RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 RUSC2Q8N2Y8 1516 aa42.56■■■■■ 4.4
LIME1-206ENST00000487026 CUL7Q14999 1698 aa42.48■■■■■ 4.39
LIME1-206ENST00000487026 CARMIL1Q5VZK9 1371 aa42.42■■■■■ 4.38
LIME1-206ENST00000487026 KIAA0586Q9BVV6 1533 aa42.41■■■■■ 4.38
LIME1-206ENST00000487026 NPM1P06748 294 aaKnown RBP eCLIP42.16■■■■■ 4.34
LIME1-206ENST00000487026 TTBK1Q5TCY1 1321 aaPredicted RBP42.11■■■■■ 4.33
LIME1-206ENST00000487026 ADCY10Q96PN6 1610 aa42.09■■■■■ 4.33
LIME1-206ENST00000487026 KIF13AQ9H1H9 1805 aa42.04■■■■■ 4.32
LIME1-206ENST00000487026 PTPRGP23470 1445 aa42.03■■■■■ 4.32
LIME1-206ENST00000487026 RAPGEF2Q9Y4G8 1499 aa42.02■■■■■ 4.32
LIME1-206ENST00000487026 IQGAP2Q13576 1575 aa42.01■■■■■ 4.32
LIME1-206ENST00000487026 FAM69CQ0P6D2 419 aa41.99■■■■■ 4.31
LIME1-206ENST00000487026 CARMIL2Q6F5E8 1435 aa41.99■■■■■ 4.31
LIME1-206ENST00000487026 TNIKQ9UKE5 1360 aa41.95■■■■■ 4.31
LIME1-206ENST00000487026 MAPKBP1O60336 1514 aa41.94■■■■■ 4.3
LIME1-206ENST00000487026 ABCC10Q5T3U5 1492 aa41.92■■■■■ 4.3
LIME1-206ENST00000487026 DISP1Q96F81 1524 aa41.85■■■■■ 4.29
LIME1-206ENST00000487026 DIP2BQ9P265 1576 aa41.8■■■■■ 4.28
LIME1-206ENST00000487026 UGGT2Q9NYU1 1516 aa41.76■■■■■ 4.28
LIME1-206ENST00000487026 ABCC2Q92887 1545 aa41.72■■■■■ 4.27
LIME1-206ENST00000487026 UACAQ9BZF9 1416 aa41.69■■■■■ 4.26
LIME1-206ENST00000487026 UHRF1BP1LA0JNW5 1464 aa41.65■■■■■ 4.26
LIME1-206ENST00000487026 KIAA0556O60303 1618 aa41.64■■■■■ 4.26
LIME1-206ENST00000487026 PRXQ9BXM0 1461 aa41.64■■■■■ 4.26
LIME1-206ENST00000487026 AEBP2Q6ZN18 517 aaPredicted RBP41.62■■■■■ 4.25
LIME1-206ENST00000487026 ASXL2Q76L83 1435 aa41.6■■■■■ 4.25
LIME1-206ENST00000487026 CTTNBP2Q8WZ74 1663 aa41.59■■■■■ 4.25
LIME1-206ENST00000487026 TSPOAP1O95153 1857 aa41.56■■■■■ 4.24
LIME1-206ENST00000487026 PLB1Q6P1J6 1458 aa41.53■■■■■ 4.24
LIME1-206ENST00000487026 KDM5BQ9UGL1 1544 aa41.48■■■■■ 4.23
LIME1-206ENST00000487026 CSRNP3Q8WYN3 585 aa41.47■■■■■ 4.23
LIME1-206ENST00000487026 GOLGA3Q08378 1498 aa41.45■■■■■ 4.23
LIME1-206ENST00000487026 KDM6BO15054 1643 aa41.39■■■■■ 4.22
LIME1-206ENST00000487026 ZCCHC11Q5TAX3 1644 aaKnown RBP41.39■■■■■ 4.22
LIME1-206ENST00000487026 GLI2P10070 1586 aa41.37■■■■■ 4.21
LIME1-206ENST00000487026 EPRSP07814 1512 aaKnown RBP41.33■■■■■ 4.21
LIME1-206ENST00000487026 P3H3Q8IVL6 736 aa41.32■■■■■ 4.21
LIME1-206ENST00000487026 PPRC1Q5VV67 1664 aaKnown RBP41.26■■■■■ 4.2
LIME1-206ENST00000487026 FAM9AQ8IZU1 332 aaPredicted RBP41.26■■■■■ 4.2
LIME1-206ENST00000487026 ABCA8O94911 1581 aa41.25■■■■■ 4.19
LIME1-206ENST00000487026 EEA1Q15075 1411 aa41.19■■■■■ 4.18
LIME1-206ENST00000487026 WDR7Q9Y4E6 1490 aa41.19■■■■■ 4.18
LIME1-206ENST00000487026 MAP3K4Q9Y6R4 1608 aa41.15■■■■■ 4.18
LIME1-206ENST00000487026 KCNH8Q96L42 1107 aa41.14■■■■■ 4.18
LIME1-206ENST00000487026 ARID3CA6NKF2 412 aa41.13■■■■■ 4.17
LIME1-206ENST00000487026 RANGAP1P46060 587 aaPredicted RBP41.12■■■■■ 4.17
LIME1-206ENST00000487026 COL17A1Q9UMD9 1497 aaPredicted RBP41.05■■■■■ 4.16
LIME1-206ENST00000487026 SAMD9Q5K651 1589 aa41.04■■■■■ 4.16
LIME1-206ENST00000487026 TEX14Q8IWB6 1497 aa41.02■■■■■ 4.16
LIME1-206ENST00000487026 KDM4FA0A1W2PPD8 638 aa40.99■■■■■ 4.15
LIME1-206ENST00000487026 ATP10BO94823 1461 aa40.97■■■■■ 4.15
LIME1-206ENST00000487026 CD109Q6YHK3 1445 aa40.96■■■■■ 4.15
LIME1-206ENST00000487026 CHIC1Q5VXU3 224 aa40.95■■■■■ 4.15
LIME1-206ENST00000487026 EHMT2Q96KQ7 1210 aa40.89■■■■■ 4.14
LIME1-206ENST00000487026 CFAP43Q8NDM7 1665 aa40.88■■■■■ 4.13
LIME1-206ENST00000487026 FHOD3Q2V2M9 1422 aa40.87■■■■■ 4.13
LIME1-206ENST00000487026 KIF21BO75037 1637 aa40.85■■■■■ 4.13
LIME1-206ENST00000487026 RAPGEF6Q8TEU7 1601 aa40.85■■■■■ 4.13
LIME1-206ENST00000487026 MAGI3Q5TCQ9 1506 aa40.85■■■■■ 4.13
LIME1-206ENST00000487026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.84■■■■■ 4.13
LIME1-206ENST00000487026 HNRNPUL2Q1KMD3 747 aaKnown RBP40.84■■■■■ 4.13
LIME1-206ENST00000487026 NUP153P49790 1475 aaKnown RBP40.74■■■■■ 4.11
LIME1-206ENST00000487026 UBTFP17480 764 aaKnown RBP40.72■■■■■ 4.11
LIME1-206ENST00000487026 EFCAB5A4FU69 1503 aa40.65■■■■■ 4.1
LIME1-206ENST00000487026 ADGRL1O94910 1474 aa40.64■■■■■ 4.1
LIME1-206ENST00000487026 ABCA9Q8IUA7 1624 aa40.63■■■■■ 4.09
LIME1-206ENST00000487026 PLEKHD1A6NEE1 506 aa40.56■■■■■ 4.08
LIME1-206ENST00000487026 ARAP3Q8WWN8 1544 aa40.53■■■■■ 4.08
LIME1-206ENST00000487026 PHLDB1Q86UU1 1377 aa40.46■■■■■ 4.07
LIME1-206ENST00000487026 RAPGEF3O95398 923 aa40.44■■■■■ 4.06
LIME1-206ENST00000487026 ATP1B4Q9UN42 357 aaPredicted RBP40.44■■■■■ 4.06
LIME1-206ENST00000487026 ARHGAP35Q9NRY4 1499 aa40.42■■■■■ 4.06
LIME1-206ENST00000487026 NEO1Q92859 1461 aa40.4■■■■■ 4.06
LIME1-206ENST00000487026 CDK13Q14004 1512 aaKnown RBP40.4■■■■■ 4.06
LIME1-206ENST00000487026 FMN1Q68DA7 1419 aa40.33■■■■■ 4.05
LIME1-206ENST00000487026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.32■■■■■ 4.05
LIME1-206ENST00000487026 TTC37Q6PGP7 1564 aa40.25■■■■■ 4.03
LIME1-206ENST00000487026 AKNAQ7Z591 1439 aa40.23■■■■■ 4.03
LIME1-206ENST00000487026 HECW1Q76N89 1606 aa40.23■■■■■ 4.03
LIME1-206ENST00000487026 FRMPD1Q5SYB0 1578 aa40.22■■■■■ 4.03
LIME1-206ENST00000487026 FANCAO15360 1455 aa40.21■■■■■ 4.03
LIME1-206ENST00000487026 DENND4BO75064 1496 aaPredicted RBP40.17■■■■■ 4.02
LIME1-206ENST00000487026 CDK11AQ9UQ88 783 aaPredicted RBP40.14■■■■■ 4.02
LIME1-206ENST00000487026 CFAP74Q9C0B2 1584 aa40.1■■■■■ 4.01
LIME1-206ENST00000487026 PLCH2O75038 1416 aa40.08■■■■■ 4.01
LIME1-206ENST00000487026 ARID4BQ4LE39 1312 aaPredicted RBP40.07■■■■■ 4
LIME1-206ENST00000487026 RICTORQ6R327 1708 aa40.07■■■■■ 4
LIME1-206ENST00000487026 LRRIQ1Q96JM4 1722 aa40.02■■■■■ 4
LIME1-206ENST00000487026 KIF14Q15058 1648 aa40■■■■□ 3.99
LIME1-206ENST00000487026 TROQ12816 1431 aaPredicted RBP39.99■■■■□ 3.99
LIME1-206ENST00000487026 HECW2Q9P2P5 1572 aa39.99■■■■□ 3.99
LIME1-206ENST00000487026 SCAPERQ9BY12 1400 aa39.99■■■■□ 3.99
LIME1-206ENST00000487026 EFCAB2Q5VUJ9 269 aa39.97■■■■□ 3.99
LIME1-206ENST00000487026 ADAMTSL3P82987 1691 aa39.96■■■■□ 3.99
LIME1-206ENST00000487026 ARHGEF40Q8TER5 1519 aa39.96■■■■□ 3.99
LIME1-206ENST00000487026 CASKIN1Q8WXD9 1431 aa39.95■■■■□ 3.99
LIME1-206ENST00000487026 PCF11O94913 1555 aaKnown RBP39.93■■■■□ 3.98
LIME1-206ENST00000487026 MYO5CQ9NQX4 1742 aa39.93■■■■□ 3.98
LIME1-206ENST00000487026 CLIP1P30622 1438 aa39.92■■■■□ 3.98
LIME1-206ENST00000487026 YEATS2Q9ULM3 1422 aa39.91■■■■□ 3.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms