RNA–Protein interactions for RNA: ENST00000486390.1

NECAP2-205, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 572 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-205ENST00000486390 CUL7Q14999 1698 aa25.26■■□□□ 1.63
NECAP2-205ENST00000486390 NPM1P06748 294 aaKnown RBP eCLIP25.25■■□□□ 1.63
NECAP2-205ENST00000486390 TTBK1Q5TCY1 1321 aaPredicted RBP25.23■■□□□ 1.63
NECAP2-205ENST00000486390 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
NECAP2-205ENST00000486390 KIAA0586Q9BVV6 1533 aa25.18■■□□□ 1.62
NECAP2-205ENST00000486390 RUSC2Q8N2Y8 1516 aa25.17■■□□□ 1.62
NECAP2-205ENST00000486390 CARMIL2Q6F5E8 1435 aa25.07■■□□□ 1.6
NECAP2-205ENST00000486390 RAPGEF2Q9Y4G8 1499 aa25.04■■□□□ 1.6
NECAP2-205ENST00000486390 PTPRGP23470 1445 aa25.02■■□□□ 1.6
NECAP2-205ENST00000486390 IQGAP2Q13576 1575 aa24.97■■□□□ 1.59
NECAP2-205ENST00000486390 FAM69CQ0P6D2 419 aa24.96■■□□□ 1.59
NECAP2-205ENST00000486390 TNIKQ9UKE5 1360 aa24.95■■□□□ 1.59
NECAP2-205ENST00000486390 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
NECAP2-205ENST00000486390 ADCY10Q96PN6 1610 aa24.85■■□□□ 1.57
NECAP2-205ENST00000486390 CSRNP3Q8WYN3 585 aa24.83■■□□□ 1.57
NECAP2-205ENST00000486390 AEBP2Q6ZN18 517 aaPredicted RBP24.78■■□□□ 1.56
NECAP2-205ENST00000486390 ABCC10Q5T3U5 1492 aa24.77■■□□□ 1.56
NECAP2-205ENST00000486390 MAPKBP1O60336 1514 aa24.77■■□□□ 1.56
NECAP2-205ENST00000486390 UACAQ9BZF9 1416 aa24.77■■□□□ 1.56
NECAP2-205ENST00000486390 DISP1Q96F81 1524 aa24.76■■□□□ 1.55
NECAP2-205ENST00000486390 UGGT2Q9NYU1 1516 aa24.76■■□□□ 1.55
NECAP2-205ENST00000486390 GOLGA3Q08378 1498 aa24.75■■□□□ 1.55
NECAP2-205ENST00000486390 RANGAP1P46060 587 aaPredicted RBP24.74■■□□□ 1.55
NECAP2-205ENST00000486390 KIF13AQ9H1H9 1805 aa24.74■■□□□ 1.55
NECAP2-205ENST00000486390 CTTNBP2Q8WZ74 1663 aa24.73■■□□□ 1.55
NECAP2-205ENST00000486390 ABCC2Q92887 1545 aa24.72■■□□□ 1.55
NECAP2-205ENST00000486390 PRXQ9BXM0 1461 aa24.72■■□□□ 1.55
NECAP2-205ENST00000486390 P3H3Q8IVL6 736 aa24.71■■□□□ 1.55
NECAP2-205ENST00000486390 KIAA0556O60303 1618 aa24.69■■□□□ 1.54
NECAP2-205ENST00000486390 EEA1Q15075 1411 aa24.67■■□□□ 1.54
NECAP2-205ENST00000486390 DIP2BQ9P265 1576 aa24.67■■□□□ 1.54
NECAP2-205ENST00000486390 UHRF1BP1LA0JNW5 1464 aa24.66■■□□□ 1.54
NECAP2-205ENST00000486390 PLB1Q6P1J6 1458 aa24.66■■□□□ 1.54
NECAP2-205ENST00000486390 ASXL2Q76L83 1435 aa24.66■■□□□ 1.54
NECAP2-205ENST00000486390 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
NECAP2-205ENST00000486390 TSPOAP1O95153 1857 aa24.62■■□□□ 1.53
NECAP2-205ENST00000486390 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
NECAP2-205ENST00000486390 KCNH8Q96L42 1107 aa24.58■■□□□ 1.53
NECAP2-205ENST00000486390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.57■■□□□ 1.52
NECAP2-205ENST00000486390 HNRNPUL2Q1KMD3 747 aaKnown RBP24.57■■□□□ 1.52
NECAP2-205ENST00000486390 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
NECAP2-205ENST00000486390 KDM5BQ9UGL1 1544 aa24.55■■□□□ 1.52
NECAP2-205ENST00000486390 UBTFP17480 764 aaKnown RBP24.54■■□□□ 1.52
NECAP2-205ENST00000486390 ZCCHC11Q5TAX3 1644 aaKnown RBP24.52■■□□□ 1.52
NECAP2-205ENST00000486390 KDM6BO15054 1643 aa24.5■■□□□ 1.51
NECAP2-205ENST00000486390 EPRSP07814 1512 aaKnown RBP24.46■■□□□ 1.51
NECAP2-205ENST00000486390 WDR7Q9Y4E6 1490 aa24.45■■□□□ 1.5
NECAP2-205ENST00000486390 GLI2P10070 1586 aa24.44■■□□□ 1.5
NECAP2-205ENST00000486390 ABCA8O94911 1581 aa24.42■■□□□ 1.5
NECAP2-205ENST00000486390 TEX14Q8IWB6 1497 aa24.4■■□□□ 1.5
NECAP2-205ENST00000486390 ATP1B4Q9UN42 357 aaPredicted RBP24.39■■□□□ 1.49
NECAP2-205ENST00000486390 KIF21BO75037 1637 aa24.35■■□□□ 1.49
NECAP2-205ENST00000486390 FHOD3Q2V2M9 1422 aa24.35■■□□□ 1.49
NECAP2-205ENST00000486390 CD109Q6YHK3 1445 aa24.35■■□□□ 1.49
NECAP2-205ENST00000486390 SAMD9Q5K651 1589 aa24.33■■□□□ 1.48
NECAP2-205ENST00000486390 MAP3K4Q9Y6R4 1608 aa24.3■■□□□ 1.48
NECAP2-205ENST00000486390 ATP10BO94823 1461 aa24.3■■□□□ 1.48
NECAP2-205ENST00000486390 RAPGEF6Q8TEU7 1601 aa24.29■■□□□ 1.48
NECAP2-205ENST00000486390 PLEKHD1A6NEE1 506 aa24.29■■□□□ 1.48
NECAP2-205ENST00000486390 PPRC1Q5VV67 1664 aaKnown RBP24.25■■□□□ 1.47
NECAP2-205ENST00000486390 EFCAB5A4FU69 1503 aa24.24■■□□□ 1.47
NECAP2-205ENST00000486390 CFAP43Q8NDM7 1665 aa24.23■■□□□ 1.47
NECAP2-205ENST00000486390 MAGI3Q5TCQ9 1506 aa24.19■■□□□ 1.46
NECAP2-205ENST00000486390 NUP153P49790 1475 aaKnown RBP24.16■■□□□ 1.46
NECAP2-205ENST00000486390 COL17A1Q9UMD9 1497 aaPredicted RBP24.15■■□□□ 1.46
NECAP2-205ENST00000486390 KDM4FA0A1W2PPD8 638 aa24.13■■□□□ 1.45
NECAP2-205ENST00000486390 CDK11AQ9UQ88 783 aaPredicted RBP24.13■■□□□ 1.45
NECAP2-205ENST00000486390 FMN1Q68DA7 1419 aa24.12■■□□□ 1.45
NECAP2-205ENST00000486390 PHLDB1Q86UU1 1377 aa24.07■■□□□ 1.44
NECAP2-205ENST00000486390 ABCA9Q8IUA7 1624 aa24.06■■□□□ 1.44
NECAP2-205ENST00000486390 ARHGAP35Q9NRY4 1499 aa24.04■■□□□ 1.44
NECAP2-205ENST00000486390 RAPGEF3O95398 923 aa24.03■■□□□ 1.44
NECAP2-205ENST00000486390 CDK13Q14004 1512 aaKnown RBP24.01■■□□□ 1.43
NECAP2-205ENST00000486390 ADGRL1O94910 1474 aa24■■□□□ 1.43
NECAP2-205ENST00000486390 HECW1Q76N89 1606 aa24■■□□□ 1.43
NECAP2-205ENST00000486390 ARID4BQ4LE39 1312 aaPredicted RBP23.99■■□□□ 1.43
NECAP2-205ENST00000486390 NEO1Q92859 1461 aa23.99■■□□□ 1.43
NECAP2-205ENST00000486390 ARAP3Q8WWN8 1544 aa23.99■■□□□ 1.43
NECAP2-205ENST00000486390 FANCAO15360 1455 aa23.93■■□□□ 1.42
NECAP2-205ENST00000486390 CLIP1P30622 1438 aa23.93■■□□□ 1.42
NECAP2-205ENST00000486390 MYT1LQ9UL68 1186 aa23.92■■□□□ 1.42
NECAP2-205ENST00000486390 AKNAQ7Z591 1439 aa23.91■■□□□ 1.42
NECAP2-205ENST00000486390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.9■■□□□ 1.42
NECAP2-205ENST00000486390 EFCAB2Q5VUJ9 269 aa23.9■■□□□ 1.42
NECAP2-205ENST00000486390 DENND4BO75064 1496 aaPredicted RBP23.89■■□□□ 1.42
NECAP2-205ENST00000486390 CFAP74Q9C0B2 1584 aa23.87■■□□□ 1.41
NECAP2-205ENST00000486390 TTC37Q6PGP7 1564 aa23.85■■□□□ 1.41
NECAP2-205ENST00000486390 PLCH2O75038 1416 aa23.82■■□□□ 1.4
NECAP2-205ENST00000486390 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
NECAP2-205ENST00000486390 CASKIN1Q8WXD9 1431 aa23.82■■□□□ 1.4
NECAP2-205ENST00000486390 CCDC18Q5T9S5 1454 aa23.81■■□□□ 1.4
NECAP2-205ENST00000486390 KIF14Q15058 1648 aa23.81■■□□□ 1.4
NECAP2-205ENST00000486390 SCAPERQ9BY12 1400 aa23.8■■□□□ 1.4
NECAP2-205ENST00000486390 PCF11O94913 1555 aaKnown RBP23.77■■□□□ 1.4
NECAP2-205ENST00000486390 ARHGAP5Q13017 1502 aa23.76■■□□□ 1.39
NECAP2-205ENST00000486390 PLPPR3Q6T4P5 718 aa23.75■■□□□ 1.39
NECAP2-205ENST00000486390 MYO5CQ9NQX4 1742 aa23.75■■□□□ 1.39
NECAP2-205ENST00000486390 ZNF777Q9ULD5 760 aaPredicted RBP23.74■■□□□ 1.39
NECAP2-205ENST00000486390 MLECQ14165 292 aa23.73■■□□□ 1.39
NECAP2-205ENST00000486390 FYCO1Q9BQS8 1478 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms