RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
LDLRAP1-207ENST00000488127 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
LDLRAP1-207ENST00000488127 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
LDLRAP1-207ENST00000488127 CFDP1Q9UEE9 299 aaPredicted RBP16.21■□□□□ 0.18
LDLRAP1-207ENST00000488127 TONSLQ96HA7 1378 aa16.18■□□□□ 0.18
LDLRAP1-207ENST00000488127 KDM2AQ9Y2K7 1162 aa16.17■□□□□ 0.18
LDLRAP1-207ENST00000488127 ANP32CO43423 234 aa16.15■□□□□ 0.18
LDLRAP1-207ENST00000488127 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
LDLRAP1-207ENST00000488127 FANCD2Q9BXW9 1451 aa16.08■□□□□ 0.16
LDLRAP1-207ENST00000488127 ARID4BQ4LE39 1312 aaPredicted RBP16.08■□□□□ 0.16
LDLRAP1-207ENST00000488127 HIRIP3Q9BW71 556 aaPredicted RBP16.06■□□□□ 0.16
LDLRAP1-207ENST00000488127 CLSPNQ9HAW4 1339 aa16.06■□□□□ 0.16
LDLRAP1-207ENST00000488127 RGL3Q3MIN7 710 aa16.05■□□□□ 0.16
LDLRAP1-207ENST00000488127 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
LDLRAP1-207ENST00000488127 DDX10Q13206 875 aaKnown RBP16.01■□□□□ 0.15
LDLRAP1-207ENST00000488127 KANK4Q5T7N3 995 aaPredicted RBP16■□□□□ 0.15
LDLRAP1-207ENST00000488127 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
LDLRAP1-207ENST00000488127 FHAD1B1AJZ9 1412 aa15.99■□□□□ 0.15
LDLRAP1-207ENST00000488127 EIF5BO60841 1220 aaKnown RBP15.99■□□□□ 0.15
LDLRAP1-207ENST00000488127 FKBP8Q14318 412 aa15.98■□□□□ 0.15
LDLRAP1-207ENST00000488127 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
LDLRAP1-207ENST00000488127 CCNB3Q8WWL7 1395 aa15.98■□□□□ 0.15
LDLRAP1-207ENST00000488127 JPH4Q96JJ6 628 aa15.97■□□□□ 0.15
LDLRAP1-207ENST00000488127 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
LDLRAP1-207ENST00000488127 CARMIL2Q6F5E8 1435 aa15.95■□□□□ 0.14
LDLRAP1-207ENST00000488127 MLECQ14165 292 aa15.94■□□□□ 0.14
LDLRAP1-207ENST00000488127 PPP1R15AO75807 674 aaPredicted RBP15.92■□□□□ 0.14
LDLRAP1-207ENST00000488127 RAPGEF2Q9Y4G8 1499 aa15.92■□□□□ 0.14
LDLRAP1-207ENST00000488127 ANP32AP39687 249 aaKnown RBP15.92■□□□□ 0.14
LDLRAP1-207ENST00000488127 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
LDLRAP1-207ENST00000488127 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
LDLRAP1-207ENST00000488127 PLEKHG5O94827 1062 aa15.9■□□□□ 0.14
LDLRAP1-207ENST00000488127 SIN3AQ96ST3 1273 aa15.89■□□□□ 0.14
LDLRAP1-207ENST00000488127 NESP48681 1621 aa15.89■□□□□ 0.13
LDLRAP1-207ENST00000488127 VPS8Q8N3P4 1428 aa15.89■□□□□ 0.13
LDLRAP1-207ENST00000488127 NEFMP07197 916 aa15.87■□□□□ 0.13
LDLRAP1-207ENST00000488127 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
LDLRAP1-207ENST00000488127 FGD5Q6ZNL6 1462 aa15.86■□□□□ 0.13
LDLRAP1-207ENST00000488127 BCL11AQ9H165 835 aa15.86■□□□□ 0.13
LDLRAP1-207ENST00000488127 SALL2Q9Y467 1007 aaPredicted RBP15.85■□□□□ 0.13
LDLRAP1-207ENST00000488127 GGT6Q6P531 493 aa15.84■□□□□ 0.13
LDLRAP1-207ENST00000488127 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.13
LDLRAP1-207ENST00000488127 NPM2Q86SE8 214 aaKnown RBP15.82■□□□□ 0.12
LDLRAP1-207ENST00000488127 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■■■■ 43.1
LDLRAP1-207ENST00000488127 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
LDLRAP1-207ENST00000488127 FMN1Q68DA7 1419 aa15.81■□□□□ 0.12
LDLRAP1-207ENST00000488127 OSCARQ8IYS5 282 aa15.81■□□□□ 0.12
LDLRAP1-207ENST00000488127 MIER1Q8N108 512 aa15.81■□□□□ 0.12
LDLRAP1-207ENST00000488127 IGF1RP08069 1367 aa15.8■□□□□ 0.12
LDLRAP1-207ENST00000488127 EIF4G2P78344 907 aaKnown RBP eCLIP15.8■□□□□ 0.12
LDLRAP1-207ENST00000488127 C14orf37Q86TY3 774 aa15.8■□□□□ 0.12
LDLRAP1-207ENST00000488127 ANP32EQ9BTT0 268 aa15.79■□□□□ 0.12
LDLRAP1-207ENST00000488127 NBR1Q14596 966 aa15.79■□□□□ 0.12
LDLRAP1-207ENST00000488127 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
LDLRAP1-207ENST00000488127 EFCAB2Q5VUJ9 269 aa15.78■□□□□ 0.12
LDLRAP1-207ENST00000488127 FOXD1Q16676 465 aa15.77■□□□□ 0.12
LDLRAP1-207ENST00000488127 TMC1Q8TDI8 760 aa15.77■□□□□ 0.12
LDLRAP1-207ENST00000488127 HNRNPMP52272 730 aaKnown RBP eCLIP15.76■□□□□ 0.11
LDLRAP1-207ENST00000488127 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
LDLRAP1-207ENST00000488127 ARHGAP35Q9NRY4 1499 aa15.74■□□□□ 0.11
LDLRAP1-207ENST00000488127 BICRAQ9NZM4 1560 aa15.74■□□□□ 0.11
LDLRAP1-207ENST00000488127 HNRNPUQ00839 825 aaKnown RBP eCLIP15.73■□□□□ 0.11
LDLRAP1-207ENST00000488127 CARD11Q9BXL7 1154 aa15.72■□□□□ 0.11
LDLRAP1-207ENST00000488127 PTPRGP23470 1445 aa15.72■□□□□ 0.11
LDLRAP1-207ENST00000488127 CFTRP13569 1480 aa15.72■□□□□ 0.11
LDLRAP1-207ENST00000488127 ZBTB7CA1YPR0 619 aa15.7■□□□□ 0.1
LDLRAP1-207ENST00000488127 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
LDLRAP1-207ENST00000488127 SENP3-EIF4A1A0A087X0R7 540 aa15.7■□□□□ 0.1
LDLRAP1-207ENST00000488127 PKD2Q13563 968 aa15.69■□□□□ 0.1
LDLRAP1-207ENST00000488127 MRS2Q9HD23 443 aa15.68■□□□□ 0.1
LDLRAP1-207ENST00000488127 KIF3BO15066 747 aa15.67■□□□□ 0.1
LDLRAP1-207ENST00000488127 GLIPR1L2Q4G1C9 344 aa15.66■□□□□ 0.1
LDLRAP1-207ENST00000488127 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
LDLRAP1-207ENST00000488127 KANK1Q14678 1352 aa15.63■□□□□ 0.09
LDLRAP1-207ENST00000488127 POGKQ9P215 609 aa15.63■□□□□ 0.09
LDLRAP1-207ENST00000488127 SETD5Q9C0A6 1442 aa15.62■□□□□ 0.09
LDLRAP1-207ENST00000488127 SAFB2Q14151 953 aaKnown RBP eCLIP15.62■□□□□ 0.09
LDLRAP1-207ENST00000488127 NUP155O75694 1391 aa15.62■□□□□ 0.09
LDLRAP1-207ENST00000488127 SPAG9O60271 1321 aaKnown RBP15.61■□□□□ 0.09
LDLRAP1-207ENST00000488127 WDR43Q15061 677 aaKnown RBP eCLIP15.61■□□□□ 0.09
LDLRAP1-207ENST00000488127 A0A0G2JS52 829 aa15.6■□□□□ 0.09
LDLRAP1-207ENST00000488127 HMGXB3Q12766 1538 aa15.6■□□□□ 0.09
LDLRAP1-207ENST00000488127 PPM1GO15355 546 aaPredicted RBP15.59■□□□□ 0.09
LDLRAP1-207ENST00000488127 LMOD2Q6P5Q4 547 aa15.59■□□□□ 0.09
LDLRAP1-207ENST00000488127 IRX6P78412 446 aaPredicted RBP15.58■□□□□ 0.09
LDLRAP1-207ENST00000488127 MPHOSPH9Q99550 1183 aa15.58■□□□□ 0.09
LDLRAP1-207ENST00000488127 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.09
LDLRAP1-207ENST00000488127 ANKRD30AQ9BXX3 1397 aa15.57■□□□□ 0.08
LDLRAP1-207ENST00000488127 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
LDLRAP1-207ENST00000488127 CCDC18Q5T9S5 1454 aa15.57■□□□□ 0.08
LDLRAP1-207ENST00000488127 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
LDLRAP1-207ENST00000488127 STK26Q9P289 416 aa15.56■□□□□ 0.08
LDLRAP1-207ENST00000488127 TOPBP1Q92547 1522 aa15.56■□□□□ 0.08
LDLRAP1-207ENST00000488127 CCDC136Q96JN2 1154 aa15.55■□□□□ 0.08
LDLRAP1-207ENST00000488127 GRIN2BQ13224 1484 aa15.55■□□□□ 0.08
LDLRAP1-207ENST00000488127 TNNT2P45379 298 aaPredicted RBP15.54■□□□□ 0.08
LDLRAP1-207ENST00000488127 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
LDLRAP1-207ENST00000488127 NUTM2DQ5VT03 806 aaPredicted RBP15.54■□□□□ 0.08
LDLRAP1-207ENST00000488127 KNSTRNQ9Y448 316 aa15.54■□□□□ 0.08
LDLRAP1-207ENST00000488127 HAP1P54257 671 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms