RNA–Protein interactions for RNA: ENST00000488459.1

HUWE1-212, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-212ENST00000488459 FBLN2P98095 1184 aa17.46■□□□□ 0.39
HUWE1-212ENST00000488459 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
HUWE1-212ENST00000488459 CHMP7Q8WUX9 453 aaPredicted RBP17.43■□□□□ 0.38
HUWE1-212ENST00000488459 SNAPC4Q5SXM2 1469 aa17.43■□□□□ 0.38
HUWE1-212ENST00000488459 ATP1B4Q9UN42 357 aaPredicted RBP17.42■□□□□ 0.38
HUWE1-212ENST00000488459 PBRM1Q86U86 1689 aa17.41■□□□□ 0.38
HUWE1-212ENST00000488459 EIF4G3O43432 1585 aaKnown RBP17.39■□□□□ 0.37
HUWE1-212ENST00000488459 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
HUWE1-212ENST00000488459 FHOD3Q2V2M9 1422 aa17.35■□□□□ 0.37
HUWE1-212ENST00000488459 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.37
HUWE1-212ENST00000488459 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
HUWE1-212ENST00000488459 KANK4Q5T7N3 995 aaPredicted RBP17.29■□□□□ 0.36
HUWE1-212ENST00000488459 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
HUWE1-212ENST00000488459 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
HUWE1-212ENST00000488459 CTTNBP2Q8WZ74 1663 aa17.29■□□□□ 0.36
HUWE1-212ENST00000488459 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
HUWE1-212ENST00000488459 IQGAP2Q13576 1575 aa17.23■□□□□ 0.35
HUWE1-212ENST00000488459 FMN1Q68DA7 1419 aa17.22■□□□□ 0.35
HUWE1-212ENST00000488459 CASKIN1Q8WXD9 1431 aa17.19■□□□□ 0.34
HUWE1-212ENST00000488459 JPH4Q96JJ6 628 aa17.18■□□□□ 0.34
HUWE1-212ENST00000488459 SAMD9Q5K651 1589 aa17.17■□□□□ 0.34
HUWE1-212ENST00000488459 HRCP23327 699 aa17.16■□□□□ 0.34
HUWE1-212ENST00000488459 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
HUWE1-212ENST00000488459 UGGT2Q9NYU1 1516 aa17.15■□□□□ 0.34
HUWE1-212ENST00000488459 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
HUWE1-212ENST00000488459 NUP160Q12769 1436 aa17.14■□□□□ 0.33
HUWE1-212ENST00000488459 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
HUWE1-212ENST00000488459 CEP170Q5SW79 1584 aa17.14■□□□□ 0.33
HUWE1-212ENST00000488459 ARID3CA6NKF2 412 aa17.13■□□□□ 0.33
HUWE1-212ENST00000488459 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
HUWE1-212ENST00000488459 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
HUWE1-212ENST00000488459 CARMIL2Q6F5E8 1435 aa17.09■□□□□ 0.33
HUWE1-212ENST00000488459 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
HUWE1-212ENST00000488459 DISP1Q96F81 1524 aa17.08■□□□□ 0.32
HUWE1-212ENST00000488459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
HUWE1-212ENST00000488459 MTUS2Q5JR59 1369 aa17.05■□□□□ 0.32
HUWE1-212ENST00000488459 KIAA0556O60303 1618 aa17.03■□□□□ 0.32
HUWE1-212ENST00000488459 ITGAEP38570 1179 aa17.02■□□□□ 0.32
HUWE1-212ENST00000488459 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
HUWE1-212ENST00000488459 PRG4Q92954 1404 aaPredicted RBP17.02■□□□□ 0.31
HUWE1-212ENST00000488459 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
HUWE1-212ENST00000488459 CCNB3Q8WWL7 1395 aa17■□□□□ 0.31
HUWE1-212ENST00000488459 PHLDB1Q86UU1 1377 aa16.98■□□□□ 0.31
HUWE1-212ENST00000488459 CCDC18Q5T9S5 1454 aa16.98■□□□□ 0.31
HUWE1-212ENST00000488459 CFAP43Q8NDM7 1665 aa16.97■□□□□ 0.31
HUWE1-212ENST00000488459 CHD1O14646 1710 aa16.97■□□□□ 0.31
HUWE1-212ENST00000488459 HECW1Q76N89 1606 aa16.96■□□□□ 0.31
HUWE1-212ENST00000488459 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
HUWE1-212ENST00000488459 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.3
HUWE1-212ENST00000488459 PTPRGP23470 1445 aa16.96■□□□□ 0.3
HUWE1-212ENST00000488459 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.3
HUWE1-212ENST00000488459 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
HUWE1-212ENST00000488459 CDK13Q14004 1512 aaKnown RBP16.93■□□□□ 0.3
HUWE1-212ENST00000488459 PLB1Q6P1J6 1458 aa16.93■□□□□ 0.3
HUWE1-212ENST00000488459 NUP153P49790 1475 aaKnown RBP16.9■□□□□ 0.3
HUWE1-212ENST00000488459 RAPGEF6Q8TEU7 1601 aa16.88■□□□□ 0.29
HUWE1-212ENST00000488459 NCOA2Q15596 1464 aa16.88■□□□□ 0.29
HUWE1-212ENST00000488459 EHBP1L1Q8N3D4 1523 aa16.87■□□□□ 0.29
HUWE1-212ENST00000488459 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
HUWE1-212ENST00000488459 PLEKHD1A6NEE1 506 aa16.85■□□□□ 0.29
HUWE1-212ENST00000488459 MAGI3Q5TCQ9 1506 aa16.85■□□□□ 0.29
HUWE1-212ENST00000488459 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
HUWE1-212ENST00000488459 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.28
HUWE1-212ENST00000488459 MYOM3Q5VTT5 1437 aa16.82■□□□□ 0.28
HUWE1-212ENST00000488459 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
HUWE1-212ENST00000488459 UACAQ9BZF9 1416 aa16.8■□□□□ 0.28
HUWE1-212ENST00000488459 SUPT6HQ7KZ85 1726 aaKnown RBP16.8■□□□□ 0.28
HUWE1-212ENST00000488459 ABCA8O94911 1581 aa16.8■□□□□ 0.28
HUWE1-212ENST00000488459 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
HUWE1-212ENST00000488459 ERCC6L2Q5T890 1561 aa16.79■□□□□ 0.28
HUWE1-212ENST00000488459 ATP10BO94823 1461 aa16.79■□□□□ 0.28
HUWE1-212ENST00000488459 TROQ12816 1431 aaPredicted RBP16.78■□□□□ 0.28
HUWE1-212ENST00000488459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.77■□□□□ 0.27
HUWE1-212ENST00000488459 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
HUWE1-212ENST00000488459 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
HUWE1-212ENST00000488459 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
HUWE1-212ENST00000488459 SETD5Q9C0A6 1442 aa16.71■□□□□ 0.27
HUWE1-212ENST00000488459 CHIC2Q9UKJ5 165 aa16.71■□□□□ 0.27
HUWE1-212ENST00000488459 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
HUWE1-212ENST00000488459 RAB3GAP2Q9H2M9 1393 aa16.69■□□□□ 0.26
HUWE1-212ENST00000488459 KCNH8Q96L42 1107 aa16.69■□□□□ 0.26
HUWE1-212ENST00000488459 ZNF644Q9H582 1327 aaPredicted RBP16.69■□□□□ 0.26
HUWE1-212ENST00000488459 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
HUWE1-212ENST00000488459 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
HUWE1-212ENST00000488459 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
HUWE1-212ENST00000488459 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
HUWE1-212ENST00000488459 TCOF1Q13428 1488 aaKnown RBP16.65■□□□□ 0.26
HUWE1-212ENST00000488459 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
HUWE1-212ENST00000488459 GPATCH8Q9UKJ3 1502 aaKnown RBP16.63■□□□□ 0.25
HUWE1-212ENST00000488459 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
HUWE1-212ENST00000488459 KIF14Q15058 1648 aa16.61■□□□□ 0.25
HUWE1-212ENST00000488459 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
HUWE1-212ENST00000488459 ABCC10Q5T3U5 1492 aa16.58■□□□□ 0.24
HUWE1-212ENST00000488459 ADCY10Q96PN6 1610 aa16.56■□□□□ 0.24
HUWE1-212ENST00000488459 ABCC5O15440 1437 aa16.55■□□□□ 0.24
HUWE1-212ENST00000488459 DAPK1P53355 1430 aa16.55■□□□□ 0.24
HUWE1-212ENST00000488459 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
HUWE1-212ENST00000488459 TRIM52Q96A61 297 aa16.55■□□□□ 0.24
HUWE1-212ENST00000488459 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
HUWE1-212ENST00000488459 CAMSAP2Q08AD1 1489 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms