RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 FAM9AQ8IZU1 332 aaPredicted RBP16.42■□□□□ 0.22
PDPN-206ENST00000488631 RIMBP3CA6NJZ7 1639 aa16.39■□□□□ 0.21
PDPN-206ENST00000488631 RIMBP3BA6NNM3 1639 aa16.39■□□□□ 0.21
PDPN-206ENST00000488631 RIMBP3Q9UFD9 1639 aa16.39■□□□□ 0.21
PDPN-206ENST00000488631 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
PDPN-206ENST00000488631 CLASP1Q7Z460 1538 aa16.36■□□□□ 0.21
PDPN-206ENST00000488631 NUP160Q12769 1436 aa16.36■□□□□ 0.21
PDPN-206ENST00000488631 JPH4Q96JJ6 628 aa16.35■□□□□ 0.21
PDPN-206ENST00000488631 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
PDPN-206ENST00000488631 CUL7Q14999 1698 aa16.34■□□□□ 0.21
PDPN-206ENST00000488631 TTBK1Q5TCY1 1321 aaPredicted RBP16.33■□□□□ 0.2
PDPN-206ENST00000488631 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
PDPN-206ENST00000488631 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
PDPN-206ENST00000488631 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
PDPN-206ENST00000488631 PRG4Q92954 1404 aaPredicted RBP16.28■□□□□ 0.2
PDPN-206ENST00000488631 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
PDPN-206ENST00000488631 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
PDPN-206ENST00000488631 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
PDPN-206ENST00000488631 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
PDPN-206ENST00000488631 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
PDPN-206ENST00000488631 EEA1Q15075 1411 aa16.22■□□□□ 0.19
PDPN-206ENST00000488631 RANGAP1P46060 587 aaPredicted RBP16.22■□□□□ 0.19
PDPN-206ENST00000488631 ERCC6L2Q5T890 1561 aa16.19■□□□□ 0.18
PDPN-206ENST00000488631 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
PDPN-206ENST00000488631 NPM1P06748 294 aaKnown RBP eCLIP16.18■□□□□ 0.18
PDPN-206ENST00000488631 UBTFP17480 764 aaKnown RBP16.16■□□□□ 0.18
PDPN-206ENST00000488631 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
PDPN-206ENST00000488631 SHROOM2Q13796 1616 aa16.15■□□□□ 0.18
PDPN-206ENST00000488631 IQGAP2Q13576 1575 aa16.14■□□□□ 0.17
PDPN-206ENST00000488631 PPP4R3CPQ6ZMV5 832 aa16.14■□□□□ 0.17
PDPN-206ENST00000488631 PTPRGP23470 1445 aa16.12■□□□□ 0.17
PDPN-206ENST00000488631 P3H3Q8IVL6 736 aa16.11■□□□□ 0.17
PDPN-206ENST00000488631 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
PDPN-206ENST00000488631 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
PDPN-206ENST00000488631 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
PDPN-206ENST00000488631 UGGT2Q9NYU1 1516 aa16.02■□□□□ 0.15
PDPN-206ENST00000488631 DISP1Q96F81 1524 aa16■□□□□ 0.15
PDPN-206ENST00000488631 CTTNBP2Q8WZ74 1663 aa16■□□□□ 0.15
PDPN-206ENST00000488631 ARID3CA6NKF2 412 aa15.97■□□□□ 0.15
PDPN-206ENST00000488631 KIF21BO75037 1637 aa15.97■□□□□ 0.15
PDPN-206ENST00000488631 UACAQ9BZF9 1416 aa15.96■□□□□ 0.15
PDPN-206ENST00000488631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
PDPN-206ENST00000488631 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
PDPN-206ENST00000488631 KIAA0556O60303 1618 aa15.96■□□□□ 0.15
PDPN-206ENST00000488631 FAM69CQ0P6D2 419 aa15.94■□□□□ 0.14
PDPN-206ENST00000488631 ATP1B4Q9UN42 357 aaPredicted RBP15.94■□□□□ 0.14
PDPN-206ENST00000488631 ADCY10Q96PN6 1610 aa15.9■□□□□ 0.14
PDPN-206ENST00000488631 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
PDPN-206ENST00000488631 PLB1Q6P1J6 1458 aa15.88■□□□□ 0.13
PDPN-206ENST00000488631 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
PDPN-206ENST00000488631 KCNH8Q96L42 1107 aa15.86■□□□□ 0.13
PDPN-206ENST00000488631 UHRF1BP1LA0JNW5 1464 aa15.85■□□□□ 0.13
PDPN-206ENST00000488631 ASXL2Q76L83 1435 aa15.83■□□□□ 0.12
PDPN-206ENST00000488631 EFCAB5A4FU69 1503 aa15.81■□□□□ 0.12
PDPN-206ENST00000488631 SAMD9Q5K651 1589 aa15.8■□□□□ 0.12
PDPN-206ENST00000488631 MAPKBP1O60336 1514 aa15.8■□□□□ 0.12
PDPN-206ENST00000488631 ABCC10Q5T3U5 1492 aa15.79■□□□□ 0.12
PDPN-206ENST00000488631 LOC105371045A0A1W2PR82 267 aa15.79■□□□□ 0.12
PDPN-206ENST00000488631 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
PDPN-206ENST00000488631 ABCA8O94911 1581 aa15.77■□□□□ 0.11
PDPN-206ENST00000488631 KDM5BQ9UGL1 1544 aa15.77■□□□□ 0.11
PDPN-206ENST00000488631 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
PDPN-206ENST00000488631 CLIP1P30622 1438 aa15.75■□□□□ 0.11
PDPN-206ENST00000488631 ARHGAP35Q9NRY4 1499 aa15.74■□□□□ 0.11
PDPN-206ENST00000488631 ZCCHC11Q5TAX3 1644 aaKnown RBP15.74■□□□□ 0.11
PDPN-206ENST00000488631 FMN1Q68DA7 1419 aa15.74■□□□□ 0.11
PDPN-206ENST00000488631 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
PDPN-206ENST00000488631 WDR7Q9Y4E6 1490 aa15.72■□□□□ 0.11
PDPN-206ENST00000488631 ATP10BO94823 1461 aa15.71■□□□□ 0.11
PDPN-206ENST00000488631 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
PDPN-206ENST00000488631 CDK11AQ9UQ88 783 aaPredicted RBP15.7■□□□□ 0.1
PDPN-206ENST00000488631 EPRSP07814 1512 aaKnown RBP15.68■□□□□ 0.1
PDPN-206ENST00000488631 NUP153P49790 1475 aaKnown RBP15.67■□□□□ 0.1
PDPN-206ENST00000488631 KIF13AQ9H1H9 1805 aa15.65■□□□□ 0.1
PDPN-206ENST00000488631 TSPOAP1O95153 1857 aa15.64■□□□□ 0.09
PDPN-206ENST00000488631 CEP162Q5TB80 1403 aa15.64■□□□□ 0.09
PDPN-206ENST00000488631 CD109Q6YHK3 1445 aa15.64■□□□□ 0.09
PDPN-206ENST00000488631 HECW1Q76N89 1606 aa15.61■□□□□ 0.09
PDPN-206ENST00000488631 NCBP3Q53F19 620 aaKnown RBP15.61■□□□□ 0.09
PDPN-206ENST00000488631 GLI2P10070 1586 aa15.61■□□□□ 0.09
PDPN-206ENST00000488631 TEX14Q8IWB6 1497 aa15.6■□□□□ 0.09
PDPN-206ENST00000488631 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
PDPN-206ENST00000488631 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
PDPN-206ENST00000488631 CASKIN1Q8WXD9 1431 aa15.58■□□□□ 0.08
PDPN-206ENST00000488631 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
PDPN-206ENST00000488631 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
PDPN-206ENST00000488631 KDM6BO15054 1643 aa15.54■□□□□ 0.08
PDPN-206ENST00000488631 APLP2Q06481 763 aa15.53■□□□□ 0.08
PDPN-206ENST00000488631 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
PDPN-206ENST00000488631 CCDC18Q5T9S5 1454 aa15.52■□□□□ 0.08
PDPN-206ENST00000488631 MAP3K4Q9Y6R4 1608 aa15.52■□□□□ 0.08
PDPN-206ENST00000488631 FYCO1Q9BQS8 1478 aa15.52■□□□□ 0.07
PDPN-206ENST00000488631 MAGI3Q5TCQ9 1506 aa15.5■□□□□ 0.07
PDPN-206ENST00000488631 CFAP43Q8NDM7 1665 aa15.5■□□□□ 0.07
PDPN-206ENST00000488631 TROQ12816 1431 aaPredicted RBP15.49■□□□□ 0.07
PDPN-206ENST00000488631 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
PDPN-206ENST00000488631 MYT1LQ9UL68 1186 aa15.48■□□□□ 0.07
PDPN-206ENST00000488631 EFCAB2Q5VUJ9 269 aa15.47■□□□□ 0.07
PDPN-206ENST00000488631 ZNF777Q9ULD5 760 aaPredicted RBP15.46■□□□□ 0.07
PDPN-206ENST00000488631 ABCA9Q8IUA7 1624 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms