RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 SYNJ2O15056 1496 aa18.63■□□□□ 0.57
NUP98-212ENST00000488828 CHD1O14646 1710 aa18.63■□□□□ 0.57
NUP98-212ENST00000488828 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
NUP98-212ENST00000488828 ERICH3Q5RHP9 1530 aa18.56■□□□□ 0.56
NUP98-212ENST00000488828 FHAD1B1AJZ9 1412 aa18.56■□□□□ 0.56
NUP98-212ENST00000488828 IGF1RP08069 1367 aa18.54■□□□□ 0.56
NUP98-212ENST00000488828 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
NUP98-212ENST00000488828 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
NUP98-212ENST00000488828 CARMIL1Q5VZK9 1371 aa18.45■□□□□ 0.54
NUP98-212ENST00000488828 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
NUP98-212ENST00000488828 CYB5RLQ6IPT4 315 aa18.43■□□□□ 0.54
NUP98-212ENST00000488828 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
NUP98-212ENST00000488828 ARHGEF11O15085 1522 aa18.42■□□□□ 0.54
NUP98-212ENST00000488828 CLASP1Q7Z460 1538 aa18.4■□□□□ 0.54
NUP98-212ENST00000488828 FAM9AQ8IZU1 332 aaPredicted RBP18.4■□□□□ 0.54
NUP98-212ENST00000488828 RIMBP3CA6NJZ7 1639 aa18.4■□□□□ 0.54
NUP98-212ENST00000488828 RIMBP3BA6NNM3 1639 aa18.4■□□□□ 0.54
NUP98-212ENST00000488828 RIMBP3Q9UFD9 1639 aa18.4■□□□□ 0.54
NUP98-212ENST00000488828 CUL7Q14999 1698 aa18.38■□□□□ 0.53
NUP98-212ENST00000488828 NUP160Q12769 1436 aa18.38■□□□□ 0.53
NUP98-212ENST00000488828 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
NUP98-212ENST00000488828 JPH4Q96JJ6 628 aa18.35■□□□□ 0.53
NUP98-212ENST00000488828 CSRNP3Q8WYN3 585 aa18.34■□□□□ 0.53
NUP98-212ENST00000488828 RAPGEF2Q9Y4G8 1499 aa18.31■□□□□ 0.52
NUP98-212ENST00000488828 PRG4Q92954 1404 aaPredicted RBP18.27■□□□□ 0.52
NUP98-212ENST00000488828 KIAA0586Q9BVV6 1533 aa18.27■□□□□ 0.51
NUP98-212ENST00000488828 SLC4A1APQ9BWU0 796 aaKnown RBP18.26■□□□□ 0.51
NUP98-212ENST00000488828 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
NUP98-212ENST00000488828 EEA1Q15075 1411 aa18.24■□□□□ 0.51
NUP98-212ENST00000488828 TTBK1Q5TCY1 1321 aaPredicted RBP18.23■□□□□ 0.51
NUP98-212ENST00000488828 ERCC6L2Q5T890 1561 aa18.21■□□□□ 0.51
NUP98-212ENST00000488828 SHROOM2Q13796 1616 aa18.19■□□□□ 0.5
NUP98-212ENST00000488828 PRXQ9BXM0 1461 aa18.19■□□□□ 0.5
NUP98-212ENST00000488828 CARMIL2Q6F5E8 1435 aa18.15■□□□□ 0.5
NUP98-212ENST00000488828 IQGAP2Q13576 1575 aa18.14■□□□□ 0.49
NUP98-212ENST00000488828 RANGAP1P46060 587 aaPredicted RBP18.14■□□□□ 0.49
NUP98-212ENST00000488828 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
NUP98-212ENST00000488828 UBTFP17480 764 aaKnown RBP18.11■□□□□ 0.49
NUP98-212ENST00000488828 NPM1P06748 294 aaKnown RBP eCLIP18.09■□□□□ 0.49
NUP98-212ENST00000488828 PTPRGP23470 1445 aa18.08■□□□□ 0.49
NUP98-212ENST00000488828 P3H3Q8IVL6 736 aa18.06■□□□□ 0.48
NUP98-212ENST00000488828 TNIKQ9UKE5 1360 aa18.05■□□□□ 0.48
NUP98-212ENST00000488828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.04■□□□□ 0.48
NUP98-212ENST00000488828 CTTNBP2Q8WZ74 1663 aa18.03■□□□□ 0.48
NUP98-212ENST00000488828 UGGT2Q9NYU1 1516 aa18.02■□□□□ 0.47
NUP98-212ENST00000488828 DISP1Q96F81 1524 aa18.01■□□□□ 0.47
NUP98-212ENST00000488828 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
NUP98-212ENST00000488828 KIF21BO75037 1637 aa17.98■□□□□ 0.47
NUP98-212ENST00000488828 SLC4A2P04920 1241 aa17.97■□□□□ 0.47
NUP98-212ENST00000488828 KIAA0556O60303 1618 aa17.94■□□□□ 0.46
NUP98-212ENST00000488828 UACAQ9BZF9 1416 aa17.91■□□□□ 0.46
NUP98-212ENST00000488828 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
NUP98-212ENST00000488828 ADCY10Q96PN6 1610 aa17.88■□□□□ 0.45
NUP98-212ENST00000488828 ARID3CA6NKF2 412 aa17.86■□□□□ 0.45
NUP98-212ENST00000488828 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
NUP98-212ENST00000488828 FAM69CQ0P6D2 419 aa17.84■□□□□ 0.45
NUP98-212ENST00000488828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
NUP98-212ENST00000488828 HNRNPUL2Q1KMD3 747 aaKnown RBP17.83■□□□□ 0.44
NUP98-212ENST00000488828 ABCC2Q92887 1545 aa17.82■□□□□ 0.44
NUP98-212ENST00000488828 UHRF1BP1LA0JNW5 1464 aa17.82■□□□□ 0.44
NUP98-212ENST00000488828 FHOD3Q2V2M9 1422 aa17.82■□□□□ 0.44
NUP98-212ENST00000488828 ATP1B4Q9UN42 357 aaPredicted RBP17.82■□□□□ 0.44
NUP98-212ENST00000488828 SAMD9Q5K651 1589 aa17.79■□□□□ 0.44
NUP98-212ENST00000488828 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
NUP98-212ENST00000488828 EFCAB5A4FU69 1503 aa17.77■□□□□ 0.43
NUP98-212ENST00000488828 KCNH8Q96L42 1107 aa17.76■□□□□ 0.43
NUP98-212ENST00000488828 ASXL2Q76L83 1435 aa17.75■□□□□ 0.43
NUP98-212ENST00000488828 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
NUP98-212ENST00000488828 MAPKBP1O60336 1514 aa17.75■□□□□ 0.43
NUP98-212ENST00000488828 KDM5BQ9UGL1 1544 aa17.74■□□□□ 0.43
NUP98-212ENST00000488828 ABCA8O94911 1581 aa17.74■□□□□ 0.43
NUP98-212ENST00000488828 ABCC10Q5T3U5 1492 aa17.72■□□□□ 0.43
NUP98-212ENST00000488828 ARHGAP35Q9NRY4 1499 aa17.71■□□□□ 0.43
NUP98-212ENST00000488828 ZCCHC11Q5TAX3 1644 aaKnown RBP17.7■□□□□ 0.42
NUP98-212ENST00000488828 FOXD4L1Q9NU39 408 aa17.69■□□□□ 0.42
NUP98-212ENST00000488828 CLIP1P30622 1438 aa17.69■□□□□ 0.42
NUP98-212ENST00000488828 FMN1Q68DA7 1419 aa17.68■□□□□ 0.42
NUP98-212ENST00000488828 RAPGEF6Q8TEU7 1601 aa17.68■□□□□ 0.42
NUP98-212ENST00000488828 ATP10BO94823 1461 aa17.68■□□□□ 0.42
NUP98-212ENST00000488828 PLEKHD1A6NEE1 506 aa17.66■□□□□ 0.42
NUP98-212ENST00000488828 ZBTB22O15209 634 aa17.66■□□□□ 0.42
NUP98-212ENST00000488828 C1QBPQ07021 282 aaKnown RBP17.66■□□□□ 0.42
NUP98-212ENST00000488828 DIP2BQ9P265 1576 aa17.64■□□□□ 0.41
NUP98-212ENST00000488828 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
NUP98-212ENST00000488828 KIF13AQ9H1H9 1805 aa17.63■□□□□ 0.41
NUP98-212ENST00000488828 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
NUP98-212ENST00000488828 EPRSP07814 1512 aaKnown RBP17.61■□□□□ 0.41
NUP98-212ENST00000488828 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
NUP98-212ENST00000488828 CEP162Q5TB80 1403 aa17.58■□□□□ 0.41
NUP98-212ENST00000488828 TSPOAP1O95153 1857 aa17.58■□□□□ 0.4
NUP98-212ENST00000488828 CACNB1Q02641 598 aaPredicted RBP17.56■□□□□ 0.4
NUP98-212ENST00000488828 GLI2P10070 1586 aa17.55■□□□□ 0.4
NUP98-212ENST00000488828 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
NUP98-212ENST00000488828 HECW1Q76N89 1606 aa17.54■□□□□ 0.4
NUP98-212ENST00000488828 CDK13Q14004 1512 aaKnown RBP17.53■□□□□ 0.4
NUP98-212ENST00000488828 MYCNP04198 464 aaPredicted RBP17.53■□□□□ 0.4
NUP98-212ENST00000488828 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
NUP98-212ENST00000488828 TEX14Q8IWB6 1497 aa17.48■□□□□ 0.39
NUP98-212ENST00000488828 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
NUP98-212ENST00000488828 MAP3K4Q9Y6R4 1608 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms