RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 CUL7Q14999 1698 aa28.82■■■□□ 2.2
COL16A1-215ENST00000488897 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
COL16A1-215ENST00000488897 CEP170Q5SW79 1584 aa28.73■■■□□ 2.19
COL16A1-215ENST00000488897 KIF21BO75037 1637 aa28.68■■■□□ 2.18
COL16A1-215ENST00000488897 GOLGA3Q08378 1498 aa28.67■■■□□ 2.18
COL16A1-215ENST00000488897 TTBK1Q5TCY1 1321 aaPredicted RBP28.67■■■□□ 2.18
COL16A1-215ENST00000488897 P3H3Q8IVL6 736 aa28.64■■■□□ 2.18
COL16A1-215ENST00000488897 NUP160Q12769 1436 aa28.6■■■□□ 2.17
COL16A1-215ENST00000488897 ZEB1P37275 1124 aaPredicted RBP28.56■■■□□ 2.16
COL16A1-215ENST00000488897 JPH4Q96JJ6 628 aa28.55■■■□□ 2.16
COL16A1-215ENST00000488897 KIAA0586Q9BVV6 1533 aa28.48■■■□□ 2.15
COL16A1-215ENST00000488897 ERCC6L2Q5T890 1561 aa28.47■■■□□ 2.15
COL16A1-215ENST00000488897 CTTNBP2Q8WZ74 1663 aa28.46■■■□□ 2.15
COL16A1-215ENST00000488897 CLASP1Q7Z460 1538 aa28.45■■■□□ 2.14
COL16A1-215ENST00000488897 IQGAP2Q13576 1575 aa28.44■■■□□ 2.14
COL16A1-215ENST00000488897 TNIKQ9UKE5 1360 aa28.44■■■□□ 2.14
COL16A1-215ENST00000488897 PRG4Q92954 1404 aaPredicted RBP28.4■■■□□ 2.14
COL16A1-215ENST00000488897 CEP162Q5TB80 1403 aa28.34■■■□□ 2.13
COL16A1-215ENST00000488897 FHOD3Q2V2M9 1422 aa28.3■■■□□ 2.12
COL16A1-215ENST00000488897 DISP1Q96F81 1524 aa28.3■■■□□ 2.12
COL16A1-215ENST00000488897 CLIP1P30622 1438 aa28.3■■■□□ 2.12
COL16A1-215ENST00000488897 ARID3CA6NKF2 412 aa28.28■■■□□ 2.12
COL16A1-215ENST00000488897 ARHGAP35Q9NRY4 1499 aa28.27■■■□□ 2.12
COL16A1-215ENST00000488897 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
COL16A1-215ENST00000488897 SHROOM2Q13796 1616 aa28.24■■■□□ 2.11
COL16A1-215ENST00000488897 DNAJC5Q9H3Z4 198 aa28.23■■■□□ 2.11
COL16A1-215ENST00000488897 ARHGEF11O15085 1522 aa28.23■■■□□ 2.11
COL16A1-215ENST00000488897 UGGT2Q9NYU1 1516 aa28.23■■■□□ 2.11
COL16A1-215ENST00000488897 ATP1B4Q9UN42 357 aaPredicted RBP28.21■■■□□ 2.11
COL16A1-215ENST00000488897 ARAP1Q96P48 1450 aa28.2■■■□□ 2.1
COL16A1-215ENST00000488897 KIAA0556O60303 1618 aa28.17■■■□□ 2.1
COL16A1-215ENST00000488897 RIMBP3CA6NJZ7 1639 aa28.16■■■□□ 2.1
COL16A1-215ENST00000488897 RIMBP3BA6NNM3 1639 aa28.16■■■□□ 2.1
COL16A1-215ENST00000488897 RIMBP3Q9UFD9 1639 aa28.16■■■□□ 2.1
COL16A1-215ENST00000488897 CARMIL2Q6F5E8 1435 aa28.15■■■□□ 2.1
COL16A1-215ENST00000488897 SAMD9Q5K651 1589 aa28.13■■■□□ 2.09
COL16A1-215ENST00000488897 PTPRGP23470 1445 aa28.1■■■□□ 2.09
COL16A1-215ENST00000488897 PLB1Q6P1J6 1458 aa28.06■■■□□ 2.08
COL16A1-215ENST00000488897 EFCAB5A4FU69 1503 aa28.01■■■□□ 2.07
COL16A1-215ENST00000488897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.93■■■□□ 2.06
COL16A1-215ENST00000488897 HNRNPUL2Q1KMD3 747 aaKnown RBP27.93■■■□□ 2.06
COL16A1-215ENST00000488897 PCF11O94913 1555 aaKnown RBP27.87■■■□□ 2.05
COL16A1-215ENST00000488897 UACAQ9BZF9 1416 aa27.86■■■□□ 2.05
COL16A1-215ENST00000488897 FMN1Q68DA7 1419 aa27.85■■■□□ 2.05
COL16A1-215ENST00000488897 VPS8Q8N3P4 1428 aa27.85■■■□□ 2.05
COL16A1-215ENST00000488897 ADCY10Q96PN6 1610 aa27.82■■■□□ 2.04
COL16A1-215ENST00000488897 CDK13Q14004 1512 aaKnown RBP27.81■■■□□ 2.04
COL16A1-215ENST00000488897 NUP153P49790 1475 aaKnown RBP27.81■■■□□ 2.04
COL16A1-215ENST00000488897 ABCA8O94911 1581 aa27.8■■■□□ 2.04
COL16A1-215ENST00000488897 RAPGEF6Q8TEU7 1601 aa27.8■■■□□ 2.04
COL16A1-215ENST00000488897 LRRIQ1Q96JM4 1722 aa27.77■■■□□ 2.04
COL16A1-215ENST00000488897 CASKIN1Q8WXD9 1431 aa27.75■■■□□ 2.03
COL16A1-215ENST00000488897 KANK4Q5T7N3 995 aaPredicted RBP27.75■■■□□ 2.03
COL16A1-215ENST00000488897 ABCC2Q92887 1545 aa27.73■■■□□ 2.03
COL16A1-215ENST00000488897 CCER1Q8TC90 406 aaPredicted RBP27.72■■■□□ 2.03
COL16A1-215ENST00000488897 ATP10BO94823 1461 aa27.72■■■□□ 2.03
COL16A1-215ENST00000488897 KCNH8Q96L42 1107 aa27.71■■■□□ 2.03
COL16A1-215ENST00000488897 NPM1P06748 294 aaKnown RBP eCLIP27.69■■■□□ 2.02
COL16A1-215ENST00000488897 EPRSP07814 1512 aaKnown RBP27.68■■■□□ 2.02
COL16A1-215ENST00000488897 FYCO1Q9BQS8 1478 aa27.66■■■□□ 2.02
COL16A1-215ENST00000488897 APLP2Q06481 763 aa27.65■■■□□ 2.02
COL16A1-215ENST00000488897 HECW1Q76N89 1606 aa27.63■■■□□ 2.01
COL16A1-215ENST00000488897 ZCCHC11Q5TAX3 1644 aaKnown RBP27.63■■■□□ 2.01
COL16A1-215ENST00000488897 UHRF1BP1LA0JNW5 1464 aa27.61■■■□□ 2.01
COL16A1-215ENST00000488897 MAGI3Q5TCQ9 1506 aa27.6■■■□□ 2.01
COL16A1-215ENST00000488897 KDM5BQ9UGL1 1544 aa27.59■■■□□ 2.01
COL16A1-215ENST00000488897 PLEKHD1A6NEE1 506 aa27.56■■■□□ 2
COL16A1-215ENST00000488897 ASXL2Q76L83 1435 aa27.54■■■□□ 2
COL16A1-215ENST00000488897 TIAM1Q13009 1591 aa27.5■■□□□ 1.99
COL16A1-215ENST00000488897 MTUS2Q5JR59 1369 aa27.5■■□□□ 1.99
COL16A1-215ENST00000488897 TRHP20396 242 aaPredicted RBP27.47■■□□□ 1.99
COL16A1-215ENST00000488897 CCDC18Q5T9S5 1454 aa27.46■■□□□ 1.99
COL16A1-215ENST00000488897 CDK11AQ9UQ88 783 aaPredicted RBP27.44■■□□□ 1.98
COL16A1-215ENST00000488897 FAM69CQ0P6D2 419 aa27.43■■□□□ 1.98
COL16A1-215ENST00000488897 LRRC9Q6ZRR7 1453 aa27.43■■□□□ 1.98
COL16A1-215ENST00000488897 KIF14Q15058 1648 aa27.42■■□□□ 1.98
COL16A1-215ENST00000488897 CFAP43Q8NDM7 1665 aa27.41■■□□□ 1.98
COL16A1-215ENST00000488897 WDR7Q9Y4E6 1490 aa27.4■■□□□ 1.98
COL16A1-215ENST00000488897 TROQ12816 1431 aaPredicted RBP27.37■■□□□ 1.97
COL16A1-215ENST00000488897 MAPKBP1O60336 1514 aa27.32■■□□□ 1.96
COL16A1-215ENST00000488897 SCAF1Q9H7N4 1312 aaKnown RBP27.31■■□□□ 1.96
COL16A1-215ENST00000488897 ZNF777Q9ULD5 760 aaPredicted RBP27.3■■□□□ 1.96
COL16A1-215ENST00000488897 PHLDB1Q86UU1 1377 aa27.29■■□□□ 1.96
COL16A1-215ENST00000488897 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
COL16A1-215ENST00000488897 TTC37Q6PGP7 1564 aa27.28■■□□□ 1.96
COL16A1-215ENST00000488897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.28■■□□□ 1.96
COL16A1-215ENST00000488897 MAP3K1Q13233 1512 aa27.27■■□□□ 1.96
COL16A1-215ENST00000488897 ZNF644Q9H582 1327 aaPredicted RBP27.26■■□□□ 1.95
COL16A1-215ENST00000488897 DIEXFQ68CQ4 756 aaKnown RBP27.26■■□□□ 1.95
COL16A1-215ENST00000488897 EHBP1L1Q8N3D4 1523 aa27.25■■□□□ 1.95
COL16A1-215ENST00000488897 TSPOAP1O95153 1857 aa27.24■■□□□ 1.95
COL16A1-215ENST00000488897 ABCC10Q5T3U5 1492 aa27.24■■□□□ 1.95
COL16A1-215ENST00000488897 DIP2BQ9P265 1576 aa27.22■■□□□ 1.95
COL16A1-215ENST00000488897 KIF13AQ9H1H9 1805 aa27.2■■□□□ 1.94
COL16A1-215ENST00000488897 CCNB3Q8WWL7 1395 aa27.19■■□□□ 1.94
COL16A1-215ENST00000488897 SUPT6HQ7KZ85 1726 aaKnown RBP27.18■■□□□ 1.94
COL16A1-215ENST00000488897 CD109Q6YHK3 1445 aa27.18■■□□□ 1.94
COL16A1-215ENST00000488897 CFDP1Q9UEE9 299 aaPredicted RBP27.16■■□□□ 1.94
COL16A1-215ENST00000488897 GPATCH8Q9UKJ3 1502 aaKnown RBP27.15■■□□□ 1.94
COL16A1-215ENST00000488897 ITGAEP38570 1179 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms