RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 GRIN2AQ12879 1464 aa11.05□□□□□ -0.64
PDAP1-203ENST00000488214 IQGAP2Q13576 1575 aa11.03□□□□□ -0.64
PDAP1-203ENST00000488214 RANGAP1P46060 587 aaPredicted RBP11.03□□□□□ -0.64
PDAP1-203ENST00000488214 EFCAB5A4FU69 1503 aa11.02□□□□□ -0.65
PDAP1-203ENST00000488214 CEP170Q5SW79 1584 aa11.02□□□□□ -0.65
PDAP1-203ENST00000488214 ARAP1Q96P48 1450 aa11.01□□□□□ -0.65
PDAP1-203ENST00000488214 SAMD9Q5K651 1589 aa11□□□□□ -0.65
PDAP1-203ENST00000488214 ARHGAP35Q9NRY4 1499 aa11□□□□□ -0.65
PDAP1-203ENST00000488214 VPS8Q8N3P4 1428 aa10.97□□□□□ -0.65
PDAP1-203ENST00000488214 PCF11O94913 1555 aaKnown RBP10.95□□□□□ -0.66
PDAP1-203ENST00000488214 NUP160Q12769 1436 aa10.94□□□□□ -0.66
PDAP1-203ENST00000488214 FBLN2P98095 1184 aa10.94□□□□□ -0.66
PDAP1-203ENST00000488214 CHMP7Q8WUX9 453 aaPredicted RBP10.94□□□□□ -0.66
PDAP1-203ENST00000488214 KIAA0556O60303 1618 aa10.94□□□□□ -0.66
PDAP1-203ENST00000488214 KIAA0586Q9BVV6 1533 aa10.94□□□□□ -0.66
PDAP1-203ENST00000488214 FHOD3Q2V2M9 1422 aa10.93□□□□□ -0.66
PDAP1-203ENST00000488214 UGGT2Q9NYU1 1516 aa10.93□□□□□ -0.66
PDAP1-203ENST00000488214 CFAP43Q8NDM7 1665 aa10.92□□□□□ -0.66
PDAP1-203ENST00000488214 LRRIQ1Q96JM4 1722 aa10.88□□□□□ -0.67
PDAP1-203ENST00000488214 CLASP1Q7Z460 1538 aa10.88□□□□□ -0.67
PDAP1-203ENST00000488214 SHROOM2Q13796 1616 aa10.87□□□□□ -0.67
PDAP1-203ENST00000488214 DISP1Q96F81 1524 aa10.87□□□□□ -0.67
PDAP1-203ENST00000488214 FYCO1Q9BQS8 1478 aa10.87□□□□□ -0.67
PDAP1-203ENST00000488214 P3H3Q8IVL6 736 aa10.86□□□□□ -0.67
PDAP1-203ENST00000488214 HECW1Q76N89 1606 aa10.86□□□□□ -0.67
PDAP1-203ENST00000488214 FMN1Q68DA7 1419 aa10.85□□□□□ -0.67
PDAP1-203ENST00000488214 TIAM1Q13009 1591 aa10.85□□□□□ -0.67
PDAP1-203ENST00000488214 CASKIN1Q8WXD9 1431 aa10.83□□□□□ -0.68
PDAP1-203ENST00000488214 RAPGEF6Q8TEU7 1601 aa10.82□□□□□ -0.68
PDAP1-203ENST00000488214 PPARGC1BQ86YN6 1023 aaKnown RBP10.81□□□□□ -0.68
PDAP1-203ENST00000488214 CARMIL2Q6F5E8 1435 aa10.81□□□□□ -0.68
PDAP1-203ENST00000488214 APLP2Q06481 763 aa10.8□□□□□ -0.68
PDAP1-203ENST00000488214 TTBK1Q5TCY1 1321 aaPredicted RBP10.8□□□□□ -0.68
PDAP1-203ENST00000488214 ERCC6L2Q5T890 1561 aa10.78□□□□□ -0.68
PDAP1-203ENST00000488214 PRG4Q92954 1404 aaPredicted RBP10.78□□□□□ -0.68
PDAP1-203ENST00000488214 MAP3K1Q13233 1512 aa10.78□□□□□ -0.68
PDAP1-203ENST00000488214 CCDC18Q5T9S5 1454 aa10.77□□□□□ -0.69
PDAP1-203ENST00000488214 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
PDAP1-203ENST00000488214 ATP1B4Q9UN42 357 aaPredicted RBP10.75□□□□□ -0.69
PDAP1-203ENST00000488214 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
PDAP1-203ENST00000488214 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
PDAP1-203ENST00000488214 ABCA8O94911 1581 aa10.74□□□□□ -0.69
PDAP1-203ENST00000488214 LRRC9Q6ZRR7 1453 aa10.74□□□□□ -0.69
PDAP1-203ENST00000488214 NUP153P49790 1475 aaKnown RBP10.73□□□□□ -0.69
PDAP1-203ENST00000488214 PLB1Q6P1J6 1458 aa10.73□□□□□ -0.69
PDAP1-203ENST00000488214 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
PDAP1-203ENST00000488214 SUPT6HQ7KZ85 1726 aaKnown RBP10.72□□□□□ -0.69
PDAP1-203ENST00000488214 TRIM26Q12899 539 aaPredicted RBP10.7□□□□□ -0.7
PDAP1-203ENST00000488214 MAGI3Q5TCQ9 1506 aa10.69□□□□□ -0.7
PDAP1-203ENST00000488214 PCGF6Q9BYE7 350 aa10.69□□□□□ -0.7
PDAP1-203ENST00000488214 KANK4Q5T7N3 995 aaPredicted RBP10.68□□□□□ -0.7
PDAP1-203ENST00000488214 ABCC2Q92887 1545 aa10.68□□□□□ -0.7
PDAP1-203ENST00000488214 PTPRGP23470 1445 aa10.67□□□□□ -0.7
PDAP1-203ENST00000488214 ARID3CA6NKF2 412 aa10.67□□□□□ -0.7
PDAP1-203ENST00000488214 MTUS2Q5JR59 1369 aa10.66□□□□□ -0.7
PDAP1-203ENST00000488214 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
PDAP1-203ENST00000488214 ZCCHC11Q5TAX3 1644 aaKnown RBP10.66□□□□□ -0.7
PDAP1-203ENST00000488214 OSCARQ8IYS5 282 aa10.65□□□□□ -0.7
PDAP1-203ENST00000488214 KIF14Q15058 1648 aa10.64□□□□□ -0.71
PDAP1-203ENST00000488214 UACAQ9BZF9 1416 aa10.64□□□□□ -0.71
PDAP1-203ENST00000488214 ITSN2Q9NZM3 1697 aa10.63□□□□□ -0.71
PDAP1-203ENST00000488214 NCOA2Q15596 1464 aa10.63□□□□□ -0.71
PDAP1-203ENST00000488214 ARHGEF11O15085 1522 aa10.62□□□□□ -0.71
PDAP1-203ENST00000488214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.61□□□□□ -0.71
PDAP1-203ENST00000488214 HNRNPUL2Q1KMD3 747 aaKnown RBP10.61□□□□□ -0.71
PDAP1-203ENST00000488214 RIMBP3CA6NJZ7 1639 aa10.61□□□□□ -0.71
PDAP1-203ENST00000488214 RIMBP3BA6NNM3 1639 aa10.61□□□□□ -0.71
PDAP1-203ENST00000488214 PHLDB1Q86UU1 1377 aa10.61□□□□□ -0.71
PDAP1-203ENST00000488214 RIMBP3Q9UFD9 1639 aa10.61□□□□□ -0.71
PDAP1-203ENST00000488214 UHRF1BP1LA0JNW5 1464 aa10.61□□□□□ -0.71
PDAP1-203ENST00000488214 RRBP1Q9P2E9 1410 aaKnown RBP10.6□□□□□ -0.71
PDAP1-203ENST00000488214 ATP10BO94823 1461 aa10.6□□□□□ -0.71
PDAP1-203ENST00000488214 TROQ12816 1431 aaPredicted RBP10.59□□□□□ -0.71
PDAP1-203ENST00000488214 PTPN23Q9H3S7 1636 aa10.58□□□□□ -0.72
PDAP1-203ENST00000488214 CDC42BPAQ5VT25 1732 aa10.58□□□□□ -0.72
PDAP1-203ENST00000488214 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
PDAP1-203ENST00000488214 CCNB3Q8WWL7 1395 aa10.57□□□□□ -0.72
PDAP1-203ENST00000488214 KDM5BQ9UGL1 1544 aa10.57□□□□□ -0.72
PDAP1-203ENST00000488214 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
PDAP1-203ENST00000488214 TTC37Q6PGP7 1564 aa10.56□□□□□ -0.72
PDAP1-203ENST00000488214 MYO5CQ9NQX4 1742 aa10.55□□□□□ -0.72
PDAP1-203ENST00000488214 PREX2Q70Z35 1606 aa10.55□□□□□ -0.72
PDAP1-203ENST00000488214 CDK11AQ9UQ88 783 aaPredicted RBP10.55□□□□□ -0.72
PDAP1-203ENST00000488214 CROCC2H7BZ55 1655 aa10.52□□□□□ -0.73
PDAP1-203ENST00000488214 CDC42BPBQ9Y5S2 1711 aa10.52□□□□□ -0.73
PDAP1-203ENST00000488214 ABCC10Q5T3U5 1492 aa10.51□□□□□ -0.73
PDAP1-203ENST00000488214 TCOF1Q13428 1488 aaKnown RBP10.5□□□□□ -0.73
PDAP1-203ENST00000488214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.5□□□□□ -0.73
PDAP1-203ENST00000488214 WDR7Q9Y4E6 1490 aa10.49□□□□□ -0.73
PDAP1-203ENST00000488214 DNMT1P26358 1616 aaKnown RBP10.49□□□□□ -0.73
PDAP1-203ENST00000488214 PLEKHD1A6NEE1 506 aa10.49□□□□□ -0.73
PDAP1-203ENST00000488214 FAM50AQ14320 339 aaKnown RBP10.49□□□□□ -0.73
PDAP1-203ENST00000488214 ADGBQ8N7X0 1667 aa10.49□□□□□ -0.73
PDAP1-203ENST00000488214 MIA2Q96PC5 1412 aa10.49□□□□□ -0.73
PDAP1-203ENST00000488214 CAMSAP2Q08AD1 1489 aa10.49□□□□□ -0.73
PDAP1-203ENST00000488214 GPATCH8Q9UKJ3 1502 aaKnown RBP10.48□□□□□ -0.73
PDAP1-203ENST00000488214 GCC2Q8IWJ2 1684 aa10.47□□□□□ -0.73
PDAP1-203ENST00000488214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.47□□□□□ -0.732e-8■■■■□ 23.1
PDAP1-203ENST00000488214 ABCA9Q8IUA7 1624 aa10.47□□□□□ -0.73
PDAP1-203ENST00000488214 ITGAEP38570 1179 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms