RNA–Protein interactions for RNA: ENST00000486911.2

C9orf85-206, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5 BASIC

Gene C9orf85, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-206ENST00000486911 WDR97A6NE52 1622 aa14.27□□□□□ -0.13
C9orf85-206ENST00000486911 RRBP1Q9P2E9 1410 aaKnown RBP14.27□□□□□ -0.13
C9orf85-206ENST00000486911 PAK3O75914 559 aaPredicted RBP14.26□□□□□ -0.13
C9orf85-206ENST00000486911 PPP4R2Q9NY27 417 aa14.25□□□□□ -0.13
C9orf85-206ENST00000486911 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
C9orf85-206ENST00000486911 CCDC136Q96JN2 1154 aa14.24□□□□□ -0.13
C9orf85-206ENST00000486911 MAPKBP1O60336 1514 aa14.23□□□□□ -0.13
C9orf85-206ENST00000486911 CUX2O14529 1486 aa14.22□□□□□ -0.13
C9orf85-206ENST00000486911 RTN4Q9NQC3 1192 aaKnown RBP14.21□□□□□ -0.13
C9orf85-206ENST00000486911 SYNJ1O43426 1573 aa14.2□□□□□ -0.14
C9orf85-206ENST00000486911 RTL5Q5HYW3 569 aaPredicted RBP14.2□□□□□ -0.14
C9orf85-206ENST00000486911 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
C9orf85-206ENST00000486911 IL27Q8NEV9 243 aa14.18□□□□□ -0.14
C9orf85-206ENST00000486911 SMARCA4P51532 1647 aa14.17□□□□□ -0.14
C9orf85-206ENST00000486911 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
C9orf85-206ENST00000486911 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
C9orf85-206ENST00000486911 SETD5Q9C0A6 1442 aa14.16□□□□□ -0.14
C9orf85-206ENST00000486911 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.14□□□□□ -0.15
C9orf85-206ENST00000486911 TIMELESSQ9UNS1 1208 aa14.12□□□□□ -0.15
C9orf85-206ENST00000486911 ANP32AP39687 249 aaKnown RBP14.1□□□□□ -0.15
C9orf85-206ENST00000486911 ZBTB47Q9UFB7 747 aaPredicted RBP14.09□□□□□ -0.15
C9orf85-206ENST00000486911 FAM9BQ8IZU0 186 aa14.08□□□□□ -0.16
C9orf85-206ENST00000486911 IPO9Q96P70 1041 aaKnown RBP14.07□□□□□ -0.16
C9orf85-206ENST00000486911 TONSLQ96HA7 1378 aa14.07□□□□□ -0.16
C9orf85-206ENST00000486911 CCDC184Q52MB2 194 aa14.06□□□□□ -0.16
C9orf85-206ENST00000486911 DAXXQ9UER7 740 aaPredicted RBP14.04□□□□□ -0.16
C9orf85-206ENST00000486911 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
C9orf85-206ENST00000486911 ATP1B4Q9UN42 357 aaPredicted RBP14□□□□□ -0.17
C9orf85-206ENST00000486911 NPM2Q86SE8 214 aaKnown RBP14□□□□□ -0.17
C9orf85-206ENST00000486911 MRS2Q9HD23 443 aa13.99□□□□□ -0.17
C9orf85-206ENST00000486911 LAS1LQ9Y4W2 734 aaKnown RBP13.99□□□□□ -0.17
C9orf85-206ENST00000486911 PHLDB1Q86UU1 1377 aa13.99□□□□□ -0.17
C9orf85-206ENST00000486911 ARHGAP35Q9NRY4 1499 aa13.97□□□□□ -0.17
C9orf85-206ENST00000486911 ERICH3Q5RHP9 1530 aa13.97□□□□□ -0.17
C9orf85-206ENST00000486911 WASHC2AQ641Q2 1341 aa13.96□□□□□ -0.17
C9orf85-206ENST00000486911 NEFMP07197 916 aa13.96□□□□□ -0.17
C9orf85-206ENST00000486911 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
C9orf85-206ENST00000486911 HSPA5P11021 654 aaKnown RBP13.95□□□□□ -0.18
C9orf85-206ENST00000486911 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
C9orf85-206ENST00000486911 UBE2Q2Q8WVN8 375 aa13.95□□□□□ -0.18
C9orf85-206ENST00000486911 ZBED9Q6R2W3 1325 aa13.94□□□□□ -0.18
C9orf85-206ENST00000486911 SENP3-EIF4A1A0A087X0R7 540 aa13.93□□□□□ -0.18
C9orf85-206ENST00000486911 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
C9orf85-206ENST00000486911 PRKRIP1Q9H875 184 aaPredicted RBP13.9□□□□□ -0.18
C9orf85-206ENST00000486911 AKNAQ7Z591 1439 aa13.9□□□□□ -0.19
C9orf85-206ENST00000486911 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
C9orf85-206ENST00000486911 BRPF3Q9ULD4 1205 aa13.89□□□□□ -0.19
C9orf85-206ENST00000486911 LRRC9Q6ZRR7 1453 aa13.88□□□□□ -0.19
C9orf85-206ENST00000486911 TOP2BQ02880 1626 aa13.87□□□□□ -0.19
C9orf85-206ENST00000486911 EIF4G2P78344 907 aaKnown RBP eCLIP13.87□□□□□ -0.19
C9orf85-206ENST00000486911 FHAD1B1AJZ9 1412 aa13.86□□□□□ -0.19
C9orf85-206ENST00000486911 TIAM1Q13009 1591 aa13.86□□□□□ -0.19
C9orf85-206ENST00000486911 KIF27Q86VH2 1401 aa13.85□□□□□ -0.19
C9orf85-206ENST00000486911 C11orf95C9JLR9 678 aaPredicted RBP13.84□□□□□ -0.19
C9orf85-206ENST00000486911 USP35Q9P2H5 1018 aa13.84□□□□□ -0.19
C9orf85-206ENST00000486911 CNTLNQ9NXG0 1405 aa13.83□□□□□ -0.2
C9orf85-206ENST00000486911 NUDCQ9Y266 331 aa13.82□□□□□ -0.2
C9orf85-206ENST00000486911 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
C9orf85-206ENST00000486911 PPM1GO15355 546 aaPredicted RBP13.8□□□□□ -0.2
C9orf85-206ENST00000486911 PDE4AP27815 886 aa13.79□□□□□ -0.2
C9orf85-206ENST00000486911 CCDC18Q5T9S5 1454 aa13.79□□□□□ -0.2
C9orf85-206ENST00000486911 SMG6Q86US8 1419 aaKnown RBP13.79□□□□□ -0.2
C9orf85-206ENST00000486911 MAP3K1Q13233 1512 aa13.77□□□□□ -0.2
C9orf85-206ENST00000486911 CCDC7Q96M83 1385 aa13.77□□□□□ -0.21
C9orf85-206ENST00000486911 GSE1Q14687 1217 aa13.77□□□□□ -0.21
C9orf85-206ENST00000486911 UACAQ9BZF9 1416 aa13.77□□□□□ -0.21
C9orf85-206ENST00000486911 POLR3GLQ9BT43 218 aa13.76□□□□□ -0.21
C9orf85-206ENST00000486911 RNF123Q5XPI4 1314 aa13.76□□□□□ -0.21
C9orf85-206ENST00000486911 TCERG1O14776 1098 aaKnown RBP13.75□□□□□ -0.21
C9orf85-206ENST00000486911 ATAD2BQ9ULI0 1458 aa13.74□□□□□ -0.21
C9orf85-206ENST00000486911 NCOA2Q15596 1464 aa13.74□□□□□ -0.21
C9orf85-206ENST00000486911 EXOC6Q8TAG9 804 aa13.73□□□□□ -0.21
C9orf85-206ENST00000486911 AQRO60306 1485 aaKnown RBP eCLIP13.73□□□□□ -0.21
C9orf85-206ENST00000486911 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
C9orf85-206ENST00000486911 BACH2Q9BYV9 841 aa13.72□□□□□ -0.21
C9orf85-206ENST00000486911 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
C9orf85-206ENST00000486911 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
C9orf85-206ENST00000486911 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
C9orf85-206ENST00000486911 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
C9orf85-206ENST00000486911 KDM5BQ9UGL1 1544 aa13.72□□□□□ -0.21
C9orf85-206ENST00000486911 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.21
C9orf85-206ENST00000486911 SLC4A3P48751 1232 aa13.71□□□□□ -0.21
C9orf85-206ENST00000486911 RRP7BPQ9NSQ0 103 aa13.71□□□□□ -0.21
C9orf85-206ENST00000486911 PTPRKQ15262 1439 aa13.71□□□□□ -0.22
C9orf85-206ENST00000486911 NFKBIBQ15653 356 aa13.7□□□□□ -0.22
C9orf85-206ENST00000486911 KIF7Q2M1P5 1343 aa13.7□□□□□ -0.22
C9orf85-206ENST00000486911 CHIC2Q9UKJ5 165 aa13.69□□□□□ -0.22
C9orf85-206ENST00000486911 NCOA1Q15788 1441 aa13.69□□□□□ -0.22
C9orf85-206ENST00000486911 CUX1P39880 1505 aa13.69□□□□□ -0.22
C9orf85-206ENST00000486911 HFM1A2PYH4 1435 aa13.69□□□□□ -0.22
C9orf85-206ENST00000486911 IGF1RP08069 1367 aa13.68□□□□□ -0.22
C9orf85-206ENST00000486911 FOXD1Q16676 465 aa13.68□□□□□ -0.22
C9orf85-206ENST00000486911 FGD6Q6ZV73 1430 aa13.68□□□□□ -0.22
C9orf85-206ENST00000486911 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.68□□□□□ -0.22
C9orf85-206ENST00000486911 SKAP1Q86WV1 359 aa13.67□□□□□ -0.22
C9orf85-206ENST00000486911 CARMIL1Q5VZK9 1371 aa13.66□□□□□ -0.22
C9orf85-206ENST00000486911 NAIPQ13075 1403 aa13.66□□□□□ -0.22
C9orf85-206ENST00000486911 RRP1P56182 461 aaKnown RBP13.66□□□□□ -0.22
C9orf85-206ENST00000486911 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
C9orf85-206ENST00000486911 FHOD3Q2V2M9 1422 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms