RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 KIF21BO75037 1637 aa28.14■■■□□ 2.09
CDK5RAP1-214ENST00000488723 SHROOM2Q13796 1616 aa28.11■■■□□ 2.09
CDK5RAP1-214ENST00000488723 ARHGEF11O15085 1522 aa28.09■■■□□ 2.09
CDK5RAP1-214ENST00000488723 IQGAP2Q13576 1575 aa28.05■■■□□ 2.08
CDK5RAP1-214ENST00000488723 RIMBP3CA6NJZ7 1639 aa28.03■■■□□ 2.08
CDK5RAP1-214ENST00000488723 RIMBP3BA6NNM3 1639 aa28.03■■■□□ 2.08
CDK5RAP1-214ENST00000488723 RIMBP3Q9UFD9 1639 aa28.03■■■□□ 2.08
CDK5RAP1-214ENST00000488723 CTTNBP2Q8WZ74 1663 aa28■■■□□ 2.07
CDK5RAP1-214ENST00000488723 PRG4Q92954 1404 aaPredicted RBP28■■■□□ 2.07
CDK5RAP1-214ENST00000488723 GOLGA3Q08378 1498 aa27.99■■■□□ 2.07
CDK5RAP1-214ENST00000488723 UGGT2Q9NYU1 1516 aa27.95■■■□□ 2.06
CDK5RAP1-214ENST00000488723 CARMIL2Q6F5E8 1435 aa27.92■■■□□ 2.06
CDK5RAP1-214ENST00000488723 UBTFP17480 764 aaKnown RBP27.9■■■□□ 2.06
CDK5RAP1-214ENST00000488723 ERCC6L2Q5T890 1561 aa27.88■■■□□ 2.05
CDK5RAP1-214ENST00000488723 ARAP1Q96P48 1450 aa27.88■■■□□ 2.05
CDK5RAP1-214ENST00000488723 CYB5RLQ6IPT4 315 aa27.84■■■□□ 2.05
CDK5RAP1-214ENST00000488723 DISP1Q96F81 1524 aa27.83■■■□□ 2.05
CDK5RAP1-214ENST00000488723 TNIKQ9UKE5 1360 aa27.79■■■□□ 2.04
CDK5RAP1-214ENST00000488723 KIAA0556O60303 1618 aa27.75■■■□□ 2.03
CDK5RAP1-214ENST00000488723 EHMT2Q96KQ7 1210 aa27.75■■■□□ 2.03
CDK5RAP1-214ENST00000488723 PTPRGP23470 1445 aa27.75■■■□□ 2.03
CDK5RAP1-214ENST00000488723 SAMD9Q5K651 1589 aa27.7■■■□□ 2.03
CDK5RAP1-214ENST00000488723 EFCAB5A4FU69 1503 aa27.68■■■□□ 2.02
CDK5RAP1-214ENST00000488723 RANGAP1P46060 587 aaPredicted RBP27.59■■■□□ 2.01
CDK5RAP1-214ENST00000488723 LOC105371045A0A1W2PR82 267 aa27.57■■■□□ 2
CDK5RAP1-214ENST00000488723 P3H3Q8IVL6 736 aa27.57■■■□□ 2
CDK5RAP1-214ENST00000488723 UACAQ9BZF9 1416 aa27.57■■■□□ 2
CDK5RAP1-214ENST00000488723 UHRF1BP1LA0JNW5 1464 aa27.56■■■□□ 2
CDK5RAP1-214ENST00000488723 ARHGAP35Q9NRY4 1499 aa27.54■■■□□ 2
CDK5RAP1-214ENST00000488723 TTBK1Q5TCY1 1321 aaPredicted RBP27.53■■■□□ 2
CDK5RAP1-214ENST00000488723 CLIP1P30622 1438 aa27.5■■□□□ 1.99
CDK5RAP1-214ENST00000488723 FHOD3Q2V2M9 1422 aa27.5■■□□□ 1.99
CDK5RAP1-214ENST00000488723 NPM1P06748 294 aaKnown RBP eCLIP27.49■■□□□ 1.99
CDK5RAP1-214ENST00000488723 ADCY10Q96PN6 1610 aa27.49■■□□□ 1.99
CDK5RAP1-214ENST00000488723 ABCC2Q92887 1545 aa27.48■■□□□ 1.99
CDK5RAP1-214ENST00000488723 ABCA8O94911 1581 aa27.47■■□□□ 1.99
CDK5RAP1-214ENST00000488723 FMN1Q68DA7 1419 aa27.45■■□□□ 1.98
CDK5RAP1-214ENST00000488723 PLB1Q6P1J6 1458 aa27.44■■□□□ 1.98
CDK5RAP1-214ENST00000488723 CEP162Q5TB80 1403 aa27.42■■□□□ 1.98
CDK5RAP1-214ENST00000488723 KDM5BQ9UGL1 1544 aa27.4■■□□□ 1.98
CDK5RAP1-214ENST00000488723 RAPGEF6Q8TEU7 1601 aa27.36■■□□□ 1.97
CDK5RAP1-214ENST00000488723 MAPKBP1O60336 1514 aa27.33■■□□□ 1.97
CDK5RAP1-214ENST00000488723 NUP153P49790 1475 aaKnown RBP27.27■■□□□ 1.96
CDK5RAP1-214ENST00000488723 ZCCHC11Q5TAX3 1644 aaKnown RBP27.26■■□□□ 1.95
CDK5RAP1-214ENST00000488723 ATP10BO94823 1461 aa27.25■■□□□ 1.95
CDK5RAP1-214ENST00000488723 CASKIN1Q8WXD9 1431 aa27.24■■□□□ 1.95
CDK5RAP1-214ENST00000488723 ASXL2Q76L83 1435 aa27.21■■□□□ 1.95
CDK5RAP1-214ENST00000488723 HECW1Q76N89 1606 aa27.2■■□□□ 1.95
CDK5RAP1-214ENST00000488723 FYCO1Q9BQS8 1478 aa27.18■■□□□ 1.94
CDK5RAP1-214ENST00000488723 ABCC10Q5T3U5 1492 aa27.17■■□□□ 1.94
CDK5RAP1-214ENST00000488723 TRHP20396 242 aaPredicted RBP27.15■■□□□ 1.94
CDK5RAP1-214ENST00000488723 EPRSP07814 1512 aaKnown RBP27.15■■□□□ 1.94
CDK5RAP1-214ENST00000488723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.94
CDK5RAP1-214ENST00000488723 HNRNPUL2Q1KMD3 747 aaKnown RBP27.14■■□□□ 1.94
CDK5RAP1-214ENST00000488723 ATP1B4Q9UN42 357 aaPredicted RBP27.14■■□□□ 1.94
CDK5RAP1-214ENST00000488723 WDR7Q9Y4E6 1490 aa27.13■■□□□ 1.93
CDK5RAP1-214ENST00000488723 CDK11AQ9UQ88 783 aaPredicted RBP27.12■■□□□ 1.93
CDK5RAP1-214ENST00000488723 PCF11O94913 1555 aaKnown RBP27.12■■□□□ 1.93
CDK5RAP1-214ENST00000488723 VPS8Q8N3P4 1428 aa27.11■■□□□ 1.93
CDK5RAP1-214ENST00000488723 PLEKHD1A6NEE1 506 aa27.11■■□□□ 1.93
CDK5RAP1-214ENST00000488723 ARID3CA6NKF2 412 aa27.11■■□□□ 1.93
CDK5RAP1-214ENST00000488723 CCDC18Q5T9S5 1454 aa27.11■■□□□ 1.93
CDK5RAP1-214ENST00000488723 FAM69CQ0P6D2 419 aa27.08■■□□□ 1.93
CDK5RAP1-214ENST00000488723 GLI2P10070 1586 aa27.06■■□□□ 1.92
CDK5RAP1-214ENST00000488723 DIP2BQ9P265 1576 aa27.06■■□□□ 1.92
CDK5RAP1-214ENST00000488723 CDK13Q14004 1512 aaKnown RBP27.04■■□□□ 1.92
CDK5RAP1-214ENST00000488723 KIF13AQ9H1H9 1805 aa27.04■■□□□ 1.92
CDK5RAP1-214ENST00000488723 LRRIQ1Q96JM4 1722 aa27.01■■□□□ 1.91
CDK5RAP1-214ENST00000488723 KCNH8Q96L42 1107 aa27■■□□□ 1.91
CDK5RAP1-214ENST00000488723 TROQ12816 1431 aaPredicted RBP26.94■■□□□ 1.9
CDK5RAP1-214ENST00000488723 MAP3K1Q13233 1512 aa26.92■■□□□ 1.9
CDK5RAP1-214ENST00000488723 CFAP43Q8NDM7 1665 aa26.89■■□□□ 1.9
CDK5RAP1-214ENST00000488723 ABCA9Q8IUA7 1624 aa26.89■■□□□ 1.9
CDK5RAP1-214ENST00000488723 MAP3K4Q9Y6R4 1608 aa26.89■■□□□ 1.9
CDK5RAP1-214ENST00000488723 CD109Q6YHK3 1445 aa26.87■■□□□ 1.89
CDK5RAP1-214ENST00000488723 APLP2Q06481 763 aa26.85■■□□□ 1.89
CDK5RAP1-214ENST00000488723 MAGI3Q5TCQ9 1506 aa26.83■■□□□ 1.89
CDK5RAP1-214ENST00000488723 TIAM1Q13009 1591 aa26.83■■□□□ 1.89
CDK5RAP1-214ENST00000488723 MTUS2Q5JR59 1369 aa26.83■■□□□ 1.88
CDK5RAP1-214ENST00000488723 TEX14Q8IWB6 1497 aa26.81■■□□□ 1.88
CDK5RAP1-214ENST00000488723 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.81■■□□□ 1.88
CDK5RAP1-214ENST00000488723 KIF14Q15058 1648 aa26.81■■□□□ 1.88
CDK5RAP1-214ENST00000488723 TSPOAP1O95153 1857 aa26.77■■□□□ 1.88
CDK5RAP1-214ENST00000488723 EHBP1L1Q8N3D4 1523 aa26.77■■□□□ 1.88
CDK5RAP1-214ENST00000488723 PHLDB1Q86UU1 1377 aa26.76■■□□□ 1.87
CDK5RAP1-214ENST00000488723 PPRC1Q5VV67 1664 aaKnown RBP26.76■■□□□ 1.87
CDK5RAP1-214ENST00000488723 LRRC9Q6ZRR7 1453 aa26.74■■□□□ 1.87
CDK5RAP1-214ENST00000488723 PLCH2O75038 1416 aa26.73■■□□□ 1.87
CDK5RAP1-214ENST00000488723 TTC37Q6PGP7 1564 aa26.72■■□□□ 1.87
CDK5RAP1-214ENST00000488723 ARAP3Q8WWN8 1544 aa26.72■■□□□ 1.87
CDK5RAP1-214ENST00000488723 NEO1Q92859 1461 aa26.68■■□□□ 1.86
CDK5RAP1-214ENST00000488723 KANK4Q5T7N3 995 aaPredicted RBP26.67■■□□□ 1.86
CDK5RAP1-214ENST00000488723 MYO5CQ9NQX4 1742 aa26.66■■□□□ 1.86
CDK5RAP1-214ENST00000488723 EFCAB2Q5VUJ9 269 aa26.65■■□□□ 1.86
CDK5RAP1-214ENST00000488723 SUPT6HQ7KZ85 1726 aaKnown RBP26.65■■□□□ 1.86
CDK5RAP1-214ENST00000488723 CFAP74Q9C0B2 1584 aa26.63■■□□□ 1.85
CDK5RAP1-214ENST00000488723 FANCAO15360 1455 aa26.62■■□□□ 1.85
CDK5RAP1-214ENST00000488723 CCNB3Q8WWL7 1395 aa26.62■■□□□ 1.85
CDK5RAP1-214ENST00000488723 GPATCH8Q9UKJ3 1502 aaKnown RBP26.61■■□□□ 1.85
CDK5RAP1-214ENST00000488723 NCOA2Q15596 1464 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms