RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 KIAA0586Q9BVV6 1533 aa24.25■■□□□ 1.47
COL9A2-208ENST00000488463 JPH4Q96JJ6 628 aa24.22■■□□□ 1.47
COL9A2-208ENST00000488463 PRG4Q92954 1404 aaPredicted RBP24.2■■□□□ 1.46
COL9A2-208ENST00000488463 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
COL9A2-208ENST00000488463 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
COL9A2-208ENST00000488463 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
COL9A2-208ENST00000488463 IQGAP2Q13576 1575 aa24.08■■□□□ 1.44
COL9A2-208ENST00000488463 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
COL9A2-208ENST00000488463 UGGT2Q9NYU1 1516 aa23.98■■□□□ 1.43
COL9A2-208ENST00000488463 CTTNBP2Q8WZ74 1663 aa23.97■■□□□ 1.43
COL9A2-208ENST00000488463 DISP1Q96F81 1524 aa23.97■■□□□ 1.43
COL9A2-208ENST00000488463 EEA1Q15075 1411 aa23.96■■□□□ 1.43
COL9A2-208ENST00000488463 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
COL9A2-208ENST00000488463 CARMIL2Q6F5E8 1435 aa23.91■■□□□ 1.42
COL9A2-208ENST00000488463 ADCY10Q96PN6 1610 aa23.91■■□□□ 1.42
COL9A2-208ENST00000488463 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
COL9A2-208ENST00000488463 PTPRGP23470 1445 aa23.87■■□□□ 1.41
COL9A2-208ENST00000488463 KIAA0556O60303 1618 aa23.86■■□□□ 1.41
COL9A2-208ENST00000488463 FAM9AQ8IZU1 332 aaPredicted RBP23.8■■□□□ 1.4
COL9A2-208ENST00000488463 KIF21BO75037 1637 aa23.78■■□□□ 1.4
COL9A2-208ENST00000488463 MAPKBP1O60336 1514 aa23.77■■□□□ 1.4
COL9A2-208ENST00000488463 UHRF1BP1LA0JNW5 1464 aa23.75■■□□□ 1.39
COL9A2-208ENST00000488463 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
COL9A2-208ENST00000488463 KIF13AQ9H1H9 1805 aa23.74■■□□□ 1.39
COL9A2-208ENST00000488463 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
COL9A2-208ENST00000488463 UACAQ9BZF9 1416 aa23.73■■□□□ 1.39
COL9A2-208ENST00000488463 ABCC2Q92887 1545 aa23.72■■□□□ 1.39
COL9A2-208ENST00000488463 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
COL9A2-208ENST00000488463 NPM1P06748 294 aaKnown RBP eCLIP23.68■■□□□ 1.38
COL9A2-208ENST00000488463 ABCC10Q5T3U5 1492 aa23.67■■□□□ 1.38
COL9A2-208ENST00000488463 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
COL9A2-208ENST00000488463 ABCA8O94911 1581 aa23.65■■□□□ 1.38
COL9A2-208ENST00000488463 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
COL9A2-208ENST00000488463 PLB1Q6P1J6 1458 aa23.64■■□□□ 1.38
COL9A2-208ENST00000488463 ZCCHC11Q5TAX3 1644 aaKnown RBP23.59■■□□□ 1.37
COL9A2-208ENST00000488463 ASXL2Q76L83 1435 aa23.57■■□□□ 1.36
COL9A2-208ENST00000488463 P3H3Q8IVL6 736 aa23.56■■□□□ 1.36
COL9A2-208ENST00000488463 FAM69CQ0P6D2 419 aa23.55■■□□□ 1.36
COL9A2-208ENST00000488463 EFCAB5A4FU69 1503 aa23.5■■□□□ 1.35
COL9A2-208ENST00000488463 GLI2P10070 1586 aa23.49■■□□□ 1.35
COL9A2-208ENST00000488463 FHOD3Q2V2M9 1422 aa23.49■■□□□ 1.35
COL9A2-208ENST00000488463 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
COL9A2-208ENST00000488463 EPRSP07814 1512 aaKnown RBP23.45■■□□□ 1.34
COL9A2-208ENST00000488463 UBTFP17480 764 aaKnown RBP23.45■■□□□ 1.34
COL9A2-208ENST00000488463 RANGAP1P46060 587 aaPredicted RBP23.45■■□□□ 1.34
COL9A2-208ENST00000488463 RAPGEF6Q8TEU7 1601 aa23.44■■□□□ 1.34
COL9A2-208ENST00000488463 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
COL9A2-208ENST00000488463 ATP10BO94823 1461 aa23.43■■□□□ 1.34
COL9A2-208ENST00000488463 WDR7Q9Y4E6 1490 aa23.43■■□□□ 1.34
COL9A2-208ENST00000488463 PPRC1Q5VV67 1664 aaKnown RBP23.41■■□□□ 1.34
COL9A2-208ENST00000488463 TSPOAP1O95153 1857 aa23.41■■□□□ 1.34
COL9A2-208ENST00000488463 ARHGAP35Q9NRY4 1499 aa23.4■■□□□ 1.34
COL9A2-208ENST00000488463 NUP153P49790 1475 aaKnown RBP23.39■■□□□ 1.34
COL9A2-208ENST00000488463 MAP3K4Q9Y6R4 1608 aa23.38■■□□□ 1.33
COL9A2-208ENST00000488463 ARID3CA6NKF2 412 aa23.32■■□□□ 1.32
COL9A2-208ENST00000488463 CFAP43Q8NDM7 1665 aa23.27■■□□□ 1.32
COL9A2-208ENST00000488463 KDM6BO15054 1643 aa23.25■■□□□ 1.31
COL9A2-208ENST00000488463 FMN1Q68DA7 1419 aa23.25■■□□□ 1.31
COL9A2-208ENST00000488463 KCNH8Q96L42 1107 aa23.24■■□□□ 1.31
COL9A2-208ENST00000488463 MAGI3Q5TCQ9 1506 aa23.22■■□□□ 1.31
COL9A2-208ENST00000488463 ABCA9Q8IUA7 1624 aa23.21■■□□□ 1.31
COL9A2-208ENST00000488463 COL17A1Q9UMD9 1497 aaPredicted RBP23.2■■□□□ 1.3
COL9A2-208ENST00000488463 CD109Q6YHK3 1445 aa23.2■■□□□ 1.3
COL9A2-208ENST00000488463 CDK13Q14004 1512 aaKnown RBP23.19■■□□□ 1.3
COL9A2-208ENST00000488463 TEX14Q8IWB6 1497 aa23.19■■□□□ 1.3
COL9A2-208ENST00000488463 HECW1Q76N89 1606 aa23.17■■□□□ 1.3
COL9A2-208ENST00000488463 LRRIQ1Q96JM4 1722 aa23.16■■□□□ 1.3
COL9A2-208ENST00000488463 CLIP1P30622 1438 aa23.15■■□□□ 1.3
COL9A2-208ENST00000488463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.14■■□□□ 1.29
COL9A2-208ENST00000488463 HNRNPUL2Q1KMD3 747 aaKnown RBP23.14■■□□□ 1.29
COL9A2-208ENST00000488463 PCF11O94913 1555 aaKnown RBP23.11■■□□□ 1.29
COL9A2-208ENST00000488463 CASKIN1Q8WXD9 1431 aa23.1■■□□□ 1.29
COL9A2-208ENST00000488463 PLEKHD1A6NEE1 506 aa23.1■■□□□ 1.29
COL9A2-208ENST00000488463 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.07■■□□□ 1.28
COL9A2-208ENST00000488463 KDM4FA0A1W2PPD8 638 aa23.06■■□□□ 1.28
COL9A2-208ENST00000488463 TTC37Q6PGP7 1564 aa23.05■■□□□ 1.28
COL9A2-208ENST00000488463 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
COL9A2-208ENST00000488463 CEP162Q5TB80 1403 aa23.03■■□□□ 1.28
COL9A2-208ENST00000488463 ATP1B4Q9UN42 357 aaPredicted RBP23.03■■□□□ 1.28
COL9A2-208ENST00000488463 FYCO1Q9BQS8 1478 aa23.03■■□□□ 1.28
COL9A2-208ENST00000488463 LOC105371045A0A1W2PR82 267 aa23.02■■□□□ 1.28
COL9A2-208ENST00000488463 NEO1Q92859 1461 aa22.99■■□□□ 1.27
COL9A2-208ENST00000488463 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
COL9A2-208ENST00000488463 CCDC18Q5T9S5 1454 aa22.98■■□□□ 1.27
COL9A2-208ENST00000488463 KIF14Q15058 1648 aa22.98■■□□□ 1.27
COL9A2-208ENST00000488463 PHLDB1Q86UU1 1377 aa22.98■■□□□ 1.27
COL9A2-208ENST00000488463 CDK11AQ9UQ88 783 aaPredicted RBP22.94■■□□□ 1.26
COL9A2-208ENST00000488463 PLCH2O75038 1416 aa22.91■■□□□ 1.26
COL9A2-208ENST00000488463 FRMPD1Q5SYB0 1578 aa22.91■■□□□ 1.26
COL9A2-208ENST00000488463 FANCAO15360 1455 aa22.91■■□□□ 1.26
COL9A2-208ENST00000488463 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.25
COL9A2-208ENST00000488463 MYO5CQ9NQX4 1742 aa22.88■■□□□ 1.25
COL9A2-208ENST00000488463 AKNAQ7Z591 1439 aa22.88■■□□□ 1.25
COL9A2-208ENST00000488463 RICTORQ6R327 1708 aa22.85■■□□□ 1.25
COL9A2-208ENST00000488463 RAPGEF3O95398 923 aa22.85■■□□□ 1.25
COL9A2-208ENST00000488463 CDC42BPBQ9Y5S2 1711 aa22.82■■□□□ 1.24
COL9A2-208ENST00000488463 DENND4BO75064 1496 aaPredicted RBP22.8■■□□□ 1.24
COL9A2-208ENST00000488463 PREX2Q70Z35 1606 aa22.79■■□□□ 1.24
COL9A2-208ENST00000488463 CDC42BPAQ5VT25 1732 aa22.78■■□□□ 1.24
COL9A2-208ENST00000488463 ADGRL1O94910 1474 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms