RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 FBLN2P98095 1184 aa12.68□□□□□ -0.38
ZNF541-204ENST00000487275 CTTNBP2Q8WZ74 1663 aa12.67□□□□□ -0.38
ZNF541-204ENST00000487275 ARHGAP35Q9NRY4 1499 aa12.64□□□□□ -0.39
ZNF541-204ENST00000487275 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
ZNF541-204ENST00000487275 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
ZNF541-204ENST00000487275 EFCAB5A4FU69 1503 aa12.61□□□□□ -0.39
ZNF541-204ENST00000487275 KIAA0586Q9BVV6 1533 aa12.61□□□□□ -0.39
ZNF541-204ENST00000487275 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
ZNF541-204ENST00000487275 NUP160Q12769 1436 aa12.59□□□□□ -0.39
ZNF541-204ENST00000487275 CEP170Q5SW79 1584 aa12.58□□□□□ -0.4
ZNF541-204ENST00000487275 P3H3Q8IVL6 736 aa12.58□□□□□ -0.4
ZNF541-204ENST00000487275 FHOD3Q2V2M9 1422 aa12.56□□□□□ -0.4
ZNF541-204ENST00000487275 CHD1O14646 1710 aa12.55□□□□□ -0.4
ZNF541-204ENST00000487275 APLP2Q06481 763 aa12.55□□□□□ -0.4
ZNF541-204ENST00000487275 UGGT2Q9NYU1 1516 aa12.55□□□□□ -0.4
ZNF541-204ENST00000487275 SAMD9Q5K651 1589 aa12.55□□□□□ -0.4
ZNF541-204ENST00000487275 JPH4Q96JJ6 628 aa12.51□□□□□ -0.41
ZNF541-204ENST00000487275 FMN1Q68DA7 1419 aa12.51□□□□□ -0.41
ZNF541-204ENST00000487275 PPARGC1BQ86YN6 1023 aaKnown RBP12.49□□□□□ -0.41
ZNF541-204ENST00000487275 CARMIL2Q6F5E8 1435 aa12.48□□□□□ -0.41
ZNF541-204ENST00000487275 KIAA0556O60303 1618 aa12.48□□□□□ -0.41
ZNF541-204ENST00000487275 DISP1Q96F81 1524 aa12.47□□□□□ -0.41
ZNF541-204ENST00000487275 ATP1B4Q9UN42 357 aaPredicted RBP12.46□□□□□ -0.41
ZNF541-204ENST00000487275 CASKIN1Q8WXD9 1431 aa12.45□□□□□ -0.42
ZNF541-204ENST00000487275 PCF11O94913 1555 aaKnown RBP12.45□□□□□ -0.42
ZNF541-204ENST00000487275 FYCO1Q9BQS8 1478 aa12.45□□□□□ -0.42
ZNF541-204ENST00000487275 TTBK1Q5TCY1 1321 aaPredicted RBP12.44□□□□□ -0.42
ZNF541-204ENST00000487275 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
ZNF541-204ENST00000487275 PRG4Q92954 1404 aaPredicted RBP12.43□□□□□ -0.42
ZNF541-204ENST00000487275 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
ZNF541-204ENST00000487275 MAP3K1Q13233 1512 aa12.41□□□□□ -0.42
ZNF541-204ENST00000487275 SHROOM2Q13796 1616 aa12.4□□□□□ -0.42
ZNF541-204ENST00000487275 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
ZNF541-204ENST00000487275 TIAM1Q13009 1591 aa12.39□□□□□ -0.43
ZNF541-204ENST00000487275 PCGF6Q9BYE7 350 aa12.38□□□□□ -0.43
ZNF541-204ENST00000487275 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
ZNF541-204ENST00000487275 KANK4Q5T7N3 995 aaPredicted RBP12.37□□□□□ -0.43
ZNF541-204ENST00000487275 PTPRGP23470 1445 aa12.36□□□□□ -0.43
ZNF541-204ENST00000487275 CFAP43Q8NDM7 1665 aa12.35□□□□□ -0.43
ZNF541-204ENST00000487275 CCDC18Q5T9S5 1454 aa12.35□□□□□ -0.43
ZNF541-204ENST00000487275 RAPGEF6Q8TEU7 1601 aa12.35□□□□□ -0.43
ZNF541-204ENST00000487275 LRRC9Q6ZRR7 1453 aa12.34□□□□□ -0.43
ZNF541-204ENST00000487275 PLB1Q6P1J6 1458 aa12.33□□□□□ -0.44
ZNF541-204ENST00000487275 EPRSP07814 1512 aaKnown RBP12.32□□□□□ -0.44
ZNF541-204ENST00000487275 ERCC6L2Q5T890 1561 aa12.32□□□□□ -0.44
ZNF541-204ENST00000487275 MTUS2Q5JR59 1369 aa12.31□□□□□ -0.44
ZNF541-204ENST00000487275 ARID3CA6NKF2 412 aa12.31□□□□□ -0.44
ZNF541-204ENST00000487275 NUP153P49790 1475 aaKnown RBP12.31□□□□□ -0.44
ZNF541-204ENST00000487275 ABCA8O94911 1581 aa12.3□□□□□ -0.44
ZNF541-204ENST00000487275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
ZNF541-204ENST00000487275 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
ZNF541-204ENST00000487275 LRRIQ1Q96JM4 1722 aa12.29□□□□□ -0.44
ZNF541-204ENST00000487275 CDK13Q14004 1512 aaKnown RBP12.29□□□□□ -0.44
ZNF541-204ENST00000487275 CDK11AQ9UQ88 783 aaPredicted RBP12.28□□□□□ -0.44
ZNF541-204ENST00000487275 UACAQ9BZF9 1416 aa12.28□□□□□ -0.44
ZNF541-204ENST00000487275 EHBP1L1Q8N3D4 1523 aa12.27□□□□□ -0.44
ZNF541-204ENST00000487275 ABCC2Q92887 1545 aa12.23□□□□□ -0.45
ZNF541-204ENST00000487275 MAGI3Q5TCQ9 1506 aa12.22□□□□□ -0.45
ZNF541-204ENST00000487275 ATP10BO94823 1461 aa12.22□□□□□ -0.45
ZNF541-204ENST00000487275 SUPT6HQ7KZ85 1726 aaKnown RBP12.22□□□□□ -0.45
ZNF541-204ENST00000487275 RRBP1Q9P2E9 1410 aaKnown RBP12.21□□□□□ -0.45
ZNF541-204ENST00000487275 PHLDB1Q86UU1 1377 aa12.21□□□□□ -0.45
ZNF541-204ENST00000487275 PLEKHD1A6NEE1 506 aa12.21□□□□□ -0.45
ZNF541-204ENST00000487275 UHRF1BP1LA0JNW5 1464 aa12.21□□□□□ -0.46
ZNF541-204ENST00000487275 NCOA2Q15596 1464 aa12.21□□□□□ -0.46
ZNF541-204ENST00000487275 TROQ12816 1431 aaPredicted RBP12.2□□□□□ -0.46
ZNF541-204ENST00000487275 CCNB3Q8WWL7 1395 aa12.2□□□□□ -0.46
ZNF541-204ENST00000487275 ARHGEF11O15085 1522 aa12.16□□□□□ -0.46
ZNF541-204ENST00000487275 MYOM3Q5VTT5 1437 aa12.16□□□□□ -0.46
ZNF541-204ENST00000487275 FGD6Q6ZV73 1430 aa12.15□□□□□ -0.46
ZNF541-204ENST00000487275 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
ZNF541-204ENST00000487275 KDM5BQ9UGL1 1544 aa12.15□□□□□ -0.46
ZNF541-204ENST00000487275 KIF14Q15058 1648 aa12.13□□□□□ -0.47
ZNF541-204ENST00000487275 ZCCHC11Q5TAX3 1644 aaKnown RBP12.13□□□□□ -0.47
ZNF541-204ENST00000487275 ADCY10Q96PN6 1610 aa12.13□□□□□ -0.47
ZNF541-204ENST00000487275 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
ZNF541-204ENST00000487275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.12□□□□□ -0.47
ZNF541-204ENST00000487275 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
ZNF541-204ENST00000487275 ITGAEP38570 1179 aa12.1□□□□□ -0.47
ZNF541-204ENST00000487275 RIMBP3CA6NJZ7 1639 aa12.09□□□□□ -0.47
ZNF541-204ENST00000487275 RIMBP3BA6NNM3 1639 aa12.09□□□□□ -0.47
ZNF541-204ENST00000487275 RIMBP3Q9UFD9 1639 aa12.09□□□□□ -0.47
ZNF541-204ENST00000487275 PTPN23Q9H3S7 1636 aa12.08□□□□□ -0.48
ZNF541-204ENST00000487275 CYB5RLQ6IPT4 315 aa12.08□□□□□ -0.48
ZNF541-204ENST00000487275 ABCC10Q5T3U5 1492 aa12.08□□□□□ -0.48
ZNF541-204ENST00000487275 GPATCH8Q9UKJ3 1502 aaKnown RBP12.07□□□□□ -0.48
ZNF541-204ENST00000487275 KCNH8Q96L42 1107 aa12.07□□□□□ -0.48
ZNF541-204ENST00000487275 CFDP1Q9UEE9 299 aaPredicted RBP12.07□□□□□ -0.48
ZNF541-204ENST00000487275 TCOF1Q13428 1488 aaKnown RBP12.07□□□□□ -0.48
ZNF541-204ENST00000487275 ITSN2Q9NZM3 1697 aa12.06□□□□□ -0.48
ZNF541-204ENST00000487275 WDR7Q9Y4E6 1490 aa12.06□□□□□ -0.48
ZNF541-204ENST00000487275 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
ZNF541-204ENST00000487275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.03□□□□□ -0.48
ZNF541-204ENST00000487275 ZNF777Q9ULD5 760 aaPredicted RBP12.03□□□□□ -0.48
ZNF541-204ENST00000487275 CDC42BPAQ5VT25 1732 aa12.01□□□□□ -0.49
ZNF541-204ENST00000487275 CAMSAP2Q08AD1 1489 aa12.01□□□□□ -0.49
ZNF541-204ENST00000487275 TTC37Q6PGP7 1564 aa12.01□□□□□ -0.49
ZNF541-204ENST00000487275 ZNF644Q9H582 1327 aaPredicted RBP12□□□□□ -0.49
ZNF541-204ENST00000487275 PREX2Q70Z35 1606 aa12□□□□□ -0.49
ZNF541-204ENST00000487275 ARHGAP5Q13017 1502 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms