RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 TRHP20396 242 aaPredicted RBP39.88■■■■□ 3.97
CUL4A-209ENST00000488558 JPH4Q96JJ6 628 aa39.87■■■■□ 3.97
CUL4A-209ENST00000488558 KIAA0586Q9BVV6 1533 aa39.86■■■■□ 3.97
CUL4A-209ENST00000488558 CARMIL1Q5VZK9 1371 aa39.8■■■■□ 3.96
CUL4A-209ENST00000488558 IQGAP2Q13576 1575 aa39.56■■■■□ 3.92
CUL4A-209ENST00000488558 RAPGEF2Q9Y4G8 1499 aa39.55■■■■□ 3.92
CUL4A-209ENST00000488558 ADCY10Q96PN6 1610 aa39.46■■■■□ 3.91
CUL4A-209ENST00000488558 CARMIL2Q6F5E8 1435 aa39.42■■■■□ 3.9
CUL4A-209ENST00000488558 MAPKBP1O60336 1514 aa39.38■■■■□ 3.89
CUL4A-209ENST00000488558 KIF13AQ9H1H9 1805 aa39.36■■■■□ 3.89
CUL4A-209ENST00000488558 UGGT2Q9NYU1 1516 aa39.34■■■■□ 3.89
CUL4A-209ENST00000488558 TNIKQ9UKE5 1360 aa39.33■■■■□ 3.89
CUL4A-209ENST00000488558 PTPRGP23470 1445 aa39.32■■■■□ 3.89
CUL4A-209ENST00000488558 CTTNBP2Q8WZ74 1663 aa39.3■■■■□ 3.88
CUL4A-209ENST00000488558 NPM1P06748 294 aaKnown RBP eCLIP39.3■■■■□ 3.88
CUL4A-209ENST00000488558 DISP1Q96F81 1524 aa39.3■■■■□ 3.88
CUL4A-209ENST00000488558 PRXQ9BXM0 1461 aa39.27■■■■□ 3.88
CUL4A-209ENST00000488558 ABCC10Q5T3U5 1492 aa39.23■■■■□ 3.87
CUL4A-209ENST00000488558 KIAA0556O60303 1618 aa39.2■■■■□ 3.87
CUL4A-209ENST00000488558 DIP2BQ9P265 1576 aa39.18■■■■□ 3.86
CUL4A-209ENST00000488558 UHRF1BP1LA0JNW5 1464 aa39.16■■■■□ 3.86
CUL4A-209ENST00000488558 ABCC2Q92887 1545 aa39.14■■■■□ 3.86
CUL4A-209ENST00000488558 UACAQ9BZF9 1416 aa39.08■■■■□ 3.85
CUL4A-209ENST00000488558 TTBK1Q5TCY1 1321 aaPredicted RBP39.05■■■■□ 3.84
CUL4A-209ENST00000488558 GOLGA3Q08378 1498 aa39.05■■■■□ 3.84
CUL4A-209ENST00000488558 FAM69CQ0P6D2 419 aa39.04■■■■□ 3.84
CUL4A-209ENST00000488558 EEA1Q15075 1411 aa39.03■■■■□ 3.84
CUL4A-209ENST00000488558 CSRNP3Q8WYN3 585 aa38.96■■■■□ 3.83
CUL4A-209ENST00000488558 KDM5BQ9UGL1 1544 aa38.95■■■■□ 3.83
CUL4A-209ENST00000488558 PLB1Q6P1J6 1458 aa38.93■■■■□ 3.82
CUL4A-209ENST00000488558 ASXL2Q76L83 1435 aa38.91■■■■□ 3.82
CUL4A-209ENST00000488558 ZCCHC11Q5TAX3 1644 aaKnown RBP38.87■■■■□ 3.81
CUL4A-209ENST00000488558 GLI2P10070 1586 aa38.86■■■■□ 3.81
CUL4A-209ENST00000488558 ABCA8O94911 1581 aa38.81■■■■□ 3.8
CUL4A-209ENST00000488558 TSPOAP1O95153 1857 aa38.79■■■■□ 3.8
CUL4A-209ENST00000488558 SAMD9Q5K651 1589 aa38.75■■■■□ 3.79
CUL4A-209ENST00000488558 KDM6BO15054 1643 aa38.71■■■■□ 3.79
CUL4A-209ENST00000488558 KIF21BO75037 1637 aa38.71■■■■□ 3.79
CUL4A-209ENST00000488558 EPRSP07814 1512 aaKnown RBP38.7■■■■□ 3.79
CUL4A-209ENST00000488558 PPRC1Q5VV67 1664 aaKnown RBP38.68■■■■□ 3.78
CUL4A-209ENST00000488558 MAP3K4Q9Y6R4 1608 aa38.66■■■■□ 3.78
CUL4A-209ENST00000488558 WDR7Q9Y4E6 1490 aa38.65■■■■□ 3.78
CUL4A-209ENST00000488558 CHIC1Q5VXU3 224 aa38.58■■■■□ 3.77
CUL4A-209ENST00000488558 FAM9AQ8IZU1 332 aaPredicted RBP38.57■■■■□ 3.76
CUL4A-209ENST00000488558 TEX14Q8IWB6 1497 aa38.49■■■■□ 3.75
CUL4A-209ENST00000488558 P3H3Q8IVL6 736 aa38.49■■■■□ 3.75
CUL4A-209ENST00000488558 RAPGEF6Q8TEU7 1601 aa38.48■■■■□ 3.75
CUL4A-209ENST00000488558 EFCAB5A4FU69 1503 aa38.46■■■■□ 3.75
CUL4A-209ENST00000488558 CFAP43Q8NDM7 1665 aa38.46■■■■□ 3.75
CUL4A-209ENST00000488558 ATP10BO94823 1461 aa38.41■■■■□ 3.74
CUL4A-209ENST00000488558 AEBP2Q6ZN18 517 aaPredicted RBP38.37■■■■□ 3.73
CUL4A-209ENST00000488558 FHOD3Q2V2M9 1422 aa38.36■■■■□ 3.73
CUL4A-209ENST00000488558 MAGI3Q5TCQ9 1506 aa38.35■■■■□ 3.73
CUL4A-209ENST00000488558 CD109Q6YHK3 1445 aa38.3■■■■□ 3.72
CUL4A-209ENST00000488558 NUP153P49790 1475 aaKnown RBP38.3■■■■□ 3.72
CUL4A-209ENST00000488558 COL17A1Q9UMD9 1497 aaPredicted RBP38.28■■■■□ 3.72
CUL4A-209ENST00000488558 KCNH8Q96L42 1107 aa38.27■■■■□ 3.72
CUL4A-209ENST00000488558 RANGAP1P46060 587 aaPredicted RBP38.26■■■■□ 3.72
CUL4A-209ENST00000488558 ARID3CA6NKF2 412 aa38.23■■■■□ 3.71
CUL4A-209ENST00000488558 ABCA9Q8IUA7 1624 aa38.23■■■■□ 3.71
CUL4A-209ENST00000488558 UBTFP17480 764 aaKnown RBP38.17■■■■□ 3.7
CUL4A-209ENST00000488558 ARHGAP35Q9NRY4 1499 aa38.08■■■■□ 3.69
CUL4A-209ENST00000488558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.07■■■■□ 3.68
CUL4A-209ENST00000488558 HNRNPUL2Q1KMD3 747 aaKnown RBP38.07■■■■□ 3.68
CUL4A-209ENST00000488558 FMN1Q68DA7 1419 aa38.04■■■■□ 3.68
CUL4A-209ENST00000488558 EHMT2Q96KQ7 1210 aa38.04■■■■□ 3.68
CUL4A-209ENST00000488558 ARAP3Q8WWN8 1544 aa38.03■■■■□ 3.68
CUL4A-209ENST00000488558 PHLDB1Q86UU1 1377 aa38.01■■■■□ 3.68
CUL4A-209ENST00000488558 HECW1Q76N89 1606 aa37.98■■■■□ 3.67
CUL4A-209ENST00000488558 KDM4FA0A1W2PPD8 638 aa37.98■■■■□ 3.67
CUL4A-209ENST00000488558 NEO1Q92859 1461 aa37.96■■■■□ 3.67
CUL4A-209ENST00000488558 PLEKHD1A6NEE1 506 aa37.96■■■■□ 3.67
CUL4A-209ENST00000488558 CDK13Q14004 1512 aaKnown RBP37.92■■■■□ 3.66
CUL4A-209ENST00000488558 ADGRL1O94910 1474 aa37.89■■■■□ 3.66
CUL4A-209ENST00000488558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.87■■■■□ 3.653e-8■■■□□ 17.7
CUL4A-209ENST00000488558 TTC37Q6PGP7 1564 aa37.84■■■■□ 3.65
CUL4A-209ENST00000488558 CFAP74Q9C0B2 1584 aa37.84■■■■□ 3.65
CUL4A-209ENST00000488558 FRMPD1Q5SYB0 1578 aa37.76■■■■□ 3.63
CUL4A-209ENST00000488558 LRRIQ1Q96JM4 1722 aa37.74■■■■□ 3.63
CUL4A-209ENST00000488558 FANCAO15360 1455 aa37.72■■■■□ 3.63
CUL4A-209ENST00000488558 CDK11AQ9UQ88 783 aaPredicted RBP37.7■■■■□ 3.63
CUL4A-209ENST00000488558 PCF11O94913 1555 aaKnown RBP37.69■■■■□ 3.62
CUL4A-209ENST00000488558 ATP1B4Q9UN42 357 aaPredicted RBP37.69■■■■□ 3.62
CUL4A-209ENST00000488558 AKNAQ7Z591 1439 aa37.68■■■■□ 3.62
CUL4A-209ENST00000488558 CASKIN1Q8WXD9 1431 aa37.68■■■■□ 3.62
CUL4A-209ENST00000488558 RICTORQ6R327 1708 aa37.67■■■■□ 3.62
CUL4A-209ENST00000488558 KIF14Q15058 1648 aa37.65■■■■□ 3.62
CUL4A-209ENST00000488558 RAPGEF3O95398 923 aa37.65■■■■□ 3.62
CUL4A-209ENST00000488558 TROQ12816 1431 aaPredicted RBP37.64■■■■□ 3.62
CUL4A-209ENST00000488558 MYO5CQ9NQX4 1742 aa37.64■■■■□ 3.62
CUL4A-209ENST00000488558 DENND4BO75064 1496 aaPredicted RBP37.64■■■■□ 3.62
CUL4A-209ENST00000488558 CCDC18Q5T9S5 1454 aa37.64■■■■□ 3.62
CUL4A-209ENST00000488558 PLCH2O75038 1416 aa37.62■■■■□ 3.61
CUL4A-209ENST00000488558 CLIP1P30622 1438 aa37.61■■■■□ 3.61
CUL4A-209ENST00000488558 FYCO1Q9BQS8 1478 aa37.58■■■■□ 3.61
CUL4A-209ENST00000488558 ARHGEF40Q8TER5 1519 aa37.56■■■■□ 3.6
CUL4A-209ENST00000488558 ZMYM4Q5VZL5 1548 aa37.56■■■■□ 3.6
CUL4A-209ENST00000488558 MAGI2Q86UL8 1455 aa37.45■■■■□ 3.59
CUL4A-209ENST00000488558 POGZQ7Z3K3 1410 aa37.44■■■■□ 3.58
CUL4A-209ENST00000488558 ADAMTSL3P82987 1691 aa37.44■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms