RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 PRG4Q92954 1404 aaPredicted RBP35.22■■■■□ 3.23
TRIM8-204ENST00000487927 JPH4Q96JJ6 628 aa35.19■■■■□ 3.22
TRIM8-204ENST00000487927 KIAA0586Q9BVV6 1533 aa35.07■■■■□ 3.21
TRIM8-204ENST00000487927 CARMIL1Q5VZK9 1371 aa35.02■■■■□ 3.2
TRIM8-204ENST00000487927 KIF13AQ9H1H9 1805 aa34.85■■■■□ 3.17
TRIM8-204ENST00000487927 ADCY10Q96PN6 1610 aa34.85■■■■□ 3.17
TRIM8-204ENST00000487927 IQGAP2Q13576 1575 aa34.79■■■■□ 3.16
TRIM8-204ENST00000487927 RAPGEF2Q9Y4G8 1499 aa34.74■■■■□ 3.15
TRIM8-204ENST00000487927 MAPKBP1O60336 1514 aa34.73■■■■□ 3.15
TRIM8-204ENST00000487927 NPM1P06748 294 aaKnown RBP eCLIP34.68■■■■□ 3.14
TRIM8-204ENST00000487927 PTPRGP23470 1445 aa34.67■■■■□ 3.14
TRIM8-204ENST00000487927 CARMIL2Q6F5E8 1435 aa34.67■■■■□ 3.14
TRIM8-204ENST00000487927 ABCC10Q5T3U5 1492 aa34.65■■■■□ 3.14
TRIM8-204ENST00000487927 TNIKQ9UKE5 1360 aa34.64■■■■□ 3.14
TRIM8-204ENST00000487927 DISP1Q96F81 1524 aa34.63■■■■□ 3.13
TRIM8-204ENST00000487927 DIP2BQ9P265 1576 aa34.62■■■■□ 3.13
TRIM8-204ENST00000487927 UGGT2Q9NYU1 1516 aa34.59■■■■□ 3.13
TRIM8-204ENST00000487927 TTBK1Q5TCY1 1321 aaPredicted RBP34.56■■■■□ 3.12
TRIM8-204ENST00000487927 FAM69CQ0P6D2 419 aa34.56■■■■□ 3.12
TRIM8-204ENST00000487927 CTTNBP2Q8WZ74 1663 aa34.53■■■■□ 3.12
TRIM8-204ENST00000487927 KIAA0556O60303 1618 aa34.5■■■■□ 3.11
TRIM8-204ENST00000487927 ABCC2Q92887 1545 aa34.5■■■■□ 3.11
TRIM8-204ENST00000487927 UHRF1BP1LA0JNW5 1464 aa34.47■■■■□ 3.11
TRIM8-204ENST00000487927 PRXQ9BXM0 1461 aa34.47■■■■□ 3.11
TRIM8-204ENST00000487927 UACAQ9BZF9 1416 aa34.44■■■■□ 3.1
TRIM8-204ENST00000487927 TSPOAP1O95153 1857 aa34.37■■■■□ 3.09
TRIM8-204ENST00000487927 ASXL2Q76L83 1435 aa34.36■■■■□ 3.09
TRIM8-204ENST00000487927 KDM5BQ9UGL1 1544 aa34.32■■■■□ 3.08
TRIM8-204ENST00000487927 PLB1Q6P1J6 1458 aa34.31■■■■□ 3.08
TRIM8-204ENST00000487927 ZCCHC11Q5TAX3 1644 aaKnown RBP34.28■■■■□ 3.08
TRIM8-204ENST00000487927 GOLGA3Q08378 1498 aa34.27■■■■□ 3.08
TRIM8-204ENST00000487927 GLI2P10070 1586 aa34.26■■■■□ 3.07
TRIM8-204ENST00000487927 KDM6BO15054 1643 aa34.22■■■■□ 3.07
TRIM8-204ENST00000487927 PPRC1Q5VV67 1664 aaKnown RBP34.22■■■■□ 3.07
TRIM8-204ENST00000487927 CSRNP3Q8WYN3 585 aa34.2■■■■□ 3.07
TRIM8-204ENST00000487927 ABCA8O94911 1581 aa34.17■■■■□ 3.06
TRIM8-204ENST00000487927 EPRSP07814 1512 aaKnown RBP34.16■■■■□ 3.06
TRIM8-204ENST00000487927 AEBP2Q6ZN18 517 aaPredicted RBP34.16■■■■□ 3.06
TRIM8-204ENST00000487927 EEA1Q15075 1411 aa34.11■■■■□ 3.05
TRIM8-204ENST00000487927 MAP3K4Q9Y6R4 1608 aa34.11■■■■□ 3.05
TRIM8-204ENST00000487927 WDR7Q9Y4E6 1490 aa34.05■■■■□ 3.04
TRIM8-204ENST00000487927 SAMD9Q5K651 1589 aa34.04■■■■□ 3.04
TRIM8-204ENST00000487927 P3H3Q8IVL6 736 aa33.99■■■■□ 3.03
TRIM8-204ENST00000487927 FAM9AQ8IZU1 332 aaPredicted RBP33.93■■■■□ 3.02
TRIM8-204ENST00000487927 TEX14Q8IWB6 1497 aa33.91■■■■□ 3.02
TRIM8-204ENST00000487927 COL17A1Q9UMD9 1497 aaPredicted RBP33.91■■■■□ 3.02
TRIM8-204ENST00000487927 KIF21BO75037 1637 aa33.9■■■■□ 3.02
TRIM8-204ENST00000487927 CFAP43Q8NDM7 1665 aa33.88■■■■□ 3.01
TRIM8-204ENST00000487927 ATP10BO94823 1461 aa33.86■■■■□ 3.01
TRIM8-204ENST00000487927 RAPGEF6Q8TEU7 1601 aa33.84■■■■□ 3.01
TRIM8-204ENST00000487927 KCNH8Q96L42 1107 aa33.83■■■■□ 3.01
TRIM8-204ENST00000487927 ARID3CA6NKF2 412 aa33.81■■■■□ 3
TRIM8-204ENST00000487927 CD109Q6YHK3 1445 aa33.8■■■■□ 3
TRIM8-204ENST00000487927 MAGI3Q5TCQ9 1506 aa33.8■■■■□ 3
TRIM8-204ENST00000487927 CHIC1Q5VXU3 224 aa33.79■■■■□ 3
TRIM8-204ENST00000487927 KDM4FA0A1W2PPD8 638 aa33.77■■■■□ 3
TRIM8-204ENST00000487927 RANGAP1P46060 587 aaPredicted RBP33.77■■■■□ 3
TRIM8-204ENST00000487927 FHOD3Q2V2M9 1422 aa33.77■■■■□ 3
TRIM8-204ENST00000487927 NUP153P49790 1475 aaKnown RBP33.7■■■□□ 2.99
TRIM8-204ENST00000487927 EFCAB5A4FU69 1503 aa33.69■■■□□ 2.98
TRIM8-204ENST00000487927 ABCA9Q8IUA7 1624 aa33.66■■■□□ 2.98
TRIM8-204ENST00000487927 ADGRL1O94910 1474 aa33.56■■■□□ 2.96
TRIM8-204ENST00000487927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.56■■■□□ 2.96
TRIM8-204ENST00000487927 HNRNPUL2Q1KMD3 747 aaKnown RBP33.56■■■□□ 2.96
TRIM8-204ENST00000487927 EHMT2Q96KQ7 1210 aa33.56■■■□□ 2.96
TRIM8-204ENST00000487927 ARAP3Q8WWN8 1544 aa33.53■■■□□ 2.96
TRIM8-204ENST00000487927 UBTFP17480 764 aaKnown RBP33.52■■■□□ 2.96
TRIM8-204ENST00000487927 ARHGAP35Q9NRY4 1499 aa33.44■■■□□ 2.94
TRIM8-204ENST00000487927 PHLDB1Q86UU1 1377 aa33.43■■■□□ 2.94
TRIM8-204ENST00000487927 NEO1Q92859 1461 aa33.42■■■□□ 2.94
TRIM8-204ENST00000487927 PLEKHD1A6NEE1 506 aa33.41■■■□□ 2.94
TRIM8-204ENST00000487927 CDK13Q14004 1512 aaKnown RBP33.41■■■□□ 2.94
TRIM8-204ENST00000487927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.37■■■□□ 2.93
TRIM8-204ENST00000487927 FMN1Q68DA7 1419 aa33.36■■■□□ 2.93
TRIM8-204ENST00000487927 TTC37Q6PGP7 1564 aa33.34■■■□□ 2.93
TRIM8-204ENST00000487927 HECW1Q76N89 1606 aa33.33■■■□□ 2.93
TRIM8-204ENST00000487927 FRMPD1Q5SYB0 1578 aa33.33■■■□□ 2.93
TRIM8-204ENST00000487927 RAPGEF3O95398 923 aa33.3■■■□□ 2.92
TRIM8-204ENST00000487927 CFAP74Q9C0B2 1584 aa33.24■■■□□ 2.91
TRIM8-204ENST00000487927 LRRIQ1Q96JM4 1722 aa33.23■■■□□ 2.91
TRIM8-204ENST00000487927 FANCAO15360 1455 aa33.23■■■□□ 2.91
TRIM8-204ENST00000487927 AKNAQ7Z591 1439 aa33.22■■■□□ 2.91
TRIM8-204ENST00000487927 RICTORQ6R327 1708 aa33.22■■■□□ 2.91
TRIM8-204ENST00000487927 ATP1B4Q9UN42 357 aaPredicted RBP33.21■■■□□ 2.91
TRIM8-204ENST00000487927 DENND4BO75064 1496 aaPredicted RBP33.18■■■□□ 2.9
TRIM8-204ENST00000487927 PLCH2O75038 1416 aa33.12■■■□□ 2.89
TRIM8-204ENST00000487927 KIF14Q15058 1648 aa33.12■■■□□ 2.89
TRIM8-204ENST00000487927 ARHGEF40Q8TER5 1519 aa33.11■■■□□ 2.89
TRIM8-204ENST00000487927 MYO5CQ9NQX4 1742 aa33.1■■■□□ 2.89
TRIM8-204ENST00000487927 ADAMTSL3P82987 1691 aa33.1■■■□□ 2.89
TRIM8-204ENST00000487927 PCF11O94913 1555 aaKnown RBP33.09■■■□□ 2.89
TRIM8-204ENST00000487927 CDK11AQ9UQ88 783 aaPredicted RBP33.08■■■□□ 2.89
TRIM8-204ENST00000487927 TROQ12816 1431 aaPredicted RBP33.07■■■□□ 2.88
TRIM8-204ENST00000487927 ZMYM4Q5VZL5 1548 aa33.07■■■□□ 2.88
TRIM8-204ENST00000487927 BCORL1Q5H9F3 1711 aa33.05■■■□□ 2.88
TRIM8-204ENST00000487927 HECW2Q9P2P5 1572 aa33.05■■■□□ 2.88
TRIM8-204ENST00000487927 CASKIN1Q8WXD9 1431 aa33.05■■■□□ 2.88
TRIM8-204ENST00000487927 SCAPERQ9BY12 1400 aa33■■■□□ 2.87
TRIM8-204ENST00000487927 CLIP1P30622 1438 aa32.99■■■□□ 2.87
TRIM8-204ENST00000487927 POGZQ7Z3K3 1410 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms