RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 RAPGEF2Q9Y4G8 1499 aa30.67■■■□□ 2.5
COL1A1-207ENST00000486572 ERCC6L2Q5T890 1561 aa30.65■■■□□ 2.5
COL1A1-207ENST00000486572 CHIC1Q5VXU3 224 aa30.62■■■□□ 2.49
COL1A1-207ENST00000486572 JPH4Q96JJ6 628 aa30.61■■■□□ 2.49
COL1A1-207ENST00000486572 PRG4Q92954 1404 aaPredicted RBP30.59■■■□□ 2.49
COL1A1-207ENST00000486572 PRXQ9BXM0 1461 aa30.56■■■□□ 2.48
COL1A1-207ENST00000486572 EEA1Q15075 1411 aa30.56■■■□□ 2.48
COL1A1-207ENST00000486572 IQGAP2Q13576 1575 aa30.52■■■□□ 2.48
COL1A1-207ENST00000486572 CSRNP3Q8WYN3 585 aa30.48■■■□□ 2.47
COL1A1-207ENST00000486572 CTTNBP2Q8WZ74 1663 aa30.41■■■□□ 2.46
COL1A1-207ENST00000486572 FAM9AQ8IZU1 332 aaPredicted RBP30.35■■■□□ 2.45
COL1A1-207ENST00000486572 CARMIL2Q6F5E8 1435 aa30.35■■■□□ 2.45
COL1A1-207ENST00000486572 UGGT2Q9NYU1 1516 aa30.34■■■□□ 2.45
COL1A1-207ENST00000486572 DISP1Q96F81 1524 aa30.28■■■□□ 2.44
COL1A1-207ENST00000486572 KIF21BO75037 1637 aa30.25■■■□□ 2.43
COL1A1-207ENST00000486572 TNIKQ9UKE5 1360 aa30.24■■■□□ 2.43
COL1A1-207ENST00000486572 KIAA0556O60303 1618 aa30.23■■■□□ 2.43
COL1A1-207ENST00000486572 PTPRGP23470 1445 aa30.22■■■□□ 2.43
COL1A1-207ENST00000486572 GOLGA3Q08378 1498 aa30.17■■■□□ 2.42
COL1A1-207ENST00000486572 ADCY10Q96PN6 1610 aa30.15■■■□□ 2.42
COL1A1-207ENST00000486572 TTBK1Q5TCY1 1321 aaPredicted RBP30.13■■■□□ 2.41
COL1A1-207ENST00000486572 TRHP20396 242 aaPredicted RBP30.1■■■□□ 2.41
COL1A1-207ENST00000486572 NPM1P06748 294 aaKnown RBP eCLIP30.03■■■□□ 2.4
COL1A1-207ENST00000486572 UACAQ9BZF9 1416 aa30.03■■■□□ 2.4
COL1A1-207ENST00000486572 SAMD9Q5K651 1589 aa30.02■■■□□ 2.4
COL1A1-207ENST00000486572 UHRF1BP1LA0JNW5 1464 aa30.01■■■□□ 2.4
COL1A1-207ENST00000486572 ABCC2Q92887 1545 aa30■■■□□ 2.39
COL1A1-207ENST00000486572 MAPKBP1O60336 1514 aa29.98■■■□□ 2.39
COL1A1-207ENST00000486572 EHMT2Q96KQ7 1210 aa29.96■■■□□ 2.39
COL1A1-207ENST00000486572 UBTFP17480 764 aaKnown RBP29.94■■■□□ 2.38
COL1A1-207ENST00000486572 PLB1Q6P1J6 1458 aa29.91■■■□□ 2.38
COL1A1-207ENST00000486572 P3H3Q8IVL6 736 aa29.9■■■□□ 2.38
COL1A1-207ENST00000486572 RANGAP1P46060 587 aaPredicted RBP29.89■■■□□ 2.38
COL1A1-207ENST00000486572 EFCAB5A4FU69 1503 aa29.89■■■□□ 2.38
COL1A1-207ENST00000486572 ABCA8O94911 1581 aa29.89■■■□□ 2.38
COL1A1-207ENST00000486572 KDM5BQ9UGL1 1544 aa29.86■■■□□ 2.37
COL1A1-207ENST00000486572 KIF13AQ9H1H9 1805 aa29.83■■■□□ 2.37
COL1A1-207ENST00000486572 ABCC10Q5T3U5 1492 aa29.83■■■□□ 2.37
COL1A1-207ENST00000486572 ZCCHC11Q5TAX3 1644 aaKnown RBP29.82■■■□□ 2.36
COL1A1-207ENST00000486572 FHOD3Q2V2M9 1422 aa29.81■■■□□ 2.36
COL1A1-207ENST00000486572 DIP2BQ9P265 1576 aa29.8■■■□□ 2.36
COL1A1-207ENST00000486572 ASXL2Q76L83 1435 aa29.78■■■□□ 2.36
COL1A1-207ENST00000486572 FAM69CQ0P6D2 419 aa29.73■■■□□ 2.35
COL1A1-207ENST00000486572 RAPGEF6Q8TEU7 1601 aa29.73■■■□□ 2.35
COL1A1-207ENST00000486572 ARHGAP35Q9NRY4 1499 aa29.69■■■□□ 2.34
COL1A1-207ENST00000486572 WDR7Q9Y4E6 1490 aa29.64■■■□□ 2.34
COL1A1-207ENST00000486572 GLI2P10070 1586 aa29.62■■■□□ 2.33
COL1A1-207ENST00000486572 ATP10BO94823 1461 aa29.61■■■□□ 2.33
COL1A1-207ENST00000486572 NUP153P49790 1475 aaKnown RBP29.61■■■□□ 2.33
COL1A1-207ENST00000486572 EPRSP07814 1512 aaKnown RBP29.61■■■□□ 2.33
COL1A1-207ENST00000486572 ARID3CA6NKF2 412 aa29.59■■■□□ 2.33
COL1A1-207ENST00000486572 FMN1Q68DA7 1419 aa29.59■■■□□ 2.33
COL1A1-207ENST00000486572 CLIP1P30622 1438 aa29.51■■■□□ 2.31
COL1A1-207ENST00000486572 TSPOAP1O95153 1857 aa29.51■■■□□ 2.31
COL1A1-207ENST00000486572 MAP3K4Q9Y6R4 1608 aa29.49■■■□□ 2.31
COL1A1-207ENST00000486572 HECW1Q76N89 1606 aa29.48■■■□□ 2.31
COL1A1-207ENST00000486572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.47■■■□□ 2.31
COL1A1-207ENST00000486572 HNRNPUL2Q1KMD3 747 aaKnown RBP29.47■■■□□ 2.31
COL1A1-207ENST00000486572 KCNH8Q96L42 1107 aa29.44■■■□□ 2.3
COL1A1-207ENST00000486572 PPRC1Q5VV67 1664 aaKnown RBP29.44■■■□□ 2.3
COL1A1-207ENST00000486572 CFAP43Q8NDM7 1665 aa29.4■■■□□ 2.3
COL1A1-207ENST00000486572 CDK13Q14004 1512 aaKnown RBP29.4■■■□□ 2.3
COL1A1-207ENST00000486572 CEP162Q5TB80 1403 aa29.37■■■□□ 2.29
COL1A1-207ENST00000486572 ATP1B4Q9UN42 357 aaPredicted RBP29.37■■■□□ 2.29
COL1A1-207ENST00000486572 PCF11O94913 1555 aaKnown RBP29.37■■■□□ 2.29
COL1A1-207ENST00000486572 TEX14Q8IWB6 1497 aa29.36■■■□□ 2.29
COL1A1-207ENST00000486572 CD109Q6YHK3 1445 aa29.35■■■□□ 2.29
COL1A1-207ENST00000486572 CASKIN1Q8WXD9 1431 aa29.35■■■□□ 2.29
COL1A1-207ENST00000486572 LOC105371045A0A1W2PR82 267 aa29.34■■■□□ 2.29
COL1A1-207ENST00000486572 PLEKHD1A6NEE1 506 aa29.34■■■□□ 2.29
COL1A1-207ENST00000486572 ABCA9Q8IUA7 1624 aa29.34■■■□□ 2.29
COL1A1-207ENST00000486572 KDM6BO15054 1643 aa29.33■■■□□ 2.29
COL1A1-207ENST00000486572 MAGI3Q5TCQ9 1506 aa29.31■■■□□ 2.28
COL1A1-207ENST00000486572 FYCO1Q9BQS8 1478 aa29.29■■■□□ 2.28
COL1A1-207ENST00000486572 LRRIQ1Q96JM4 1722 aa29.28■■■□□ 2.28
COL1A1-207ENST00000486572 CCDC18Q5T9S5 1454 aa29.25■■■□□ 2.27
COL1A1-207ENST00000486572 CDK11AQ9UQ88 783 aaPredicted RBP29.23■■■□□ 2.27
COL1A1-207ENST00000486572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.19■■■□□ 2.26
COL1A1-207ENST00000486572 TTC37Q6PGP7 1564 aa29.17■■■□□ 2.26
COL1A1-207ENST00000486572 TROQ12816 1431 aaPredicted RBP29.16■■■□□ 2.26
COL1A1-207ENST00000486572 COL17A1Q9UMD9 1497 aaPredicted RBP29.14■■■□□ 2.26
COL1A1-207ENST00000486572 KIF14Q15058 1648 aa29.12■■■□□ 2.25
COL1A1-207ENST00000486572 NEO1Q92859 1461 aa29.1■■■□□ 2.25
COL1A1-207ENST00000486572 PHLDB1Q86UU1 1377 aa29.08■■■□□ 2.25
COL1A1-207ENST00000486572 ARAP3Q8WWN8 1544 aa29.06■■■□□ 2.24
COL1A1-207ENST00000486572 CFAP74Q9C0B2 1584 aa29.04■■■□□ 2.24
COL1A1-207ENST00000486572 FANCAO15360 1455 aa29.03■■■□□ 2.24
COL1A1-207ENST00000486572 VPS8Q8N3P4 1428 aa29.03■■■□□ 2.24
COL1A1-207ENST00000486572 MYO5CQ9NQX4 1742 aa29.01■■■□□ 2.23
COL1A1-207ENST00000486572 PLCH2O75038 1416 aa29.01■■■□□ 2.23
COL1A1-207ENST00000486572 AKNAQ7Z591 1439 aa28.94■■■□□ 2.22
COL1A1-207ENST00000486572 MTUS2Q5JR59 1369 aa28.92■■■□□ 2.22
COL1A1-207ENST00000486572 EHBP1L1Q8N3D4 1523 aa28.9■■■□□ 2.22
COL1A1-207ENST00000486572 ARHGAP5Q13017 1502 aa28.89■■■□□ 2.22
COL1A1-207ENST00000486572 PREX2Q70Z35 1606 aa28.89■■■□□ 2.22
COL1A1-207ENST00000486572 FRMPD1Q5SYB0 1578 aa28.88■■■□□ 2.21
COL1A1-207ENST00000486572 TIAM1Q13009 1591 aa28.88■■■□□ 2.21
COL1A1-207ENST00000486572 DENND4BO75064 1496 aaPredicted RBP28.87■■■□□ 2.21
COL1A1-207ENST00000486572 ADGRL1O94910 1474 aa28.87■■■□□ 2.21
COL1A1-207ENST00000486572 EFCAB2Q5VUJ9 269 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms