RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 KIAA0586Q9BVV6 1533 aa18.72■□□□□ 0.59
ARHGEF39-204ENST00000488918 RAPGEF2Q9Y4G8 1499 aa18.71■□□□□ 0.59
ARHGEF39-204ENST00000488918 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
ARHGEF39-204ENST00000488918 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
ARHGEF39-204ENST00000488918 NPM1P06748 294 aaKnown RBP eCLIP18.66■□□□□ 0.58
ARHGEF39-204ENST00000488918 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF39-204ENST00000488918 CARMIL2Q6F5E8 1435 aa18.65■□□□□ 0.58
ARHGEF39-204ENST00000488918 ERCC6L2Q5T890 1561 aa18.63■□□□□ 0.57
ARHGEF39-204ENST00000488918 FAM9AQ8IZU1 332 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF39-204ENST00000488918 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
ARHGEF39-204ENST00000488918 EEA1Q15075 1411 aa18.59■□□□□ 0.57
ARHGEF39-204ENST00000488918 IQGAP2Q13576 1575 aa18.59■□□□□ 0.57
ARHGEF39-204ENST00000488918 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
ARHGEF39-204ENST00000488918 PTPRGP23470 1445 aa18.55■□□□□ 0.56
ARHGEF39-204ENST00000488918 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
ARHGEF39-204ENST00000488918 PRXQ9BXM0 1461 aa18.51■□□□□ 0.55
ARHGEF39-204ENST00000488918 GOLGA3Q08378 1498 aa18.46■□□□□ 0.55
ARHGEF39-204ENST00000488918 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
ARHGEF39-204ENST00000488918 CTTNBP2Q8WZ74 1663 aa18.43■□□□□ 0.54
ARHGEF39-204ENST00000488918 RANGAP1P46060 587 aaPredicted RBP18.42■□□□□ 0.54
ARHGEF39-204ENST00000488918 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
ARHGEF39-204ENST00000488918 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
ARHGEF39-204ENST00000488918 DISP1Q96F81 1524 aa18.39■□□□□ 0.54
ARHGEF39-204ENST00000488918 UACAQ9BZF9 1416 aa18.38■□□□□ 0.53
ARHGEF39-204ENST00000488918 FAM69CQ0P6D2 419 aa18.37■□□□□ 0.53
ARHGEF39-204ENST00000488918 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
ARHGEF39-204ENST00000488918 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
ARHGEF39-204ENST00000488918 ADCY10Q96PN6 1610 aa18.35■□□□□ 0.53
ARHGEF39-204ENST00000488918 ABCC2Q92887 1545 aa18.32■□□□□ 0.52
ARHGEF39-204ENST00000488918 MAPKBP1O60336 1514 aa18.3■□□□□ 0.52
ARHGEF39-204ENST00000488918 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
ARHGEF39-204ENST00000488918 KIF21BO75037 1637 aa18.29■□□□□ 0.52
ARHGEF39-204ENST00000488918 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
ARHGEF39-204ENST00000488918 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
ARHGEF39-204ENST00000488918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF39-204ENST00000488918 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
ARHGEF39-204ENST00000488918 ASXL2Q76L83 1435 aa18.24■□□□□ 0.51
ARHGEF39-204ENST00000488918 ARID3CA6NKF2 412 aa18.21■□□□□ 0.51
ARHGEF39-204ENST00000488918 KDM5BQ9UGL1 1544 aa18.2■□□□□ 0.5
ARHGEF39-204ENST00000488918 KCNH8Q96L42 1107 aa18.18■□□□□ 0.5
ARHGEF39-204ENST00000488918 DIP2BQ9P265 1576 aa18.17■□□□□ 0.5
ARHGEF39-204ENST00000488918 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF39-204ENST00000488918 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
ARHGEF39-204ENST00000488918 FHOD3Q2V2M9 1422 aa18.16■□□□□ 0.5
ARHGEF39-204ENST00000488918 SAMD9Q5K651 1589 aa18.16■□□□□ 0.5
ARHGEF39-204ENST00000488918 ABCA8O94911 1581 aa18.15■□□□□ 0.5
ARHGEF39-204ENST00000488918 ZCCHC11Q5TAX3 1644 aaKnown RBP18.15■□□□□ 0.5
ARHGEF39-204ENST00000488918 KIF13AQ9H1H9 1805 aa18.14■□□□□ 0.5
ARHGEF39-204ENST00000488918 WDR7Q9Y4E6 1490 aa18.13■□□□□ 0.49
ARHGEF39-204ENST00000488918 EPRSP07814 1512 aaKnown RBP18.09■□□□□ 0.49
ARHGEF39-204ENST00000488918 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
ARHGEF39-204ENST00000488918 PLEKHD1A6NEE1 506 aa18.08■□□□□ 0.48
ARHGEF39-204ENST00000488918 FMN1Q68DA7 1419 aa18.07■□□□□ 0.48
ARHGEF39-204ENST00000488918 GLI2P10070 1586 aa18.07■□□□□ 0.48
ARHGEF39-204ENST00000488918 TSPOAP1O95153 1857 aa18.06■□□□□ 0.48
ARHGEF39-204ENST00000488918 TEX14Q8IWB6 1497 aa18.06■□□□□ 0.48
ARHGEF39-204ENST00000488918 ATP10BO94823 1461 aa18.05■□□□□ 0.48
ARHGEF39-204ENST00000488918 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
ARHGEF39-204ENST00000488918 CD109Q6YHK3 1445 aa18.02■□□□□ 0.48
ARHGEF39-204ENST00000488918 KDM6BO15054 1643 aa18■□□□□ 0.47
ARHGEF39-204ENST00000488918 NUP153P49790 1475 aaKnown RBP18■□□□□ 0.47
ARHGEF39-204ENST00000488918 ARHGAP35Q9NRY4 1499 aa18■□□□□ 0.47
ARHGEF39-204ENST00000488918 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
ARHGEF39-204ENST00000488918 CLIP1P30622 1438 aa17.97■□□□□ 0.47
ARHGEF39-204ENST00000488918 MAP3K4Q9Y6R4 1608 aa17.95■□□□□ 0.46
ARHGEF39-204ENST00000488918 HECW1Q76N89 1606 aa17.94■□□□□ 0.46
ARHGEF39-204ENST00000488918 CFAP43Q8NDM7 1665 aa17.93■□□□□ 0.46
ARHGEF39-204ENST00000488918 MAGI3Q5TCQ9 1506 aa17.9■□□□□ 0.46
ARHGEF39-204ENST00000488918 CDK13Q14004 1512 aaKnown RBP17.88■□□□□ 0.45
ARHGEF39-204ENST00000488918 PHLDB1Q86UU1 1377 aa17.87■□□□□ 0.45
ARHGEF39-204ENST00000488918 PPRC1Q5VV67 1664 aaKnown RBP17.85■□□□□ 0.45
ARHGEF39-204ENST00000488918 ABCA9Q8IUA7 1624 aa17.84■□□□□ 0.45
ARHGEF39-204ENST00000488918 CCDC18Q5T9S5 1454 aa17.84■□□□□ 0.45
ARHGEF39-204ENST00000488918 CASKIN1Q8WXD9 1431 aa17.84■□□□□ 0.45
ARHGEF39-204ENST00000488918 LOC105371045A0A1W2PR82 267 aa17.83■□□□□ 0.44
ARHGEF39-204ENST00000488918 CEP162Q5TB80 1403 aa17.82■□□□□ 0.44
ARHGEF39-204ENST00000488918 FYCO1Q9BQS8 1478 aa17.81■□□□□ 0.44
ARHGEF39-204ENST00000488918 NEO1Q92859 1461 aa17.8■□□□□ 0.44
ARHGEF39-204ENST00000488918 TROQ12816 1431 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF39-204ENST00000488918 PCF11O94913 1555 aaKnown RBP17.78■□□□□ 0.44
ARHGEF39-204ENST00000488918 EFCAB2Q5VUJ9 269 aa17.77■□□□□ 0.44
ARHGEF39-204ENST00000488918 FANCAO15360 1455 aa17.76■□□□□ 0.43
ARHGEF39-204ENST00000488918 COL17A1Q9UMD9 1497 aaPredicted RBP17.76■□□□□ 0.43
ARHGEF39-204ENST00000488918 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.76■□□□□ 0.43
ARHGEF39-204ENST00000488918 KIF14Q15058 1648 aa17.76■□□□□ 0.43
ARHGEF39-204ENST00000488918 ARAP3Q8WWN8 1544 aa17.75■□□□□ 0.43
ARHGEF39-204ENST00000488918 CFAP74Q9C0B2 1584 aa17.74■□□□□ 0.43
ARHGEF39-204ENST00000488918 RAPGEF3O95398 923 aa17.74■□□□□ 0.43
ARHGEF39-204ENST00000488918 AKNAQ7Z591 1439 aa17.73■□□□□ 0.43
ARHGEF39-204ENST00000488918 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
ARHGEF39-204ENST00000488918 MTUS2Q5JR59 1369 aa17.73■□□□□ 0.43
ARHGEF39-204ENST00000488918 PLCH2O75038 1416 aa17.72■□□□□ 0.43
ARHGEF39-204ENST00000488918 TTC37Q6PGP7 1564 aa17.71■□□□□ 0.43
ARHGEF39-204ENST00000488918 DENND4BO75064 1496 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF39-204ENST00000488918 APLP2Q06481 763 aa17.7■□□□□ 0.42
ARHGEF39-204ENST00000488918 ARID4BQ4LE39 1312 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF39-204ENST00000488918 ARHGAP5Q13017 1502 aa17.68■□□□□ 0.42
ARHGEF39-204ENST00000488918 ADGRL1O94910 1474 aa17.67■□□□□ 0.42
ARHGEF39-204ENST00000488918 ZNF777Q9ULD5 760 aaPredicted RBP17.66■□□□□ 0.42
ARHGEF39-204ENST00000488918 SCAPERQ9BY12 1400 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms