RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 FBLN2P98095 1184 aa15.84■□□□□ 0.13
USP11-211ENST00000489111 CTTNBP2Q8WZ74 1663 aa15.8■□□□□ 0.12
USP11-211ENST00000489111 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
USP11-211ENST00000489111 IQGAP2Q13576 1575 aa15.77■□□□□ 0.11
USP11-211ENST00000489111 EFCAB5A4FU69 1503 aa15.77■□□□□ 0.11
USP11-211ENST00000489111 ARAP1Q96P48 1450 aa15.77■□□□□ 0.11
USP11-211ENST00000489111 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.11
USP11-211ENST00000489111 KIAA0586Q9BVV6 1533 aa15.76■□□□□ 0.11
USP11-211ENST00000489111 NUP160Q12769 1436 aa15.75■□□□□ 0.11
USP11-211ENST00000489111 CEP170Q5SW79 1584 aa15.72■□□□□ 0.11
USP11-211ENST00000489111 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
USP11-211ENST00000489111 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
USP11-211ENST00000489111 UGGT2Q9NYU1 1516 aa15.68■□□□□ 0.1
USP11-211ENST00000489111 SAMD9Q5K651 1589 aa15.68■□□□□ 0.1
USP11-211ENST00000489111 CHD1O14646 1710 aa15.65■□□□□ 0.1
USP11-211ENST00000489111 APLP2Q06481 763 aa15.65■□□□□ 0.1
USP11-211ENST00000489111 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
USP11-211ENST00000489111 CARMIL2Q6F5E8 1435 aa15.61■□□□□ 0.09
USP11-211ENST00000489111 JPH4Q96JJ6 628 aa15.6■□□□□ 0.09
USP11-211ENST00000489111 KIAA0556O60303 1618 aa15.6■□□□□ 0.09
USP11-211ENST00000489111 DISP1Q96F81 1524 aa15.59■□□□□ 0.09
USP11-211ENST00000489111 FYCO1Q9BQS8 1478 aa15.58■□□□□ 0.08
USP11-211ENST00000489111 CASKIN1Q8WXD9 1431 aa15.57■□□□□ 0.08
USP11-211ENST00000489111 PCF11O94913 1555 aaKnown RBP15.57■□□□□ 0.08
USP11-211ENST00000489111 PPARGC1BQ86YN6 1023 aaKnown RBP15.56■□□□□ 0.08
USP11-211ENST00000489111 CLASP1Q7Z460 1538 aa15.55■□□□□ 0.08
USP11-211ENST00000489111 PRG4Q92954 1404 aaPredicted RBP15.55■□□□□ 0.08
USP11-211ENST00000489111 ATP1B4Q9UN42 357 aaPredicted RBP15.55■□□□□ 0.08
USP11-211ENST00000489111 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
USP11-211ENST00000489111 SHROOM2Q13796 1616 aa15.5■□□□□ 0.07
USP11-211ENST00000489111 MAP3K1Q13233 1512 aa15.49■□□□□ 0.07
USP11-211ENST00000489111 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
USP11-211ENST00000489111 TRIM26Q12899 539 aaPredicted RBP15.48■□□□□ 0.07
USP11-211ENST00000489111 TIAM1Q13009 1591 aa15.48■□□□□ 0.07
USP11-211ENST00000489111 HECW1Q76N89 1606 aa15.47■□□□□ 0.07
USP11-211ENST00000489111 CCDC18Q5T9S5 1454 aa15.46■□□□□ 0.06
USP11-211ENST00000489111 PTPRGP23470 1445 aa15.44■□□□□ 0.06
USP11-211ENST00000489111 CFAP43Q8NDM7 1665 aa15.44■□□□□ 0.06
USP11-211ENST00000489111 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
USP11-211ENST00000489111 RAPGEF6Q8TEU7 1601 aa15.42■□□□□ 0.06
USP11-211ENST00000489111 PLB1Q6P1J6 1458 aa15.41■□□□□ 0.06
USP11-211ENST00000489111 LRRC9Q6ZRR7 1453 aa15.41■□□□□ 0.06
USP11-211ENST00000489111 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
USP11-211ENST00000489111 EPRSP07814 1512 aaKnown RBP15.4■□□□□ 0.06
USP11-211ENST00000489111 NUP153P49790 1475 aaKnown RBP15.4■□□□□ 0.06
USP11-211ENST00000489111 MTUS2Q5JR59 1369 aa15.39■□□□□ 0.05
USP11-211ENST00000489111 ERCC6L2Q5T890 1561 aa15.39■□□□□ 0.05
USP11-211ENST00000489111 ABCA8O94911 1581 aa15.37■□□□□ 0.05
USP11-211ENST00000489111 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
USP11-211ENST00000489111 CDK13Q14004 1512 aaKnown RBP15.36■□□□□ 0.05
USP11-211ENST00000489111 EHBP1L1Q8N3D4 1523 aa15.35■□□□□ 0.05
USP11-211ENST00000489111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
USP11-211ENST00000489111 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
USP11-211ENST00000489111 UACAQ9BZF9 1416 aa15.34■□□□□ 0.05
USP11-211ENST00000489111 CDK11AQ9UQ88 783 aaPredicted RBP15.33■□□□□ 0.04
USP11-211ENST00000489111 ABCC2Q92887 1545 aa15.3■□□□□ 0.04
USP11-211ENST00000489111 LRRIQ1Q96JM4 1722 aa15.29■□□□□ 0.04
USP11-211ENST00000489111 MAGI3Q5TCQ9 1506 aa15.27■□□□□ 0.04
USP11-211ENST00000489111 UHRF1BP1LA0JNW5 1464 aa15.27■□□□□ 0.04
USP11-211ENST00000489111 ATP10BO94823 1461 aa15.27■□□□□ 0.03
USP11-211ENST00000489111 NCOA2Q15596 1464 aa15.27■□□□□ 0.03
USP11-211ENST00000489111 PHLDB1Q86UU1 1377 aa15.26■□□□□ 0.03
USP11-211ENST00000489111 TROQ12816 1431 aaPredicted RBP15.26■□□□□ 0.03
USP11-211ENST00000489111 RRBP1Q9P2E9 1410 aaKnown RBP15.25■□□□□ 0.03
USP11-211ENST00000489111 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
USP11-211ENST00000489111 SUPT6HQ7KZ85 1726 aaKnown RBP15.24■□□□□ 0.03
USP11-211ENST00000489111 PLEKHD1A6NEE1 506 aa15.23■□□□□ 0.03
USP11-211ENST00000489111 ARHGEF11O15085 1522 aa15.22■□□□□ 0.03
USP11-211ENST00000489111 MYOM3Q5VTT5 1437 aa15.2■□□□□ 0.02
USP11-211ENST00000489111 FGD6Q6ZV73 1430 aa15.19■□□□□ 0.02
USP11-211ENST00000489111 KDM5BQ9UGL1 1544 aa15.19■□□□□ 0.02
USP11-211ENST00000489111 FAM50AQ14320 339 aaKnown RBP15.17■□□□□ 0.02
USP11-211ENST00000489111 KIF14Q15058 1648 aa15.17■□□□□ 0.02
USP11-211ENST00000489111 ADCY10Q96PN6 1610 aa15.17■□□□□ 0.02
USP11-211ENST00000489111 ZCCHC11Q5TAX3 1644 aaKnown RBP15.14■□□□□ 0.01
USP11-211ENST00000489111 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
USP11-211ENST00000489111 MIA2Q96PC5 1412 aa15.13■□□□□ 0.01
USP11-211ENST00000489111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.12■□□□□ 0.01
USP11-211ENST00000489111 RIMBP3CA6NJZ7 1639 aa15.11■□□□□ 0.01
USP11-211ENST00000489111 RIMBP3BA6NNM3 1639 aa15.11■□□□□ 0.01
USP11-211ENST00000489111 RIMBP3Q9UFD9 1639 aa15.11■□□□□ 0.01
USP11-211ENST00000489111 ITGAEP38570 1179 aa15.1■□□□□ 0.01
USP11-211ENST00000489111 ABCC10Q5T3U5 1492 aa15.09■□□□□ 0.01
USP11-211ENST00000489111 WDR7Q9Y4E6 1490 aa15.09■□□□□ 0.01
USP11-211ENST00000489111 TCOF1Q13428 1488 aaKnown RBP15.08■□□□□ 0.01
USP11-211ENST00000489111 PTPN23Q9H3S7 1636 aa15.08■□□□□ 0
USP11-211ENST00000489111 CFDP1Q9UEE9 299 aaPredicted RBP15.08■□□□□ 0
USP11-211ENST00000489111 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
USP11-211ENST00000489111 ITSN2Q9NZM3 1697 aa15.07■□□□□ 0
USP11-211ENST00000489111 CYB5RLQ6IPT4 315 aa15.07■□□□□ 0
USP11-211ENST00000489111 KCNH8Q96L42 1107 aa15.06■□□□□ 0
USP11-211ENST00000489111 ASXL2Q76L83 1435 aa15.06■□□□□ 0
USP11-211ENST00000489111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.03■□□□□ -0
USP11-211ENST00000489111 TTC37Q6PGP7 1564 aa15.02■□□□□ -0
USP11-211ENST00000489111 ZNF777Q9ULD5 760 aaPredicted RBP15.02■□□□□ -0
USP11-211ENST00000489111 CAMSAP2Q08AD1 1489 aa15.01□□□□□ -0.01
USP11-211ENST00000489111 ZNF644Q9H582 1327 aaPredicted RBP14.99□□□□□ -0.01
USP11-211ENST00000489111 ARHGAP5Q13017 1502 aa14.99□□□□□ -0.01
USP11-211ENST00000489111 PREX2Q70Z35 1606 aa14.99□□□□□ -0.01
USP11-211ENST00000489111 CDC42BPAQ5VT25 1732 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms