RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 KIAA0586Q9BVV6 1533 aa22.86■■□□□ 1.25
NUP188-207ENST00000487952 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
NUP188-207ENST00000487952 IQGAP2Q13576 1575 aa22.8■■□□□ 1.24
NUP188-207ENST00000487952 CTTNBP2Q8WZ74 1663 aa22.79■■□□□ 1.24
NUP188-207ENST00000487952 LOC105371045A0A1W2PR82 267 aa22.77■■□□□ 1.24
NUP188-207ENST00000487952 JPH4Q96JJ6 628 aa22.76■■□□□ 1.23
NUP188-207ENST00000487952 TNIKQ9UKE5 1360 aa22.73■■□□□ 1.23
NUP188-207ENST00000487952 RANGAP1P46060 587 aaPredicted RBP22.7■■□□□ 1.22
NUP188-207ENST00000487952 SHROOM2Q13796 1616 aa22.68■■□□□ 1.22
NUP188-207ENST00000487952 PRG4Q92954 1404 aaPredicted RBP22.68■■□□□ 1.22
NUP188-207ENST00000487952 UGGT2Q9NYU1 1516 aa22.67■■□□□ 1.22
NUP188-207ENST00000487952 CARMIL2Q6F5E8 1435 aa22.65■■□□□ 1.22
NUP188-207ENST00000487952 DNAJC5Q9H3Z4 198 aa22.62■■□□□ 1.21
NUP188-207ENST00000487952 ARHGEF11O15085 1522 aa22.6■■□□□ 1.21
NUP188-207ENST00000487952 DISP1Q96F81 1524 aa22.57■■□□□ 1.2
NUP188-207ENST00000487952 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
NUP188-207ENST00000487952 ERCC6L2Q5T890 1561 aa22.56■■□□□ 1.2
NUP188-207ENST00000487952 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
NUP188-207ENST00000487952 KIAA0556O60303 1618 aa22.56■■□□□ 1.2
NUP188-207ENST00000487952 CLIP1P30622 1438 aa22.56■■□□□ 1.2
NUP188-207ENST00000487952 CEP162Q5TB80 1403 aa22.55■■□□□ 1.2
NUP188-207ENST00000487952 SAMD9Q5K651 1589 aa22.53■■□□□ 1.2
NUP188-207ENST00000487952 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
NUP188-207ENST00000487952 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
NUP188-207ENST00000487952 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
NUP188-207ENST00000487952 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
NUP188-207ENST00000487952 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
NUP188-207ENST00000487952 PTPRGP23470 1445 aa22.48■■□□□ 1.19
NUP188-207ENST00000487952 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
NUP188-207ENST00000487952 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
NUP188-207ENST00000487952 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
NUP188-207ENST00000487952 FMN1Q68DA7 1419 aa22.38■■□□□ 1.17
NUP188-207ENST00000487952 UACAQ9BZF9 1416 aa22.32■■□□□ 1.16
NUP188-207ENST00000487952 PLB1Q6P1J6 1458 aa22.3■■□□□ 1.16
NUP188-207ENST00000487952 ATP1B4Q9UN42 357 aaPredicted RBP22.28■■□□□ 1.16
NUP188-207ENST00000487952 ABCA8O94911 1581 aa22.27■■□□□ 1.16
NUP188-207ENST00000487952 ABCC2Q92887 1545 aa22.26■■□□□ 1.15
NUP188-207ENST00000487952 RAPGEF6Q8TEU7 1601 aa22.26■■□□□ 1.15
NUP188-207ENST00000487952 UHRF1BP1LA0JNW5 1464 aa22.25■■□□□ 1.15
NUP188-207ENST00000487952 VPS8Q8N3P4 1428 aa22.24■■□□□ 1.15
NUP188-207ENST00000487952 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
NUP188-207ENST00000487952 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
NUP188-207ENST00000487952 ADCY10Q96PN6 1610 aa22.21■■□□□ 1.15
NUP188-207ENST00000487952 PCF11O94913 1555 aaKnown RBP22.21■■□□□ 1.15
NUP188-207ENST00000487952 FYCO1Q9BQS8 1478 aa22.2■■□□□ 1.14
NUP188-207ENST00000487952 HECW1Q76N89 1606 aa22.2■■□□□ 1.14
NUP188-207ENST00000487952 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
NUP188-207ENST00000487952 NUP153P49790 1475 aaKnown RBP22.17■■□□□ 1.14
NUP188-207ENST00000487952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
NUP188-207ENST00000487952 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
NUP188-207ENST00000487952 KDM5BQ9UGL1 1544 aa22.14■■□□□ 1.13
NUP188-207ENST00000487952 ATP10BO94823 1461 aa22.11■■□□□ 1.13
NUP188-207ENST00000487952 CCDC18Q5T9S5 1454 aa22.11■■□□□ 1.13
NUP188-207ENST00000487952 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
NUP188-207ENST00000487952 APLP2Q06481 763 aa22.1■■□□□ 1.13
NUP188-207ENST00000487952 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
NUP188-207ENST00000487952 CDK13Q14004 1512 aaKnown RBP22.08■■□□□ 1.13
NUP188-207ENST00000487952 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
NUP188-207ENST00000487952 PLEKHD1A6NEE1 506 aa22.03■■□□□ 1.12
NUP188-207ENST00000487952 ASXL2Q76L83 1435 aa22.01■■□□□ 1.11
NUP188-207ENST00000487952 MAPKBP1O60336 1514 aa22.01■■□□□ 1.11
NUP188-207ENST00000487952 LRRIQ1Q96JM4 1722 aa21.99■■□□□ 1.11
NUP188-207ENST00000487952 WDR7Q9Y4E6 1490 aa21.97■■□□□ 1.11
NUP188-207ENST00000487952 TIAM1Q13009 1591 aa21.97■■□□□ 1.11
NUP188-207ENST00000487952 MAP3K1Q13233 1512 aa21.96■■□□□ 1.11
NUP188-207ENST00000487952 MTUS2Q5JR59 1369 aa21.96■■□□□ 1.11
NUP188-207ENST00000487952 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
NUP188-207ENST00000487952 TROQ12816 1431 aaPredicted RBP21.94■■□□□ 1.1
NUP188-207ENST00000487952 KCNH8Q96L42 1107 aa21.93■■□□□ 1.1
NUP188-207ENST00000487952 EHBP1L1Q8N3D4 1523 aa21.9■■□□□ 1.1
NUP188-207ENST00000487952 LRRC9Q6ZRR7 1453 aa21.88■■□□□ 1.09
NUP188-207ENST00000487952 MAGI3Q5TCQ9 1506 aa21.87■■□□□ 1.09
NUP188-207ENST00000487952 ABCC10Q5T3U5 1492 aa21.87■■□□□ 1.09
NUP188-207ENST00000487952 TRHP20396 242 aaPredicted RBP21.86■■□□□ 1.09
NUP188-207ENST00000487952 FAM69CQ0P6D2 419 aa21.86■■□□□ 1.09
NUP188-207ENST00000487952 KANK4Q5T7N3 995 aaPredicted RBP21.86■■□□□ 1.09
NUP188-207ENST00000487952 KIF14Q15058 1648 aa21.85■■□□□ 1.09
NUP188-207ENST00000487952 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
NUP188-207ENST00000487952 GLI2P10070 1586 aa21.79■■□□□ 1.08
NUP188-207ENST00000487952 PPARGC1BQ86YN6 1023 aaKnown RBP21.78■■□□□ 1.08
NUP188-207ENST00000487952 SUPT6HQ7KZ85 1726 aaKnown RBP21.77■■□□□ 1.08
NUP188-207ENST00000487952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.76■■□□□ 1.07
NUP188-207ENST00000487952 ABCA9Q8IUA7 1624 aa21.75■■□□□ 1.07
NUP188-207ENST00000487952 NCOA2Q15596 1464 aa21.75■■□□□ 1.07
NUP188-207ENST00000487952 CCNB3Q8WWL7 1395 aa21.74■■□□□ 1.07
NUP188-207ENST00000487952 CD109Q6YHK3 1445 aa21.74■■□□□ 1.07
NUP188-207ENST00000487952 TTC37Q6PGP7 1564 aa21.73■■□□□ 1.07
NUP188-207ENST00000487952 KIF13AQ9H1H9 1805 aa21.71■■□□□ 1.07
NUP188-207ENST00000487952 MAP3K4Q9Y6R4 1608 aa21.69■■□□□ 1.06
NUP188-207ENST00000487952 PLCH2O75038 1416 aa21.66■■□□□ 1.06
NUP188-207ENST00000487952 MYO5CQ9NQX4 1742 aa21.66■■□□□ 1.06
NUP188-207ENST00000487952 GPATCH8Q9UKJ3 1502 aaKnown RBP21.65■■□□□ 1.06
NUP188-207ENST00000487952 CFDP1Q9UEE9 299 aaPredicted RBP21.65■■□□□ 1.06
NUP188-207ENST00000487952 ARHGAP5Q13017 1502 aa21.65■■□□□ 1.06
NUP188-207ENST00000487952 TEX14Q8IWB6 1497 aa21.64■■□□□ 1.06
NUP188-207ENST00000487952 EFCAB2Q5VUJ9 269 aa21.64■■□□□ 1.05
NUP188-207ENST00000487952 MYOM3Q5VTT5 1437 aa21.63■■□□□ 1.05
NUP188-207ENST00000487952 ITSN2Q9NZM3 1697 aa21.63■■□□□ 1.05
NUP188-207ENST00000487952 PHLDB1Q86UU1 1377 aa21.62■■□□□ 1.05
NUP188-207ENST00000487952 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms