RNA–Protein interactions for RNA: ENST00000486829.1

ARHGEF3-211, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-211ENST00000486829 NUP160Q12769 1436 aa18.9■□□□□ 0.62
ARHGEF3-211ENST00000486829 FAM9AQ8IZU1 332 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF3-211ENST00000486829 PRXQ9BXM0 1461 aa18.87■□□□□ 0.61
ARHGEF3-211ENST00000486829 RAPGEF2Q9Y4G8 1499 aa18.85■□□□□ 0.61
ARHGEF3-211ENST00000486829 KIF21BO75037 1637 aa18.82■□□□□ 0.6
ARHGEF3-211ENST00000486829 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
ARHGEF3-211ENST00000486829 ERCC6L2Q5T890 1561 aa18.8■□□□□ 0.6
ARHGEF3-211ENST00000486829 GOLGA3Q08378 1498 aa18.74■□□□□ 0.59
ARHGEF3-211ENST00000486829 JPH4Q96JJ6 628 aa18.69■□□□□ 0.58
ARHGEF3-211ENST00000486829 PRG4Q92954 1404 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF3-211ENST00000486829 KIAA0586Q9BVV6 1533 aa18.68■□□□□ 0.58
ARHGEF3-211ENST00000486829 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
ARHGEF3-211ENST00000486829 IQGAP2Q13576 1575 aa18.63■□□□□ 0.57
ARHGEF3-211ENST00000486829 UBTFP17480 764 aaKnown RBP18.61■□□□□ 0.57
ARHGEF3-211ENST00000486829 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF3-211ENST00000486829 TNIKQ9UKE5 1360 aa18.55■□□□□ 0.56
ARHGEF3-211ENST00000486829 EHMT2Q96KQ7 1210 aa18.54■□□□□ 0.56
ARHGEF3-211ENST00000486829 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
ARHGEF3-211ENST00000486829 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
ARHGEF3-211ENST00000486829 LOC105371045A0A1W2PR82 267 aa18.47■□□□□ 0.55
ARHGEF3-211ENST00000486829 EFCAB5A4FU69 1503 aa18.47■□□□□ 0.55
ARHGEF3-211ENST00000486829 ADCY10Q96PN6 1610 aa18.45■□□□□ 0.54
ARHGEF3-211ENST00000486829 DISP1Q96F81 1524 aa18.44■□□□□ 0.54
ARHGEF3-211ENST00000486829 SAMD9Q5K651 1589 aa18.44■□□□□ 0.54
ARHGEF3-211ENST00000486829 KIAA0556O60303 1618 aa18.44■□□□□ 0.54
ARHGEF3-211ENST00000486829 TTBK1Q5TCY1 1321 aaPredicted RBP18.43■□□□□ 0.54
ARHGEF3-211ENST00000486829 PTPRGP23470 1445 aa18.42■□□□□ 0.54
ARHGEF3-211ENST00000486829 CLIP1P30622 1438 aa18.4■□□□□ 0.54
ARHGEF3-211ENST00000486829 CEP162Q5TB80 1403 aa18.39■□□□□ 0.53
ARHGEF3-211ENST00000486829 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
ARHGEF3-211ENST00000486829 KIF13AQ9H1H9 1805 aa18.37■□□□□ 0.53
ARHGEF3-211ENST00000486829 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF3-211ENST00000486829 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
ARHGEF3-211ENST00000486829 AEBP2Q6ZN18 517 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF3-211ENST00000486829 MAPKBP1O60336 1514 aa18.34■□□□□ 0.53
ARHGEF3-211ENST00000486829 FHOD3Q2V2M9 1422 aa18.31■□□□□ 0.52
ARHGEF3-211ENST00000486829 UACAQ9BZF9 1416 aa18.31■□□□□ 0.52
ARHGEF3-211ENST00000486829 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
ARHGEF3-211ENST00000486829 ABCC2Q92887 1545 aa18.29■□□□□ 0.52
ARHGEF3-211ENST00000486829 ABCC10Q5T3U5 1492 aa18.28■□□□□ 0.52
ARHGEF3-211ENST00000486829 P3H3Q8IVL6 736 aa18.28■□□□□ 0.52
ARHGEF3-211ENST00000486829 FMN1Q68DA7 1419 aa18.28■□□□□ 0.52
ARHGEF3-211ENST00000486829 DIP2BQ9P265 1576 aa18.27■□□□□ 0.52
ARHGEF3-211ENST00000486829 FAM69CQ0P6D2 419 aa18.24■□□□□ 0.51
ARHGEF3-211ENST00000486829 PLB1Q6P1J6 1458 aa18.22■□□□□ 0.51
ARHGEF3-211ENST00000486829 ZCCHC11Q5TAX3 1644 aaKnown RBP18.22■□□□□ 0.51
ARHGEF3-211ENST00000486829 KDM5BQ9UGL1 1544 aa18.22■□□□□ 0.51
ARHGEF3-211ENST00000486829 ABCA8O94911 1581 aa18.21■□□□□ 0.51
ARHGEF3-211ENST00000486829 ASXL2Q76L83 1435 aa18.2■□□□□ 0.5
ARHGEF3-211ENST00000486829 RAPGEF6Q8TEU7 1601 aa18.18■□□□□ 0.5
ARHGEF3-211ENST00000486829 TSPOAP1O95153 1857 aa18.17■□□□□ 0.5
ARHGEF3-211ENST00000486829 VPS8Q8N3P4 1428 aa18.16■□□□□ 0.5
ARHGEF3-211ENST00000486829 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
ARHGEF3-211ENST00000486829 FYCO1Q9BQS8 1478 aa18.15■□□□□ 0.5
ARHGEF3-211ENST00000486829 HECW1Q76N89 1606 aa18.15■□□□□ 0.5
ARHGEF3-211ENST00000486829 PCF11O94913 1555 aaKnown RBP18.13■□□□□ 0.49
ARHGEF3-211ENST00000486829 GLI2P10070 1586 aa18.12■□□□□ 0.49
ARHGEF3-211ENST00000486829 NUP153P49790 1475 aaKnown RBP18.11■□□□□ 0.49
ARHGEF3-211ENST00000486829 EPRSP07814 1512 aaKnown RBP18.1■□□□□ 0.49
ARHGEF3-211ENST00000486829 PPRC1Q5VV67 1664 aaKnown RBP18.08■□□□□ 0.48
ARHGEF3-211ENST00000486829 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
ARHGEF3-211ENST00000486829 WDR7Q9Y4E6 1490 aa18.07■□□□□ 0.48
ARHGEF3-211ENST00000486829 MAP3K4Q9Y6R4 1608 aa18.05■□□□□ 0.48
ARHGEF3-211ENST00000486829 ARID3CA6NKF2 412 aa18.05■□□□□ 0.48
ARHGEF3-211ENST00000486829 ATP10BO94823 1461 aa18.05■□□□□ 0.48
ARHGEF3-211ENST00000486829 ATP1B4Q9UN42 357 aaPredicted RBP18.04■□□□□ 0.48
ARHGEF3-211ENST00000486829 KDM6BO15054 1643 aa18.02■□□□□ 0.48
ARHGEF3-211ENST00000486829 MAP3K1Q13233 1512 aa17.99■□□□□ 0.47
ARHGEF3-211ENST00000486829 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
ARHGEF3-211ENST00000486829 KCNH8Q96L42 1107 aa17.99■□□□□ 0.47
ARHGEF3-211ENST00000486829 CDK11AQ9UQ88 783 aaPredicted RBP17.99■□□□□ 0.47
ARHGEF3-211ENST00000486829 CDK13Q14004 1512 aaKnown RBP17.98■□□□□ 0.47
ARHGEF3-211ENST00000486829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
ARHGEF3-211ENST00000486829 HNRNPUL2Q1KMD3 747 aaKnown RBP17.98■□□□□ 0.47
ARHGEF3-211ENST00000486829 CFAP43Q8NDM7 1665 aa17.98■□□□□ 0.47
ARHGEF3-211ENST00000486829 APLP2Q06481 763 aa17.97■□□□□ 0.47
ARHGEF3-211ENST00000486829 TIAM1Q13009 1591 aa17.96■□□□□ 0.46
ARHGEF3-211ENST00000486829 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
ARHGEF3-211ENST00000486829 TEX14Q8IWB6 1497 aa17.94■□□□□ 0.46
ARHGEF3-211ENST00000486829 CD109Q6YHK3 1445 aa17.92■□□□□ 0.46
ARHGEF3-211ENST00000486829 MAGI3Q5TCQ9 1506 aa17.9■□□□□ 0.46
ARHGEF3-211ENST00000486829 ABCA9Q8IUA7 1624 aa17.9■□□□□ 0.46
ARHGEF3-211ENST00000486829 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.46
ARHGEF3-211ENST00000486829 COL17A1Q9UMD9 1497 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF3-211ENST00000486829 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
ARHGEF3-211ENST00000486829 MTUS2Q5JR59 1369 aa17.89■□□□□ 0.45
ARHGEF3-211ENST00000486829 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
ARHGEF3-211ENST00000486829 KIF14Q15058 1648 aa17.85■□□□□ 0.45
ARHGEF3-211ENST00000486829 SUPT6HQ7KZ85 1726 aaKnown RBP17.8■□□□□ 0.44
ARHGEF3-211ENST00000486829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.78■□□□□ 0.442e-6■■■■■ 51.7
ARHGEF3-211ENST00000486829 KANK4Q5T7N3 995 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF3-211ENST00000486829 TTC37Q6PGP7 1564 aa17.77■□□□□ 0.44
ARHGEF3-211ENST00000486829 NCOA2Q15596 1464 aa17.75■□□□□ 0.43
ARHGEF3-211ENST00000486829 ARAP3Q8WWN8 1544 aa17.75■□□□□ 0.43
ARHGEF3-211ENST00000486829 NEO1Q92859 1461 aa17.73■□□□□ 0.43
ARHGEF3-211ENST00000486829 PHLDB1Q86UU1 1377 aa17.72■□□□□ 0.43
ARHGEF3-211ENST00000486829 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
ARHGEF3-211ENST00000486829 CCNB3Q8WWL7 1395 aa17.71■□□□□ 0.43
ARHGEF3-211ENST00000486829 ITSN2Q9NZM3 1697 aa17.71■□□□□ 0.42
ARHGEF3-211ENST00000486829 PLCH2O75038 1416 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms