RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
CEACAM1-212ENST00000488639 PRXQ9BXM0 1461 aa19.43■□□□□ 0.7
CEACAM1-212ENST00000488639 RAPGEF2Q9Y4G8 1499 aa19.43■□□□□ 0.7
CEACAM1-212ENST00000488639 NUP160Q12769 1436 aa19.41■□□□□ 0.7
CEACAM1-212ENST00000488639 KIF21BO75037 1637 aa19.37■□□□□ 0.69
CEACAM1-212ENST00000488639 CLASP1Q7Z460 1538 aa19.37■□□□□ 0.69
CEACAM1-212ENST00000488639 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
CEACAM1-212ENST00000488639 KIAA0586Q9BVV6 1533 aa19.3■□□□□ 0.68
CEACAM1-212ENST00000488639 FAM9AQ8IZU1 332 aaPredicted RBP19.3■□□□□ 0.68
CEACAM1-212ENST00000488639 CTTNBP2Q8WZ74 1663 aa19.29■□□□□ 0.68
CEACAM1-212ENST00000488639 SHROOM2Q13796 1616 aa19.26■□□□□ 0.67
CEACAM1-212ENST00000488639 DNAJC5Q9H3Z4 198 aa19.26■□□□□ 0.67
CEACAM1-212ENST00000488639 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
CEACAM1-212ENST00000488639 IQGAP2Q13576 1575 aa19.24■□□□□ 0.67
CEACAM1-212ENST00000488639 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
CEACAM1-212ENST00000488639 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
CEACAM1-212ENST00000488639 UGGT2Q9NYU1 1516 aa19.15■□□□□ 0.66
CEACAM1-212ENST00000488639 RIMBP3CA6NJZ7 1639 aa19.13■□□□□ 0.65
CEACAM1-212ENST00000488639 RIMBP3BA6NNM3 1639 aa19.13■□□□□ 0.65
CEACAM1-212ENST00000488639 RIMBP3Q9UFD9 1639 aa19.13■□□□□ 0.65
CEACAM1-212ENST00000488639 PRG4Q92954 1404 aaPredicted RBP19.1■□□□□ 0.65
CEACAM1-212ENST00000488639 CARMIL2Q6F5E8 1435 aa19.09■□□□□ 0.65
CEACAM1-212ENST00000488639 UBTFP17480 764 aaKnown RBP19.09■□□□□ 0.65
CEACAM1-212ENST00000488639 TNIKQ9UKE5 1360 aa19.05■□□□□ 0.64
CEACAM1-212ENST00000488639 KIAA0556O60303 1618 aa19.04■□□□□ 0.64
CEACAM1-212ENST00000488639 EFCAB5A4FU69 1503 aa19.04■□□□□ 0.64
CEACAM1-212ENST00000488639 DISP1Q96F81 1524 aa19.04■□□□□ 0.64
CEACAM1-212ENST00000488639 SAMD9Q5K651 1589 aa19.03■□□□□ 0.64
CEACAM1-212ENST00000488639 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.64
CEACAM1-212ENST00000488639 ARAP1Q96P48 1450 aa19■□□□□ 0.63
CEACAM1-212ENST00000488639 EHMT2Q96KQ7 1210 aa18.95■□□□□ 0.62
CEACAM1-212ENST00000488639 PTPRGP23470 1445 aa18.92■□□□□ 0.62
CEACAM1-212ENST00000488639 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
CEACAM1-212ENST00000488639 ARHGAP35Q9NRY4 1499 aa18.89■□□□□ 0.61
CEACAM1-212ENST00000488639 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
CEACAM1-212ENST00000488639 CLIP1P30622 1438 aa18.87■□□□□ 0.61
CEACAM1-212ENST00000488639 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
CEACAM1-212ENST00000488639 UHRF1BP1LA0JNW5 1464 aa18.85■□□□□ 0.61
CEACAM1-212ENST00000488639 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
CEACAM1-212ENST00000488639 FHOD3Q2V2M9 1422 aa18.83■□□□□ 0.61
CEACAM1-212ENST00000488639 FMN1Q68DA7 1419 aa18.83■□□□□ 0.61
CEACAM1-212ENST00000488639 UACAQ9BZF9 1416 aa18.83■□□□□ 0.61
CEACAM1-212ENST00000488639 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
CEACAM1-212ENST00000488639 ABCC2Q92887 1545 aa18.82■□□□□ 0.6
CEACAM1-212ENST00000488639 ABCA8O94911 1581 aa18.81■□□□□ 0.6
CEACAM1-212ENST00000488639 ADCY10Q96PN6 1610 aa18.81■□□□□ 0.6
CEACAM1-212ENST00000488639 P3H3Q8IVL6 736 aa18.8■□□□□ 0.6
CEACAM1-212ENST00000488639 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
CEACAM1-212ENST00000488639 PLB1Q6P1J6 1458 aa18.76■□□□□ 0.59
CEACAM1-212ENST00000488639 KDM5BQ9UGL1 1544 aa18.74■□□□□ 0.59
CEACAM1-212ENST00000488639 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
CEACAM1-212ENST00000488639 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
CEACAM1-212ENST00000488639 HECW1Q76N89 1606 aa18.71■□□□□ 0.59
CEACAM1-212ENST00000488639 NPM1P06748 294 aaKnown RBP eCLIP18.71■□□□□ 0.59
CEACAM1-212ENST00000488639 MAPKBP1O60336 1514 aa18.69■□□□□ 0.58
CEACAM1-212ENST00000488639 CASKIN1Q8WXD9 1431 aa18.69■□□□□ 0.58
CEACAM1-212ENST00000488639 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
CEACAM1-212ENST00000488639 ZCCHC11Q5TAX3 1644 aaKnown RBP18.69■□□□□ 0.58
CEACAM1-212ENST00000488639 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
CEACAM1-212ENST00000488639 NUP153P49790 1475 aaKnown RBP18.67■□□□□ 0.58
CEACAM1-212ENST00000488639 PCF11O94913 1555 aaKnown RBP18.65■□□□□ 0.58
CEACAM1-212ENST00000488639 VPS8Q8N3P4 1428 aa18.64■□□□□ 0.57
CEACAM1-212ENST00000488639 CCDC18Q5T9S5 1454 aa18.63■□□□□ 0.57
CEACAM1-212ENST00000488639 ATP10BO94823 1461 aa18.62■□□□□ 0.57
CEACAM1-212ENST00000488639 EPRSP07814 1512 aaKnown RBP18.6■□□□□ 0.57
CEACAM1-212ENST00000488639 ASXL2Q76L83 1435 aa18.57■□□□□ 0.56
CEACAM1-212ENST00000488639 LRRIQ1Q96JM4 1722 aa18.57■□□□□ 0.56
CEACAM1-212ENST00000488639 WDR7Q9Y4E6 1490 aa18.56■□□□□ 0.56
CEACAM1-212ENST00000488639 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
CEACAM1-212ENST00000488639 CDK11AQ9UQ88 783 aaPredicted RBP18.54■□□□□ 0.56
CEACAM1-212ENST00000488639 CDK13Q14004 1512 aaKnown RBP18.54■□□□□ 0.56
CEACAM1-212ENST00000488639 ABCC10Q5T3U5 1492 aa18.52■□□□□ 0.56
CEACAM1-212ENST00000488639 ATP1B4Q9UN42 357 aaPredicted RBP18.52■□□□□ 0.56
CEACAM1-212ENST00000488639 MAP3K1Q13233 1512 aa18.52■□□□□ 0.56
CEACAM1-212ENST00000488639 GLI2P10070 1586 aa18.51■□□□□ 0.55
CEACAM1-212ENST00000488639 DIP2BQ9P265 1576 aa18.51■□□□□ 0.55
CEACAM1-212ENST00000488639 CFAP43Q8NDM7 1665 aa18.5■□□□□ 0.55
CEACAM1-212ENST00000488639 PLEKHD1A6NEE1 506 aa18.5■□□□□ 0.55
CEACAM1-212ENST00000488639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
CEACAM1-212ENST00000488639 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
CEACAM1-212ENST00000488639 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
CEACAM1-212ENST00000488639 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
CEACAM1-212ENST00000488639 ARID3CA6NKF2 412 aa18.46■□□□□ 0.55
CEACAM1-212ENST00000488639 TROQ12816 1431 aaPredicted RBP18.46■□□□□ 0.55
CEACAM1-212ENST00000488639 KIF14Q15058 1648 aa18.43■□□□□ 0.54
CEACAM1-212ENST00000488639 ABCA9Q8IUA7 1624 aa18.42■□□□□ 0.54
CEACAM1-212ENST00000488639 EHBP1L1Q8N3D4 1523 aa18.42■□□□□ 0.54
CEACAM1-212ENST00000488639 MAP3K4Q9Y6R4 1608 aa18.41■□□□□ 0.54
CEACAM1-212ENST00000488639 APLP2Q06481 763 aa18.41■□□□□ 0.54
CEACAM1-212ENST00000488639 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
CEACAM1-212ENST00000488639 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
CEACAM1-212ENST00000488639 MTUS2Q5JR59 1369 aa18.39■□□□□ 0.53
CEACAM1-212ENST00000488639 MAGI3Q5TCQ9 1506 aa18.39■□□□□ 0.53
CEACAM1-212ENST00000488639 KCNH8Q96L42 1107 aa18.37■□□□□ 0.53
CEACAM1-212ENST00000488639 LRRC9Q6ZRR7 1453 aa18.36■□□□□ 0.53
CEACAM1-212ENST00000488639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.36■□□□□ 0.53
CEACAM1-212ENST00000488639 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
CEACAM1-212ENST00000488639 ARAP3Q8WWN8 1544 aa18.33■□□□□ 0.53
CEACAM1-212ENST00000488639 TEX14Q8IWB6 1497 aa18.33■□□□□ 0.53
CEACAM1-212ENST00000488639 CD109Q6YHK3 1445 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms