RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 ZBTB47Q9UFB7 747 aaPredicted RBP10.47□□□□□ -0.73
COL6A4P1-202ENST00000487147 CCDC136Q96JN2 1154 aa10.46□□□□□ -0.74
COL6A4P1-202ENST00000487147 MRS2Q9HD23 443 aa10.45□□□□□ -0.74
COL6A4P1-202ENST00000487147 PPP4R2Q9NY27 417 aa10.45□□□□□ -0.74
COL6A4P1-202ENST00000487147 DEKP35659 375 aaKnown RBP10.43□□□□□ -0.74
COL6A4P1-202ENST00000487147 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
COL6A4P1-202ENST00000487147 TOP2AP11388 1531 aaKnown RBP10.42□□□□□ -0.74
COL6A4P1-202ENST00000487147 RAB3GAP2Q9H2M9 1393 aa10.41□□□□□ -0.74
COL6A4P1-202ENST00000487147 ZNF326Q5BKZ1 582 aaKnown RBP10.41□□□□□ -0.74
COL6A4P1-202ENST00000487147 NOP58Q9Y2X3 529 aaKnown RBP10.41□□□□□ -0.74
COL6A4P1-202ENST00000487147 B4GALNT3Q6L9W6 998 aa10.41□□□□□ -0.74
COL6A4P1-202ENST00000487147 PHF23Q9BUL5 403 aaPredicted RBP10.41□□□□□ -0.74
COL6A4P1-202ENST00000487147 EIF4G2P78344 907 aaKnown RBP eCLIP10.39□□□□□ -0.75
COL6A4P1-202ENST00000487147 SETD5Q9C0A6 1442 aa10.38□□□□□ -0.75
COL6A4P1-202ENST00000487147 RAPGEF2Q9Y4G8 1499 aa10.38□□□□□ -0.75
COL6A4P1-202ENST00000487147 ERICH6BQ5W0A0 696 aa10.35□□□□□ -0.75
COL6A4P1-202ENST00000487147 FANCIQ9NVI1 1328 aa10.35□□□□□ -0.75
COL6A4P1-202ENST00000487147 BAZ1BQ9UIG0 1483 aaKnown RBP10.35□□□□□ -0.75
COL6A4P1-202ENST00000487147 KIF27Q86VH2 1401 aa10.35□□□□□ -0.75
COL6A4P1-202ENST00000487147 PPP1R15AO75807 674 aaPredicted RBP10.35□□□□□ -0.75
COL6A4P1-202ENST00000487147 CHIC2Q9UKJ5 165 aa10.34□□□□□ -0.75
COL6A4P1-202ENST00000487147 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
COL6A4P1-202ENST00000487147 MTUS2Q5JR59 1369 aa10.32□□□□□ -0.76
COL6A4P1-202ENST00000487147 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
COL6A4P1-202ENST00000487147 SALL2Q9Y467 1007 aaPredicted RBP10.3□□□□□ -0.76
COL6A4P1-202ENST00000487147 SMARCA2P51531 1590 aa10.3□□□□□ -0.76
COL6A4P1-202ENST00000487147 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
COL6A4P1-202ENST00000487147 SENP3-EIF4A1A0A087X0R7 540 aa10.28□□□□□ -0.76
COL6A4P1-202ENST00000487147 KIF21BO75037 1637 aa10.27□□□□□ -0.76
COL6A4P1-202ENST00000487147 ARID3CA6NKF2 412 aa10.26□□□□□ -0.77
COL6A4P1-202ENST00000487147 LAS1LQ9Y4W2 734 aaKnown RBP10.26□□□□□ -0.77
COL6A4P1-202ENST00000487147 NEFMP07197 916 aa10.26□□□□□ -0.77
COL6A4P1-202ENST00000487147 HSPA5P11021 654 aaKnown RBP10.26□□□□□ -0.77
COL6A4P1-202ENST00000487147 SMARCA4P51532 1647 aa10.26□□□□□ -0.77
COL6A4P1-202ENST00000487147 PPM1GO15355 546 aaPredicted RBP10.24□□□□□ -0.77
COL6A4P1-202ENST00000487147 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
COL6A4P1-202ENST00000487147 MSH5O43196 834 aa10.23□□□□□ -0.77
COL6A4P1-202ENST00000487147 IPO9Q96P70 1041 aaKnown RBP10.22□□□□□ -0.77
COL6A4P1-202ENST00000487147 ANO8Q9HCE9 1232 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P1-202ENST00000487147 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.78
COL6A4P1-202ENST00000487147 RRBP1Q9P2E9 1410 aaKnown RBP10.21□□□□□ -0.78
COL6A4P1-202ENST00000487147 PODXL2Q9NZ53 605 aa10.21□□□□□ -0.78
COL6A4P1-202ENST00000487147 ARHGAP35Q9NRY4 1499 aa10.19□□□□□ -0.78
COL6A4P1-202ENST00000487147 SLC4A1APQ9BWU0 796 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-202ENST00000487147 CARMIL1Q5VZK9 1371 aa10.19□□□□□ -0.78
COL6A4P1-202ENST00000487147 GLIPR1L2Q4G1C9 344 aa10.18□□□□□ -0.78
COL6A4P1-202ENST00000487147 CUX2O14529 1486 aa10.16□□□□□ -0.78
COL6A4P1-202ENST00000487147 ZNF777Q9ULD5 760 aaPredicted RBP10.16□□□□□ -0.78
COL6A4P1-202ENST00000487147 ZBED9Q6R2W3 1325 aa10.15□□□□□ -0.78
COL6A4P1-202ENST00000487147 ARAP1Q96P48 1450 aa10.15□□□□□ -0.79
COL6A4P1-202ENST00000487147 PRKRIP1Q9H875 184 aaPredicted RBP10.15□□□□□ -0.79
COL6A4P1-202ENST00000487147 NUDCQ9Y266 331 aa10.15□□□□□ -0.79
COL6A4P1-202ENST00000487147 SYNJ1O43426 1573 aa10.14□□□□□ -0.79
COL6A4P1-202ENST00000487147 CANXP27824 592 aaKnown RBP10.14□□□□□ -0.79
COL6A4P1-202ENST00000487147 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
COL6A4P1-202ENST00000487147 WDR97A6NE52 1622 aa10.13□□□□□ -0.79
COL6A4P1-202ENST00000487147 KDM2AQ9Y2K7 1162 aa10.13□□□□□ -0.79
COL6A4P1-202ENST00000487147 PKNOX2Q96KN3 472 aa10.12□□□□□ -0.79
COL6A4P1-202ENST00000487147 TCERG1O14776 1098 aaKnown RBP10.12□□□□□ -0.79
COL6A4P1-202ENST00000487147 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.11□□□□□ -0.79
COL6A4P1-202ENST00000487147 L3MBTL2Q969R5 705 aa10.11□□□□□ -0.79
COL6A4P1-202ENST00000487147 PHLDB1Q86UU1 1377 aa10.11□□□□□ -0.79
COL6A4P1-202ENST00000487147 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
COL6A4P1-202ENST00000487147 FOXD1Q16676 465 aa10.11□□□□□ -0.79
COL6A4P1-202ENST00000487147 ARXQ96QS3 562 aa10.11□□□□□ -0.79
COL6A4P1-202ENST00000487147 FMN1Q68DA7 1419 aa10.1□□□□□ -0.79
COL6A4P1-202ENST00000487147 UPF2Q9HAU5 1272 aaKnown RBP10.09□□□□□ -0.79
COL6A4P1-202ENST00000487147 USP35Q9P2H5 1018 aa10.09□□□□□ -0.79
COL6A4P1-202ENST00000487147 MPHOSPH9Q99550 1183 aa10.09□□□□□ -0.79
COL6A4P1-202ENST00000487147 WASHC2AQ641Q2 1341 aa10.08□□□□□ -0.8
COL6A4P1-202ENST00000487147 ATAD2BQ9ULI0 1458 aa10.08□□□□□ -0.8
COL6A4P1-202ENST00000487147 ERICH3Q5RHP9 1530 aa10.08□□□□□ -0.8
COL6A4P1-202ENST00000487147 UBE2Q2Q8WVN8 375 aa10.08□□□□□ -0.8
COL6A4P1-202ENST00000487147 CARD11Q9BXL7 1154 aa10.08□□□□□ -0.8
COL6A4P1-202ENST00000487147 CCDC18Q5T9S5 1454 aa10.08□□□□□ -0.8
COL6A4P1-202ENST00000487147 PLEKHG5O94827 1062 aa10.07□□□□□ -0.8
COL6A4P1-202ENST00000487147 EIF4G1Q04637 1599 aaKnown RBP10.07□□□□□ -0.8
COL6A4P1-202ENST00000487147 RCAN3Q9UKA8 241 aa10.07□□□□□ -0.8
COL6A4P1-202ENST00000487147 PRXQ9BXM0 1461 aa10.07□□□□□ -0.8
COL6A4P1-202ENST00000487147 LRRC9Q6ZRR7 1453 aa10.06□□□□□ -0.8
COL6A4P1-202ENST00000487147 FHOD3Q2V2M9 1422 aa10.06□□□□□ -0.8
COL6A4P1-202ENST00000487147 WDR43Q15061 677 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL6A4P1-202ENST00000487147 PDE4AP27815 886 aa10.05□□□□□ -0.8
COL6A4P1-202ENST00000487147 RGS3P49796 1198 aa10.05□□□□□ -0.8
COL6A4P1-202ENST00000487147 BECN1Q14457 450 aa10.04□□□□□ -0.8
COL6A4P1-202ENST00000487147 CNTLNQ9NXG0 1405 aa10.03□□□□□ -0.8
COL6A4P1-202ENST00000487147 CCDC184Q52MB2 194 aa10.03□□□□□ -0.8
COL6A4P1-202ENST00000487147 UACAQ9BZF9 1416 aa10.03□□□□□ -0.8
COL6A4P1-202ENST00000487147 IL27Q8NEV9 243 aa10.02□□□□□ -0.8
COL6A4P1-202ENST00000487147 CCDC7Q96M83 1385 aa10.02□□□□□ -0.81
COL6A4P1-202ENST00000487147 EXOC6Q8TAG9 804 aa10.01□□□□□ -0.81
COL6A4P1-202ENST00000487147 GSE1Q14687 1217 aa10.01□□□□□ -0.81
COL6A4P1-202ENST00000487147 IGF1RP08069 1367 aa10□□□□□ -0.81
COL6A4P1-202ENST00000487147 FGD6Q6ZV73 1430 aa9.99□□□□□ -0.81
COL6A4P1-202ENST00000487147 RRP1P56182 461 aaKnown RBP9.99□□□□□ -0.81
COL6A4P1-202ENST00000487147 MAPKBP1O60336 1514 aa9.99□□□□□ -0.81
COL6A4P1-202ENST00000487147 TSPY4P0CV99 314 aa9.99□□□□□ -0.81
COL6A4P1-202ENST00000487147 TSPY10P0CW01 314 aa9.99□□□□□ -0.81
COL6A4P1-202ENST00000487147 KIF7Q2M1P5 1343 aa9.98□□□□□ -0.81
COL6A4P1-202ENST00000487147 RALBP1Q15311 655 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms