RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 RAPGEF2Q9Y4G8 1499 aa25.31■■□□□ 1.64
CYTH3-209ENST00000488964 JPH4Q96JJ6 628 aa25.3■■□□□ 1.64
CYTH3-209ENST00000488964 PRG4Q92954 1404 aaPredicted RBP25.26■■□□□ 1.63
CYTH3-209ENST00000488964 EEA1Q15075 1411 aa25.24■■□□□ 1.63
CYTH3-209ENST00000488964 ERCC6L2Q5T890 1561 aa25.2■■□□□ 1.62
CYTH3-209ENST00000488964 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
CYTH3-209ENST00000488964 CSRNP3Q8WYN3 585 aa25.14■■□□□ 1.62
CYTH3-209ENST00000488964 PRXQ9BXM0 1461 aa25.14■■□□□ 1.61
CYTH3-209ENST00000488964 CARMIL2Q6F5E8 1435 aa25.13■■□□□ 1.61
CYTH3-209ENST00000488964 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
CYTH3-209ENST00000488964 CTTNBP2Q8WZ74 1663 aa25.07■■□□□ 1.6
CYTH3-209ENST00000488964 UGGT2Q9NYU1 1516 aa25.01■■□□□ 1.59
CYTH3-209ENST00000488964 TRHP20396 242 aaPredicted RBP25■■□□□ 1.59
CYTH3-209ENST00000488964 FAM9AQ8IZU1 332 aaPredicted RBP25■■□□□ 1.59
CYTH3-209ENST00000488964 TNIKQ9UKE5 1360 aa25■■□□□ 1.59
CYTH3-209ENST00000488964 PTPRGP23470 1445 aa24.98■■□□□ 1.59
CYTH3-209ENST00000488964 NPM1P06748 294 aaKnown RBP eCLIP24.97■■□□□ 1.59
CYTH3-209ENST00000488964 GOLGA3Q08378 1498 aa24.96■■□□□ 1.59
CYTH3-209ENST00000488964 DISP1Q96F81 1524 aa24.92■■□□□ 1.58
CYTH3-209ENST00000488964 TTBK1Q5TCY1 1321 aaPredicted RBP24.91■■□□□ 1.58
CYTH3-209ENST00000488964 KIAA0556O60303 1618 aa24.91■■□□□ 1.58
CYTH3-209ENST00000488964 KIF21BO75037 1637 aa24.9■■□□□ 1.58
CYTH3-209ENST00000488964 ADCY10Q96PN6 1610 aa24.86■■□□□ 1.57
CYTH3-209ENST00000488964 UACAQ9BZF9 1416 aa24.8■■□□□ 1.56
CYTH3-209ENST00000488964 UHRF1BP1LA0JNW5 1464 aa24.78■■□□□ 1.56
CYTH3-209ENST00000488964 MAPKBP1O60336 1514 aa24.76■■□□□ 1.55
CYTH3-209ENST00000488964 ABCC2Q92887 1545 aa24.76■■□□□ 1.55
CYTH3-209ENST00000488964 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
CYTH3-209ENST00000488964 SAMD9Q5K651 1589 aa24.69■■□□□ 1.54
CYTH3-209ENST00000488964 RANGAP1P46060 587 aaPredicted RBP24.67■■□□□ 1.54
CYTH3-209ENST00000488964 EFCAB5A4FU69 1503 aa24.66■■□□□ 1.54
CYTH3-209ENST00000488964 P3H3Q8IVL6 736 aa24.66■■□□□ 1.54
CYTH3-209ENST00000488964 EHMT2Q96KQ7 1210 aa24.66■■□□□ 1.54
CYTH3-209ENST00000488964 ABCC10Q5T3U5 1492 aa24.64■■□□□ 1.54
CYTH3-209ENST00000488964 PLB1Q6P1J6 1458 aa24.64■■□□□ 1.53
CYTH3-209ENST00000488964 KDM5BQ9UGL1 1544 aa24.63■■□□□ 1.53
CYTH3-209ENST00000488964 FAM69CQ0P6D2 419 aa24.62■■□□□ 1.53
CYTH3-209ENST00000488964 ABCA8O94911 1581 aa24.62■■□□□ 1.53
CYTH3-209ENST00000488964 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
CYTH3-209ENST00000488964 ASXL2Q76L83 1435 aa24.6■■□□□ 1.53
CYTH3-209ENST00000488964 DIP2BQ9P265 1576 aa24.59■■□□□ 1.53
CYTH3-209ENST00000488964 ZCCHC11Q5TAX3 1644 aaKnown RBP24.59■■□□□ 1.53
CYTH3-209ENST00000488964 FHOD3Q2V2M9 1422 aa24.55■■□□□ 1.52
CYTH3-209ENST00000488964 RAPGEF6Q8TEU7 1601 aa24.52■■□□□ 1.52
CYTH3-209ENST00000488964 WDR7Q9Y4E6 1490 aa24.49■■□□□ 1.51
CYTH3-209ENST00000488964 GLI2P10070 1586 aa24.46■■□□□ 1.51
CYTH3-209ENST00000488964 FMN1Q68DA7 1419 aa24.45■■□□□ 1.51
CYTH3-209ENST00000488964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.43■■□□□ 1.5
CYTH3-209ENST00000488964 HNRNPUL2Q1KMD3 747 aaKnown RBP24.43■■□□□ 1.5
CYTH3-209ENST00000488964 EPRSP07814 1512 aaKnown RBP24.43■■□□□ 1.5
CYTH3-209ENST00000488964 TSPOAP1O95153 1857 aa24.42■■□□□ 1.5
CYTH3-209ENST00000488964 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
CYTH3-209ENST00000488964 ARID3CA6NKF2 412 aa24.41■■□□□ 1.5
CYTH3-209ENST00000488964 ATP10BO94823 1461 aa24.4■■□□□ 1.5
CYTH3-209ENST00000488964 NUP153P49790 1475 aaKnown RBP24.37■■□□□ 1.49
CYTH3-209ENST00000488964 TEX14Q8IWB6 1497 aa24.35■■□□□ 1.49
CYTH3-209ENST00000488964 KCNH8Q96L42 1107 aa24.35■■□□□ 1.49
CYTH3-209ENST00000488964 HECW1Q76N89 1606 aa24.33■■□□□ 1.49
CYTH3-209ENST00000488964 MAP3K4Q9Y6R4 1608 aa24.33■■□□□ 1.49
CYTH3-209ENST00000488964 CLIP1P30622 1438 aa24.32■■□□□ 1.48
CYTH3-209ENST00000488964 ATP1B4Q9UN42 357 aaPredicted RBP24.31■■□□□ 1.48
CYTH3-209ENST00000488964 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
CYTH3-209ENST00000488964 PLEKHD1A6NEE1 506 aa24.3■■□□□ 1.48
CYTH3-209ENST00000488964 KDM6BO15054 1643 aa24.28■■□□□ 1.48
CYTH3-209ENST00000488964 CD109Q6YHK3 1445 aa24.27■■□□□ 1.48
CYTH3-209ENST00000488964 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
CYTH3-209ENST00000488964 PPRC1Q5VV67 1664 aaKnown RBP24.23■■□□□ 1.47
CYTH3-209ENST00000488964 MAGI3Q5TCQ9 1506 aa24.21■■□□□ 1.47
CYTH3-209ENST00000488964 CDK13Q14004 1512 aaKnown RBP24.2■■□□□ 1.46
CYTH3-209ENST00000488964 ABCA9Q8IUA7 1624 aa24.19■■□□□ 1.46
CYTH3-209ENST00000488964 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
CYTH3-209ENST00000488964 CCDC18Q5T9S5 1454 aa24.18■■□□□ 1.46
CYTH3-209ENST00000488964 CEP162Q5TB80 1403 aa24.17■■□□□ 1.46
CYTH3-209ENST00000488964 FYCO1Q9BQS8 1478 aa24.16■■□□□ 1.46
CYTH3-209ENST00000488964 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
CYTH3-209ENST00000488964 PHLDB1Q86UU1 1377 aa24.12■■□□□ 1.45
CYTH3-209ENST00000488964 TROQ12816 1431 aaPredicted RBP24.07■■□□□ 1.44
CYTH3-209ENST00000488964 KIF14Q15058 1648 aa24.06■■□□□ 1.44
CYTH3-209ENST00000488964 LOC105371045A0A1W2PR82 267 aa24.06■■□□□ 1.44
CYTH3-209ENST00000488964 NEO1Q92859 1461 aa24.05■■□□□ 1.44
CYTH3-209ENST00000488964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.05■■□□□ 1.44
CYTH3-209ENST00000488964 CFAP74Q9C0B2 1584 aa24.04■■□□□ 1.44
CYTH3-209ENST00000488964 LRRIQ1Q96JM4 1722 aa24.02■■□□□ 1.44
CYTH3-209ENST00000488964 TTC37Q6PGP7 1564 aa24■■□□□ 1.43
CYTH3-209ENST00000488964 ARAP3Q8WWN8 1544 aa24■■□□□ 1.43
CYTH3-209ENST00000488964 COL17A1Q9UMD9 1497 aaPredicted RBP23.98■■□□□ 1.43
CYTH3-209ENST00000488964 FANCAO15360 1455 aa23.97■■□□□ 1.43
CYTH3-209ENST00000488964 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
CYTH3-209ENST00000488964 PLCH2O75038 1416 aa23.93■■□□□ 1.42
CYTH3-209ENST00000488964 AKNAQ7Z591 1439 aa23.92■■□□□ 1.42
CYTH3-209ENST00000488964 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
CYTH3-209ENST00000488964 EFCAB2Q5VUJ9 269 aa23.91■■□□□ 1.42
CYTH3-209ENST00000488964 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
CYTH3-209ENST00000488964 DENND4BO75064 1496 aaPredicted RBP23.88■■□□□ 1.41
CYTH3-209ENST00000488964 ARHGAP5Q13017 1502 aa23.88■■□□□ 1.41
CYTH3-209ENST00000488964 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
CYTH3-209ENST00000488964 ADGRL1O94910 1474 aa23.85■■□□□ 1.41
CYTH3-209ENST00000488964 EHBP1L1Q8N3D4 1523 aa23.84■■□□□ 1.41
CYTH3-209ENST00000488964 RAPGEF3O95398 923 aa23.83■■□□□ 1.41
CYTH3-209ENST00000488964 PREX2Q70Z35 1606 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms