST00000489130 FRMPD1Q5SYB0 1578 aa20.49■□□□□ 0.87
SRRM1-216ENST00000489130 CDK11AQ9UQ88 783 aaPredicted RBP20.48■□□□□ 0.87
SRRM1-216ENST00000489130 AKNAQ7Z591 1439 aa20.46■□□□□ 0.87
SRRM1-216ENST00000489130 CASKIN1Q8WXD9 1431 aa20.46■□□□□ 0.87
SRRM1-216ENST00000489130 PCF11O94913 1555 aaKnown RBP20.46■□□□□ 0.87
SRRM1-216ENST00000489130 LRRIQ1Q96JM4 1722 aa20.45■□□□□ 0.86
SRRM1-216ENST00000489130 PLCH2O75038 1416 aa20.44■□□□□ 0.86
SRRM1-216ENST00000489130 TROQ12816 1431 aaPredicted RBP20.44■□□□□ 0.86
SRRM1-216ENST00000489130 DENND4BO75064 1496 aaPredicted RBP20.44■□□□□ 0.86
SRRM1-216ENST00000489130 CLIP1P30622 1438 aa20.44■□□□□ 0.86
SRRM1-216ENST00000489130 CCDC18Q5T9S5 1454 aa20.43■□□□□ 0.86
SRRM1-216ENST00000489130 KIF14Q15058 1648 aa20.42■□□□□ 0.86
SRRM1-216ENST00000489130 RICTORQ6R327 1708 aa20.42■□□□□ 0.86
SRRM1-216ENST00000489130 FYCO1Q9BQS8 1478 aa20.4■□□□□ 0.86
SRRM1-216ENST00000489130 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
SRRM1-216ENST00000489130 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
SRRM1-216ENST00000489130 ARHGEF40Q8TER5 1519 aa20.37■□□□□ 0.85
SRRM1-216ENST00000489130 EFCAB2Q5VUJ9 269 aa20.34■□□□□ 0.85
SRRM1-216ENST00000489130 POGZQ7Z3K3 1410 aa20.34■□□□□ 0.85
SRRM1-216ENST00000489130 SCAPERQ9BY12 1400 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms