RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	CUL7	Q14999	1698 aa		29.57	■■■□□ 2.32
SUN1-233	ENST00000488628	PRG4	Q92954	1404 aa	Predicted RBP	29.56	■■■□□ 2.32
SUN1-233	ENST00000488628	CARMIL1	Q5VZK9	1371 aa		29.48	■■■□□ 2.31
SUN1-233	ENST00000488628	KIAA0586	Q9BVV6	1533 aa		29.44	■■■□□ 2.3
SUN1-233	ENST00000488628	RAPGEF2	Q9Y4G8	1499 aa		29.23	■■■□□ 2.27
SUN1-233	ENST00000488628	IQGAP2	Q13576	1575 aa		29.22	■■■□□ 2.27
SUN1-233	ENST00000488628	ADCY10	Q96PN6	1610 aa		29.21	■■■□□ 2.27
SUN1-233	ENST00000488628	KIF13A	Q9H1H9	1805 aa		29.17	■■■□□ 2.26
SUN1-233	ENST00000488628	TTBK1	Q5TCY1	1321 aa	Predicted RBP	29.14	■■■□□ 2.25
SUN1-233	ENST00000488628	PTPRG	P23470	1445 aa		29.12	■■■□□ 2.25
SUN1-233	ENST00000488628	CARMIL2	Q6F5E8	1435 aa		29.11	■■■□□ 2.25
SUN1-233	ENST00000488628	NPM1	P06748	294 aa	Known RBP eCLIP	29.09	■■■□□ 2.25
SUN1-233	ENST00000488628	DISP1	Q96F81	1524 aa		29.09	■■■□□ 2.25
SUN1-233	ENST00000488628	TNIK	Q9UKE5	1360 aa		29.08	■■■□□ 2.25
SUN1-233	ENST00000488628	MAPKBP1	O60336	1514 aa		29.05	■■■□□ 2.24
SUN1-233	ENST00000488628	UGGT2	Q9NYU1	1516 aa		29.04	■■■□□ 2.24
SUN1-233	ENST00000488628	PRX	Q9BXM0	1461 aa		29.02	■■■□□ 2.24
SUN1-233	ENST00000488628	CTTNBP2	Q8WZ74	1663 aa		29.02	■■■□□ 2.24
SUN1-233	ENST00000488628	ABCC10	Q5T3U5	1492 aa		29.01	■■■□□ 2.23
SUN1-233	ENST00000488628	FAM69C	Q0P6D2	419 aa		28.99	■■■□□ 2.23
SUN1-233	ENST00000488628	DIP2B	Q9P265	1576 aa		28.97	■■■□□ 2.23
SUN1-233	ENST00000488628	KIAA0556	O60303	1618 aa		28.96	■■■□□ 2.23
SUN1-233	ENST00000488628	ABCC2	Q92887	1545 aa		28.92	■■■□□ 2.22
SUN1-233	ENST00000488628	UACA	Q9BZF9	1416 aa		28.91	■■■□□ 2.22
SUN1-233	ENST00000488628	UHRF1BP1L	A0JNW5	1464 aa		28.9	■■■□□ 2.22
SUN1-233	ENST00000488628	CSRNP3	Q8WYN3	585 aa		28.87	■■■□□ 2.21
SUN1-233	ENST00000488628	TSPOAP1	O95153	1857 aa		28.85	■■■□□ 2.21
SUN1-233	ENST00000488628	ASXL2	Q76L83	1435 aa		28.81	■■■□□ 2.2
SUN1-233	ENST00000488628	KDM5B	Q9UGL1	1544 aa		28.78	■■■□□ 2.2
SUN1-233	ENST00000488628	GOLGA3	Q08378	1498 aa		28.78	■■■□□ 2.2
SUN1-233	ENST00000488628	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.76	■■■□□ 2.2
SUN1-233	ENST00000488628	PLB1	Q6P1J6	1458 aa		28.75	■■■□□ 2.19
SUN1-233	ENST00000488628	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.74	■■■□□ 2.19
SUN1-233	ENST00000488628	EEA1	Q15075	1411 aa		28.72	■■■□□ 2.19
SUN1-233	ENST00000488628	ABCA8	O94911	1581 aa		28.69	■■■□□ 2.18
SUN1-233	ENST00000488628	GLI2	P10070	1586 aa		28.68	■■■□□ 2.18
SUN1-233	ENST00000488628	P3H3	Q8IVL6	736 aa		28.68	■■■□□ 2.18
SUN1-233	ENST00000488628	PPRC1	Q5VV67	1664 aa	Known RBP	28.66	■■■□□ 2.18
SUN1-233	ENST00000488628	CHIC1	Q5VXU3	224 aa		28.65	■■■□□ 2.18
SUN1-233	ENST00000488628	EPRS	P07814	1512 aa	Known RBP	28.64	■■■□□ 2.18
SUN1-233	ENST00000488628	KDM6B	O15054	1643 aa		28.62	■■■□□ 2.17
SUN1-233	ENST00000488628	SAMD9	Q5K651	1589 aa		28.61	■■■□□ 2.17
SUN1-233	ENST00000488628	MAP3K4	Q9Y6R4	1608 aa		28.57	■■■□□ 2.16
SUN1-233	ENST00000488628	WDR7	Q9Y4E6	1490 aa		28.56	■■■□□ 2.16
SUN1-233	ENST00000488628	RANGAP1	P46060	587 aa	Predicted RBP	28.55	■■■□□ 2.16
SUN1-233	ENST00000488628	KIF21B	O75037	1637 aa		28.54	■■■□□ 2.16
SUN1-233	ENST00000488628	ARID3C	A6NKF2	412 aa		28.51	■■■□□ 2.15
SUN1-233	ENST00000488628	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.51	■■■□□ 2.15
SUN1-233	ENST00000488628	KCNH8	Q96L42	1107 aa		28.47	■■■□□ 2.15
SUN1-233	ENST00000488628	EHMT2	Q96KQ7	1210 aa		28.46	■■■□□ 2.15
SUN1-233	ENST00000488628	ATP10B	O94823	1461 aa		28.46	■■■□□ 2.15
SUN1-233	ENST00000488628	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.44	■■■□□ 2.14
SUN1-233	ENST00000488628	FHOD3	Q2V2M9	1422 aa		28.43	■■■□□ 2.14
SUN1-233	ENST00000488628	RAPGEF6	Q8TEU7	1601 aa		28.43	■■■□□ 2.14
SUN1-233	ENST00000488628	TEX14	Q8IWB6	1497 aa		28.39	■■■□□ 2.13
SUN1-233	ENST00000488628	CFAP43	Q8NDM7	1665 aa		28.38	■■■□□ 2.13
SUN1-233	ENST00000488628	CD109	Q6YHK3	1445 aa		28.36	■■■□□ 2.13
SUN1-233	ENST00000488628	NUP153	P49790	1475 aa	Known RBP	28.34	■■■□□ 2.13
SUN1-233	ENST00000488628	UBTF	P17480	764 aa	Known RBP	28.32	■■■□□ 2.12
SUN1-233	ENST00000488628	EFCAB5	A4FU69	1503 aa		28.32	■■■□□ 2.12
SUN1-233	ENST00000488628	MAGI3	Q5TCQ9	1506 aa		28.31	■■■□□ 2.12
SUN1-233	ENST00000488628	KDM4F	A0A1W2PPD8	638 aa		28.27	■■■□□ 2.12
SUN1-233	ENST00000488628	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.27	■■■□□ 2.12
SUN1-233	ENST00000488628	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.27	■■■□□ 2.12
SUN1-233	ENST00000488628	ABCA9	Q8IUA7	1624 aa		28.23	■■■□□ 2.11
SUN1-233	ENST00000488628	ARHGAP35	Q9NRY4	1499 aa		28.19	■■■□□ 2.1
SUN1-233	ENST00000488628	PLEKHD1	A6NEE1	506 aa		28.11	■■■□□ 2.09
SUN1-233	ENST00000488628	CDK13	Q14004	1512 aa	Known RBP	28.11	■■■□□ 2.09
SUN1-233	ENST00000488628	ARAP3	Q8WWN8	1544 aa		28.09	■■■□□ 2.09
SUN1-233	ENST00000488628	ADGRL1	O94910	1474 aa		28.07	■■■□□ 2.08
SUN1-233	ENST00000488628	FMN1	Q68DA7	1419 aa		28.05	■■■□□ 2.08
SUN1-233	ENST00000488628	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.04	■■■□□ 2.08
SUN1-233	ENST00000488628	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.02	■■■□□ 2.08
SUN1-233	ENST00000488628	NEO1	Q92859	1461 aa		28.01	■■■□□ 2.07
SUN1-233	ENST00000488628	PHLDB1	Q86UU1	1377 aa		28	■■■□□ 2.07
SUN1-233	ENST00000488628	HECW1	Q76N89	1606 aa		28	■■■□□ 2.07
SUN1-233	ENST00000488628	TTC37	Q6PGP7	1564 aa		28	■■■□□ 2.07
SUN1-233	ENST00000488628	LRRIQ1	Q96JM4	1722 aa		27.99	■■■□□ 2.07
SUN1-233	ENST00000488628	RAPGEF3	O95398	923 aa		27.99	■■■□□ 2.07
SUN1-233	ENST00000488628	FRMPD1	Q5SYB0	1578 aa		27.94	■■■□□ 2.06
SUN1-233	ENST00000488628	AKNA	Q7Z591	1439 aa		27.9	■■■□□ 2.06
SUN1-233	ENST00000488628	FANCA	O15360	1455 aa		27.89	■■■□□ 2.06
SUN1-233	ENST00000488628	KIF14	Q15058	1648 aa		27.87	■■■□□ 2.05
SUN1-233	ENST00000488628	PCF11	O94913	1555 aa	Known RBP	27.86	■■■□□ 2.05
SUN1-233	ENST00000488628	RICTOR	Q6R327	1708 aa		27.86	■■■□□ 2.05
SUN1-233	ENST00000488628	CFAP74	Q9C0B2	1584 aa		27.85	■■■□□ 2.05
SUN1-233	ENST00000488628	CDK11A	Q9UQ88	783 aa	Predicted RBP	27.83	■■■□□ 2.05
SUN1-233	ENST00000488628	PLCH2	O75038	1416 aa		27.83	■■■□□ 2.05
SUN1-233	ENST00000488628	CASKIN1	Q8WXD9	1431 aa		27.83	■■■□□ 2.05
SUN1-233	ENST00000488628	DENND4B	O75064	1496 aa	Predicted RBP	27.83	■■■□□ 2.04
SUN1-233	ENST00000488628	CLIP1	P30622	1438 aa		27.82	■■■□□ 2.04
SUN1-233	ENST00000488628	TRO	Q12816	1431 aa	Predicted RBP	27.82	■■■□□ 2.04
SUN1-233	ENST00000488628	MYO5C	Q9NQX4	1742 aa		27.8	■■■□□ 2.04
SUN1-233	ENST00000488628	CCDC18	Q5T9S5	1454 aa		27.72	■■■□□ 2.03
SUN1-233	ENST00000488628	SCAPER	Q9BY12	1400 aa		27.72	■■■□□ 2.03
SUN1-233	ENST00000488628	ARHGEF40	Q8TER5	1519 aa		27.72	■■■□□ 2.03
SUN1-233	ENST00000488628	FYCO1	Q9BQS8	1478 aa		27.71	■■■□□ 2.03
SUN1-233	ENST00000488628	ADAMTSL3	P82987	1691 aa		27.71	■■■□□ 2.03
SUN1-233	ENST00000488628	EFCAB2	Q5VUJ9	269 aa		27.7	■■■□□ 2.02
SUN1-233	ENST00000488628	ZMYM4	Q5VZL5	1548 aa		27.7	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms