RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.96
PRDM2-208ENST00000487453 IQGAP2Q13576 1575 aa21.02■□□□□ 0.95
PRDM2-208ENST00000487453 SHROOM2Q13796 1616 aa21■□□□□ 0.95
PRDM2-208ENST00000487453 GOLGA3Q08378 1498 aa21■□□□□ 0.95
PRDM2-208ENST00000487453 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
PRDM2-208ENST00000487453 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
PRDM2-208ENST00000487453 RIMBP3BA6NNM3 1639 aa20.96■□□□□ 0.95
PRDM2-208ENST00000487453 RIMBP3Q9UFD9 1639 aa20.96■□□□□ 0.95
PRDM2-208ENST00000487453 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
PRDM2-208ENST00000487453 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.94
PRDM2-208ENST00000487453 PRG4Q92954 1404 aaPredicted RBP20.88■□□□□ 0.93
PRDM2-208ENST00000487453 JPH4Q96JJ6 628 aa20.88■□□□□ 0.93
PRDM2-208ENST00000487453 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
PRDM2-208ENST00000487453 UGGT2Q9NYU1 1516 aa20.86■□□□□ 0.93
PRDM2-208ENST00000487453 KIAA0556O60303 1618 aa20.82■□□□□ 0.92
PRDM2-208ENST00000487453 CARMIL2Q6F5E8 1435 aa20.8■□□□□ 0.92
PRDM2-208ENST00000487453 ARAP1Q96P48 1450 aa20.8■□□□□ 0.92
PRDM2-208ENST00000487453 DISP1Q96F81 1524 aa20.78■□□□□ 0.92
PRDM2-208ENST00000487453 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
PRDM2-208ENST00000487453 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
PRDM2-208ENST00000487453 EFCAB5A4FU69 1503 aa20.73■□□□□ 0.91
PRDM2-208ENST00000487453 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.9
PRDM2-208ENST00000487453 TNIKQ9UKE5 1360 aa20.7■□□□□ 0.9
PRDM2-208ENST00000487453 CYB5RLQ6IPT4 315 aa20.68■□□□□ 0.9
PRDM2-208ENST00000487453 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
PRDM2-208ENST00000487453 PTPRGP23470 1445 aa20.65■□□□□ 0.9
PRDM2-208ENST00000487453 P3H3Q8IVL6 736 aa20.65■□□□□ 0.9
PRDM2-208ENST00000487453 FHOD3Q2V2M9 1422 aa20.63■□□□□ 0.89
PRDM2-208ENST00000487453 ARHGAP35Q9NRY4 1499 aa20.62■□□□□ 0.89
PRDM2-208ENST00000487453 CLIP1P30622 1438 aa20.6■□□□□ 0.89
PRDM2-208ENST00000487453 CEP162Q5TB80 1403 aa20.59■□□□□ 0.89
PRDM2-208ENST00000487453 ADCY10Q96PN6 1610 aa20.58■□□□□ 0.89
PRDM2-208ENST00000487453 PLB1Q6P1J6 1458 aa20.54■□□□□ 0.88
PRDM2-208ENST00000487453 UACAQ9BZF9 1416 aa20.53■□□□□ 0.88
PRDM2-208ENST00000487453 ABCC2Q92887 1545 aa20.53■□□□□ 0.88
PRDM2-208ENST00000487453 ABCA8O94911 1581 aa20.53■□□□□ 0.88
PRDM2-208ENST00000487453 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
PRDM2-208ENST00000487453 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
PRDM2-208ENST00000487453 FMN1Q68DA7 1419 aa20.49■□□□□ 0.87
PRDM2-208ENST00000487453 PCF11O94913 1555 aaKnown RBP20.45■□□□□ 0.86
PRDM2-208ENST00000487453 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.86
PRDM2-208ENST00000487453 HECW1Q76N89 1606 aa20.44■□□□□ 0.86
PRDM2-208ENST00000487453 NPM1P06748 294 aaKnown RBP eCLIP20.41■□□□□ 0.86
PRDM2-208ENST00000487453 NUP153P49790 1475 aaKnown RBP20.4■□□□□ 0.86
PRDM2-208ENST00000487453 KDM5BQ9UGL1 1544 aa20.4■□□□□ 0.86
PRDM2-208ENST00000487453 ARID3CA6NKF2 412 aa20.38■□□□□ 0.85
PRDM2-208ENST00000487453 MAPKBP1O60336 1514 aa20.37■□□□□ 0.85
PRDM2-208ENST00000487453 FYCO1Q9BQS8 1478 aa20.37■□□□□ 0.85
PRDM2-208ENST00000487453 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
PRDM2-208ENST00000487453 LRRIQ1Q96JM4 1722 aa20.35■□□□□ 0.85
PRDM2-208ENST00000487453 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
PRDM2-208ENST00000487453 CDK13Q14004 1512 aaKnown RBP20.32■□□□□ 0.84
PRDM2-208ENST00000487453 ATP10BO94823 1461 aa20.31■□□□□ 0.84
PRDM2-208ENST00000487453 VPS8Q8N3P4 1428 aa20.31■□□□□ 0.84
PRDM2-208ENST00000487453 ASXL2Q76L83 1435 aa20.3■□□□□ 0.84
PRDM2-208ENST00000487453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
PRDM2-208ENST00000487453 HNRNPUL2Q1KMD3 747 aaKnown RBP20.3■□□□□ 0.84
PRDM2-208ENST00000487453 EPRSP07814 1512 aaKnown RBP20.3■□□□□ 0.84
PRDM2-208ENST00000487453 CCDC18Q5T9S5 1454 aa20.28■□□□□ 0.84
PRDM2-208ENST00000487453 WDR7Q9Y4E6 1490 aa20.26■□□□□ 0.83
PRDM2-208ENST00000487453 DIP2BQ9P265 1576 aa20.25■□□□□ 0.83
PRDM2-208ENST00000487453 KIF13AQ9H1H9 1805 aa20.23■□□□□ 0.83
PRDM2-208ENST00000487453 CFAP43Q8NDM7 1665 aa20.22■□□□□ 0.83
PRDM2-208ENST00000487453 TRHP20396 242 aaPredicted RBP20.22■□□□□ 0.83
PRDM2-208ENST00000487453 ABCC10Q5T3U5 1492 aa20.21■□□□□ 0.83
PRDM2-208ENST00000487453 TIAM1Q13009 1591 aa20.17■□□□□ 0.82
PRDM2-208ENST00000487453 PLEKHD1A6NEE1 506 aa20.15■□□□□ 0.82
PRDM2-208ENST00000487453 KIF14Q15058 1648 aa20.14■□□□□ 0.81
PRDM2-208ENST00000487453 GLI2P10070 1586 aa20.14■□□□□ 0.81
PRDM2-208ENST00000487453 CDK11AQ9UQ88 783 aaPredicted RBP20.14■□□□□ 0.81
PRDM2-208ENST00000487453 MAGI3Q5TCQ9 1506 aa20.13■□□□□ 0.81
PRDM2-208ENST00000487453 FAM69CQ0P6D2 419 aa20.13■□□□□ 0.81
PRDM2-208ENST00000487453 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
PRDM2-208ENST00000487453 MAP3K4Q9Y6R4 1608 aa20.12■□□□□ 0.81
PRDM2-208ENST00000487453 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
PRDM2-208ENST00000487453 ABCA9Q8IUA7 1624 aa20.1■□□□□ 0.81
PRDM2-208ENST00000487453 EHBP1L1Q8N3D4 1523 aa20.1■□□□□ 0.81
PRDM2-208ENST00000487453 TSPOAP1O95153 1857 aa20.09■□□□□ 0.81
PRDM2-208ENST00000487453 MTUS2Q5JR59 1369 aa20.08■□□□□ 0.81
PRDM2-208ENST00000487453 TTC37Q6PGP7 1564 aa20.08■□□□□ 0.81
PRDM2-208ENST00000487453 MAP3K1Q13233 1512 aa20.07■□□□□ 0.8
PRDM2-208ENST00000487453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.07■□□□□ 0.8
PRDM2-208ENST00000487453 APLP2Q06481 763 aa20.06■□□□□ 0.8
PRDM2-208ENST00000487453 MYO5CQ9NQX4 1742 aa20.03■□□□□ 0.8
PRDM2-208ENST00000487453 PPRC1Q5VV67 1664 aaKnown RBP20.03■□□□□ 0.8
PRDM2-208ENST00000487453 SUPT6HQ7KZ85 1726 aaKnown RBP20.02■□□□□ 0.8
PRDM2-208ENST00000487453 LRRC9Q6ZRR7 1453 aa20.02■□□□□ 0.8
PRDM2-208ENST00000487453 CD109Q6YHK3 1445 aa20.02■□□□□ 0.79
PRDM2-208ENST00000487453 TEX14Q8IWB6 1497 aa19.98■□□□□ 0.79
PRDM2-208ENST00000487453 PREX2Q70Z35 1606 aa19.97■□□□□ 0.79
PRDM2-208ENST00000487453 CDC42BPAQ5VT25 1732 aa19.96■□□□□ 0.79
PRDM2-208ENST00000487453 ITSN2Q9NZM3 1697 aa19.95■□□□□ 0.78
PRDM2-208ENST00000487453 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
PRDM2-208ENST00000487453 KANK4Q5T7N3 995 aaPredicted RBP19.94■□□□□ 0.78
PRDM2-208ENST00000487453 NCOA2Q15596 1464 aa19.93■□□□□ 0.78
PRDM2-208ENST00000487453 ARHGAP5Q13017 1502 aa19.92■□□□□ 0.78
PRDM2-208ENST00000487453 CDC42BPBQ9Y5S2 1711 aa19.92■□□□□ 0.78
PRDM2-208ENST00000487453 CCNB3Q8WWL7 1395 aa19.9■□□□□ 0.78
PRDM2-208ENST00000487453 FANCAO15360 1455 aa19.9■□□□□ 0.78
PRDM2-208ENST00000487453 ARAP3Q8WWN8 1544 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms