RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 FBLN2P98095 1184 aa24.51■■□□□ 1.51
CTNS-206ENST00000488623 TNIKQ9UKE5 1360 aa24.48■■□□□ 1.51
CTNS-206ENST00000488623 ARHGEF11O15085 1522 aa24.47■■□□□ 1.51
CTNS-206ENST00000488623 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
CTNS-206ENST00000488623 CHMP7Q8WUX9 453 aaPredicted RBP24.43■■□□□ 1.5
CTNS-206ENST00000488623 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
CTNS-206ENST00000488623 CLASP1Q7Z460 1538 aa24.32■■□□□ 1.48
CTNS-206ENST00000488623 CTTNBP2Q8WZ74 1663 aa24.27■■□□□ 1.48
CTNS-206ENST00000488623 CEP162Q5TB80 1403 aa24.27■■□□□ 1.48
CTNS-206ENST00000488623 RANGAP1P46060 587 aaPredicted RBP24.26■■□□□ 1.47
CTNS-206ENST00000488623 NUP160Q12769 1436 aa24.25■■□□□ 1.47
CTNS-206ENST00000488623 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
CTNS-206ENST00000488623 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
CTNS-206ENST00000488623 CYB5RLQ6IPT4 315 aa24.24■■□□□ 1.47
CTNS-206ENST00000488623 KIAA0586Q9BVV6 1533 aa24.21■■□□□ 1.47
CTNS-206ENST00000488623 CLIP1P30622 1438 aa24.2■■□□□ 1.46
CTNS-206ENST00000488623 IQGAP2Q13576 1575 aa24.16■■□□□ 1.46
CTNS-206ENST00000488623 ARHGAP35Q9NRY4 1499 aa24.1■■□□□ 1.45
CTNS-206ENST00000488623 JPH4Q96JJ6 628 aa24.09■■□□□ 1.45
CTNS-206ENST00000488623 UGGT2Q9NYU1 1516 aa24.07■■□□□ 1.44
CTNS-206ENST00000488623 P3H3Q8IVL6 736 aa24.06■■□□□ 1.44
CTNS-206ENST00000488623 SAMD9Q5K651 1589 aa24.03■■□□□ 1.44
CTNS-206ENST00000488623 EFCAB5A4FU69 1503 aa24.02■■□□□ 1.44
CTNS-206ENST00000488623 DISP1Q96F81 1524 aa23.99■■□□□ 1.43
CTNS-206ENST00000488623 SHROOM2Q13796 1616 aa23.97■■□□□ 1.43
CTNS-206ENST00000488623 FHOD3Q2V2M9 1422 aa23.97■■□□□ 1.43
CTNS-206ENST00000488623 ERCC6L2Q5T890 1561 aa23.97■■□□□ 1.43
CTNS-206ENST00000488623 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
CTNS-206ENST00000488623 KIAA0556O60303 1618 aa23.93■■□□□ 1.42
CTNS-206ENST00000488623 VPS8Q8N3P4 1428 aa23.92■■□□□ 1.42
CTNS-206ENST00000488623 CARMIL2Q6F5E8 1435 aa23.91■■□□□ 1.42
CTNS-206ENST00000488623 TRHP20396 242 aaPredicted RBP23.9■■□□□ 1.42
CTNS-206ENST00000488623 FMN1Q68DA7 1419 aa23.82■■□□□ 1.4
CTNS-206ENST00000488623 TTBK1Q5TCY1 1321 aaPredicted RBP23.81■■□□□ 1.4
CTNS-206ENST00000488623 PTPRGP23470 1445 aa23.75■■□□□ 1.39
CTNS-206ENST00000488623 CASKIN1Q8WXD9 1431 aa23.75■■□□□ 1.39
CTNS-206ENST00000488623 PCF11O94913 1555 aaKnown RBP23.73■■□□□ 1.39
CTNS-206ENST00000488623 ATP1B4Q9UN42 357 aaPredicted RBP23.72■■□□□ 1.39
CTNS-206ENST00000488623 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
CTNS-206ENST00000488623 PLB1Q6P1J6 1458 aa23.67■■□□□ 1.38
CTNS-206ENST00000488623 APLP2Q06481 763 aa23.66■■□□□ 1.38
CTNS-206ENST00000488623 PPARGC1BQ86YN6 1023 aaKnown RBP23.65■■□□□ 1.38
CTNS-206ENST00000488623 RAPGEF6Q8TEU7 1601 aa23.65■■□□□ 1.38
CTNS-206ENST00000488623 ABCA8O94911 1581 aa23.64■■□□□ 1.37
CTNS-206ENST00000488623 LRRIQ1Q96JM4 1722 aa23.61■■□□□ 1.37
CTNS-206ENST00000488623 HECW1Q76N89 1606 aa23.6■■□□□ 1.37
CTNS-206ENST00000488623 UACAQ9BZF9 1416 aa23.59■■□□□ 1.37
CTNS-206ENST00000488623 MAP3K1Q13233 1512 aa23.59■■□□□ 1.37
CTNS-206ENST00000488623 NUP153P49790 1475 aaKnown RBP23.59■■□□□ 1.37
CTNS-206ENST00000488623 KANK4Q5T7N3 995 aaPredicted RBP23.58■■□□□ 1.37
CTNS-206ENST00000488623 TIAM1Q13009 1591 aa23.57■■□□□ 1.36
CTNS-206ENST00000488623 KIF13AQ9H1H9 1805 aa23.56■■□□□ 1.36
CTNS-206ENST00000488623 EPRSP07814 1512 aaKnown RBP23.56■■□□□ 1.36
CTNS-206ENST00000488623 ARID3CA6NKF2 412 aa23.56■■□□□ 1.36
CTNS-206ENST00000488623 ADCY10Q96PN6 1610 aa23.55■■□□□ 1.36
CTNS-206ENST00000488623 CFAP43Q8NDM7 1665 aa23.52■■□□□ 1.36
CTNS-206ENST00000488623 CCDC18Q5T9S5 1454 aa23.52■■□□□ 1.36
CTNS-206ENST00000488623 UHRF1BP1LA0JNW5 1464 aa23.51■■□□□ 1.35
CTNS-206ENST00000488623 CDK13Q14004 1512 aaKnown RBP23.51■■□□□ 1.35
CTNS-206ENST00000488623 ABCC2Q92887 1545 aa23.5■■□□□ 1.35
CTNS-206ENST00000488623 ATP10BO94823 1461 aa23.49■■□□□ 1.35
CTNS-206ENST00000488623 LRRC9Q6ZRR7 1453 aa23.48■■□□□ 1.35
CTNS-206ENST00000488623 NPM1P06748 294 aaKnown RBP eCLIP23.47■■□□□ 1.35
CTNS-206ENST00000488623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
CTNS-206ENST00000488623 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
CTNS-206ENST00000488623 MAPKBP1O60336 1514 aa23.44■■□□□ 1.34
CTNS-206ENST00000488623 MAGI3Q5TCQ9 1506 aa23.43■■□□□ 1.34
CTNS-206ENST00000488623 MTUS2Q5JR59 1369 aa23.4■■□□□ 1.34
CTNS-206ENST00000488623 CDK11AQ9UQ88 783 aaPredicted RBP23.4■■□□□ 1.34
CTNS-206ENST00000488623 KDM5BQ9UGL1 1544 aa23.39■■□□□ 1.34
CTNS-206ENST00000488623 ABCC10Q5T3U5 1492 aa23.37■■□□□ 1.33
CTNS-206ENST00000488623 DIP2BQ9P265 1576 aa23.37■■□□□ 1.33
CTNS-206ENST00000488623 PLEKHD1A6NEE1 506 aa23.36■■□□□ 1.33
CTNS-206ENST00000488623 ZCCHC11Q5TAX3 1644 aaKnown RBP23.36■■□□□ 1.33
CTNS-206ENST00000488623 EHBP1L1Q8N3D4 1523 aa23.34■■□□□ 1.33
CTNS-206ENST00000488623 FAM69CQ0P6D2 419 aa23.33■■□□□ 1.33
CTNS-206ENST00000488623 TROQ12816 1431 aaPredicted RBP23.32■■□□□ 1.32
CTNS-206ENST00000488623 TSPOAP1O95153 1857 aa23.31■■□□□ 1.32
CTNS-206ENST00000488623 TRIM26Q12899 539 aaPredicted RBP23.27■■□□□ 1.32
CTNS-206ENST00000488623 SUPT6HQ7KZ85 1726 aaKnown RBP23.27■■□□□ 1.32
CTNS-206ENST00000488623 NCOA2Q15596 1464 aa23.26■■□□□ 1.31
CTNS-206ENST00000488623 PHLDB1Q86UU1 1377 aa23.26■■□□□ 1.31
CTNS-206ENST00000488623 KCNH8Q96L42 1107 aa23.21■■□□□ 1.31
CTNS-206ENST00000488623 ASXL2Q76L83 1435 aa23.21■■□□□ 1.31
CTNS-206ENST00000488623 KIF14Q15058 1648 aa23.21■■□□□ 1.31
CTNS-206ENST00000488623 WDR7Q9Y4E6 1490 aa23.17■■□□□ 1.3
CTNS-206ENST00000488623 MYOM3Q5VTT5 1437 aa23.15■■□□□ 1.3
CTNS-206ENST00000488623 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.3
CTNS-206ENST00000488623 GLI2P10070 1586 aa23.14■■□□□ 1.3
CTNS-206ENST00000488623 RRBP1Q9P2E9 1410 aaKnown RBP23.14■■□□□ 1.29
CTNS-206ENST00000488623 PCGF6Q9BYE7 350 aa23.13■■□□□ 1.29
CTNS-206ENST00000488623 KDM6BO15054 1643 aa23.12■■□□□ 1.29
CTNS-206ENST00000488623 PPRC1Q5VV67 1664 aaKnown RBP23.11■■□□□ 1.29
CTNS-206ENST00000488623 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.11■■□□□ 1.29
CTNS-206ENST00000488623 GPATCH8Q9UKJ3 1502 aaKnown RBP23.1■■□□□ 1.29
CTNS-206ENST00000488623 FGD6Q6ZV73 1430 aa23.09■■□□□ 1.29
CTNS-206ENST00000488623 MAP3K4Q9Y6R4 1608 aa23.07■■□□□ 1.28
CTNS-206ENST00000488623 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
CTNS-206ENST00000488623 MIA2Q96PC5 1412 aa23.06■■□□□ 1.28
CTNS-206ENST00000488623 CDC42BPAQ5VT25 1732 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms