RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 PRXQ9BXM0 1461 aa18.78■□□□□ 0.6
ERGIC3-215ENST00000486268 UBTFP17480 764 aaKnown RBP18.75■□□□□ 0.59
ERGIC3-215ENST00000486268 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
ERGIC3-215ENST00000486268 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
ERGIC3-215ENST00000486268 CEP162Q5TB80 1403 aa18.71■□□□□ 0.59
ERGIC3-215ENST00000486268 SHROOM2Q13796 1616 aa18.65■□□□□ 0.58
ERGIC3-215ENST00000486268 CTTNBP2Q8WZ74 1663 aa18.64■□□□□ 0.57
ERGIC3-215ENST00000486268 KIAA0586Q9BVV6 1533 aa18.64■□□□□ 0.57
ERGIC3-215ENST00000486268 RIMBP3CA6NJZ7 1639 aa18.61■□□□□ 0.57
ERGIC3-215ENST00000486268 RIMBP3BA6NNM3 1639 aa18.61■□□□□ 0.57
ERGIC3-215ENST00000486268 RIMBP3Q9UFD9 1639 aa18.61■□□□□ 0.57
ERGIC3-215ENST00000486268 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
ERGIC3-215ENST00000486268 IQGAP2Q13576 1575 aa18.59■□□□□ 0.57
ERGIC3-215ENST00000486268 ERCC6L2Q5T890 1561 aa18.59■□□□□ 0.57
ERGIC3-215ENST00000486268 CLIP1P30622 1438 aa18.57■□□□□ 0.56
ERGIC3-215ENST00000486268 JPH4Q96JJ6 628 aa18.54■□□□□ 0.56
ERGIC3-215ENST00000486268 UGGT2Q9NYU1 1516 aa18.51■□□□□ 0.55
ERGIC3-215ENST00000486268 PRG4Q92954 1404 aaPredicted RBP18.5■□□□□ 0.55
ERGIC3-215ENST00000486268 ARAP1Q96P48 1450 aa18.49■□□□□ 0.55
ERGIC3-215ENST00000486268 TRIM26Q12899 539 aaPredicted RBP18.47■□□□□ 0.55
ERGIC3-215ENST00000486268 DISP1Q96F81 1524 aa18.46■□□□□ 0.55
ERGIC3-215ENST00000486268 VPS8Q8N3P4 1428 aa18.44■□□□□ 0.54
ERGIC3-215ENST00000486268 KIAA0556O60303 1618 aa18.44■□□□□ 0.54
ERGIC3-215ENST00000486268 SAMD9Q5K651 1589 aa18.41■□□□□ 0.54
ERGIC3-215ENST00000486268 CARMIL2Q6F5E8 1435 aa18.38■□□□□ 0.53
ERGIC3-215ENST00000486268 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
ERGIC3-215ENST00000486268 CYB5RLQ6IPT4 315 aa18.35■□□□□ 0.53
ERGIC3-215ENST00000486268 ARHGAP35Q9NRY4 1499 aa18.34■□□□□ 0.53
ERGIC3-215ENST00000486268 EFCAB5A4FU69 1503 aa18.33■□□□□ 0.52
ERGIC3-215ENST00000486268 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
ERGIC3-215ENST00000486268 APLP2Q06481 763 aa18.29■□□□□ 0.52
ERGIC3-215ENST00000486268 PTPRGP23470 1445 aa18.29■□□□□ 0.52
ERGIC3-215ENST00000486268 P3H3Q8IVL6 736 aa18.28■□□□□ 0.52
ERGIC3-215ENST00000486268 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.52
ERGIC3-215ENST00000486268 ADCY10Q96PN6 1610 aa18.27■□□□□ 0.51
ERGIC3-215ENST00000486268 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
ERGIC3-215ENST00000486268 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
ERGIC3-215ENST00000486268 ABCA8O94911 1581 aa18.22■□□□□ 0.51
ERGIC3-215ENST00000486268 PLB1Q6P1J6 1458 aa18.21■□□□□ 0.51
ERGIC3-215ENST00000486268 UACAQ9BZF9 1416 aa18.2■□□□□ 0.5
ERGIC3-215ENST00000486268 MAP3K1Q13233 1512 aa18.19■□□□□ 0.5
ERGIC3-215ENST00000486268 ABCC2Q92887 1545 aa18.19■□□□□ 0.5
ERGIC3-215ENST00000486268 UHRF1BP1LA0JNW5 1464 aa18.19■□□□□ 0.5
ERGIC3-215ENST00000486268 RAPGEF6Q8TEU7 1601 aa18.16■□□□□ 0.5
ERGIC3-215ENST00000486268 FMN1Q68DA7 1419 aa18.15■□□□□ 0.5
ERGIC3-215ENST00000486268 PPARGC1BQ86YN6 1023 aaKnown RBP18.13■□□□□ 0.49
ERGIC3-215ENST00000486268 ZCCHC11Q5TAX3 1644 aaKnown RBP18.12■□□□□ 0.49
ERGIC3-215ENST00000486268 FYCO1Q9BQS8 1478 aa18.11■□□□□ 0.49
ERGIC3-215ENST00000486268 KDM5BQ9UGL1 1544 aa18.11■□□□□ 0.49
ERGIC3-215ENST00000486268 CASKIN1Q8WXD9 1431 aa18.1■□□□□ 0.49
ERGIC3-215ENST00000486268 NUP153P49790 1475 aaKnown RBP18.09■□□□□ 0.49
ERGIC3-215ENST00000486268 PCF11O94913 1555 aaKnown RBP18.08■□□□□ 0.49
ERGIC3-215ENST00000486268 LRRIQ1Q96JM4 1722 aa18.07■□□□□ 0.48
ERGIC3-215ENST00000486268 MAPKBP1O60336 1514 aa18.06■□□□□ 0.48
ERGIC3-215ENST00000486268 TIAM1Q13009 1591 aa18.05■□□□□ 0.48
ERGIC3-215ENST00000486268 ATP10BO94823 1461 aa18.05■□□□□ 0.48
ERGIC3-215ENST00000486268 HECW1Q76N89 1606 aa18.04■□□□□ 0.48
ERGIC3-215ENST00000486268 ARID3CA6NKF2 412 aa18.01■□□□□ 0.47
ERGIC3-215ENST00000486268 NPM1P06748 294 aaKnown RBP eCLIP18.01■□□□□ 0.47
ERGIC3-215ENST00000486268 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
ERGIC3-215ENST00000486268 CFAP43Q8NDM7 1665 aa18.01■□□□□ 0.47
ERGIC3-215ENST00000486268 CDK13Q14004 1512 aaKnown RBP18■□□□□ 0.47
ERGIC3-215ENST00000486268 ASXL2Q76L83 1435 aa17.99■□□□□ 0.47
ERGIC3-215ENST00000486268 KIF13AQ9H1H9 1805 aa17.99■□□□□ 0.47
ERGIC3-215ENST00000486268 EPRSP07814 1512 aaKnown RBP17.98■□□□□ 0.47
ERGIC3-215ENST00000486268 KANK4Q5T7N3 995 aaPredicted RBP17.98■□□□□ 0.47
ERGIC3-215ENST00000486268 LRRC9Q6ZRR7 1453 aa17.98■□□□□ 0.47
ERGIC3-215ENST00000486268 HRCP23327 699 aa17.97■□□□□ 0.47
ERGIC3-215ENST00000486268 DIP2BQ9P265 1576 aa17.96■□□□□ 0.47
ERGIC3-215ENST00000486268 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
ERGIC3-215ENST00000486268 ABCC10Q5T3U5 1492 aa17.94■□□□□ 0.46
ERGIC3-215ENST00000486268 CCDC18Q5T9S5 1454 aa17.94■□□□□ 0.46
ERGIC3-215ENST00000486268 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
ERGIC3-215ENST00000486268 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
ERGIC3-215ENST00000486268 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
ERGIC3-215ENST00000486268 GLI2P10070 1586 aa17.88■□□□□ 0.45
ERGIC3-215ENST00000486268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
ERGIC3-215ENST00000486268 ZEB1P37275 1124 aaPredicted RBP17.88■□□□□ 0.45
ERGIC3-215ENST00000486268 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
ERGIC3-215ENST00000486268 MAP3K4Q9Y6R4 1608 aa17.84■□□□□ 0.45
ERGIC3-215ENST00000486268 FAM69CQ0P6D2 419 aa17.84■□□□□ 0.45
ERGIC3-215ENST00000486268 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.45
ERGIC3-215ENST00000486268 CCNB3Q8WWL7 1395 aa17.83■□□□□ 0.45
ERGIC3-215ENST00000486268 KIF14Q15058 1648 aa17.83■□□□□ 0.44
ERGIC3-215ENST00000486268 TSPOAP1O95153 1857 aa17.82■□□□□ 0.44
ERGIC3-215ENST00000486268 MTUS2Q5JR59 1369 aa17.82■□□□□ 0.44
ERGIC3-215ENST00000486268 PLEKHD1A6NEE1 506 aa17.82■□□□□ 0.44
ERGIC3-215ENST00000486268 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
ERGIC3-215ENST00000486268 PPRC1Q5VV67 1664 aaKnown RBP17.82■□□□□ 0.44
ERGIC3-215ENST00000486268 ABCA9Q8IUA7 1624 aa17.82■□□□□ 0.44
ERGIC3-215ENST00000486268 TROQ12816 1431 aaPredicted RBP17.81■□□□□ 0.44
ERGIC3-215ENST00000486268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.79■□□□□ 0.44
ERGIC3-215ENST00000486268 TTC37Q6PGP7 1564 aa17.79■□□□□ 0.44
ERGIC3-215ENST00000486268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.79■□□□□ 0.446e-6■■■■□ 21.5
ERGIC3-215ENST00000486268 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.44
ERGIC3-215ENST00000486268 PHLDB1Q86UU1 1377 aa17.77■□□□□ 0.43
ERGIC3-215ENST00000486268 SUPT6HQ7KZ85 1726 aaKnown RBP17.75■□□□□ 0.43
ERGIC3-215ENST00000486268 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
ERGIC3-215ENST00000486268 NCOA2Q15596 1464 aa17.72■□□□□ 0.43
ERGIC3-215ENST00000486268 MYO5CQ9NQX4 1742 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms