RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 CHMP7Q8WUX9 453 aaPredicted RBP22.92■■□□□ 1.26
COL9A1-207ENST00000486080 FBLN2P98095 1184 aa22.9■■□□□ 1.26
COL9A1-207ENST00000486080 ARHGAP35Q9NRY4 1499 aa22.86■■□□□ 1.25
COL9A1-207ENST00000486080 ARAP1Q96P48 1450 aa22.83■■□□□ 1.25
COL9A1-207ENST00000486080 CHD1O14646 1710 aa22.83■■□□□ 1.25
COL9A1-207ENST00000486080 CEP170Q5SW79 1584 aa22.82■■□□□ 1.24
COL9A1-207ENST00000486080 IQGAP2Q13576 1575 aa22.81■■□□□ 1.24
COL9A1-207ENST00000486080 KIAA0586Q9BVV6 1533 aa22.77■■□□□ 1.24
COL9A1-207ENST00000486080 NUP160Q12769 1436 aa22.77■■□□□ 1.24
COL9A1-207ENST00000486080 VPS8Q8N3P4 1428 aa22.76■■□□□ 1.23
COL9A1-207ENST00000486080 P3H3Q8IVL6 736 aa22.75■■□□□ 1.23
COL9A1-207ENST00000486080 EFCAB5A4FU69 1503 aa22.74■■□□□ 1.23
COL9A1-207ENST00000486080 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
COL9A1-207ENST00000486080 FHOD3Q2V2M9 1422 aa22.7■■□□□ 1.22
COL9A1-207ENST00000486080 UGGT2Q9NYU1 1516 aa22.68■■□□□ 1.22
COL9A1-207ENST00000486080 PPARGC1BQ86YN6 1023 aaKnown RBP22.64■■□□□ 1.22
COL9A1-207ENST00000486080 DISP1Q96F81 1524 aa22.61■■□□□ 1.21
COL9A1-207ENST00000486080 JPH4Q96JJ6 628 aa22.6■■□□□ 1.21
COL9A1-207ENST00000486080 KIAA0556O60303 1618 aa22.58■■□□□ 1.21
COL9A1-207ENST00000486080 PCF11O94913 1555 aaKnown RBP22.55■■□□□ 1.2
COL9A1-207ENST00000486080 FMN1Q68DA7 1419 aa22.53■■□□□ 1.2
COL9A1-207ENST00000486080 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
COL9A1-207ENST00000486080 APLP2Q06481 763 aa22.51■■□□□ 1.19
COL9A1-207ENST00000486080 SHROOM2Q13796 1616 aa22.5■■□□□ 1.19
COL9A1-207ENST00000486080 TTBK1Q5TCY1 1321 aaPredicted RBP22.5■■□□□ 1.19
COL9A1-207ENST00000486080 CASKIN1Q8WXD9 1431 aa22.48■■□□□ 1.19
COL9A1-207ENST00000486080 CARMIL2Q6F5E8 1435 aa22.48■■□□□ 1.19
COL9A1-207ENST00000486080 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
COL9A1-207ENST00000486080 FYCO1Q9BQS8 1478 aa22.47■■□□□ 1.19
COL9A1-207ENST00000486080 ATP1B4Q9UN42 357 aaPredicted RBP22.47■■□□□ 1.19
COL9A1-207ENST00000486080 LRRIQ1Q96JM4 1722 aa22.42■■□□□ 1.18
COL9A1-207ENST00000486080 ERCC6L2Q5T890 1561 aa22.41■■□□□ 1.18
COL9A1-207ENST00000486080 KANK4Q5T7N3 995 aaPredicted RBP22.41■■□□□ 1.18
COL9A1-207ENST00000486080 TIAM1Q13009 1591 aa22.4■■□□□ 1.18
COL9A1-207ENST00000486080 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
COL9A1-207ENST00000486080 CFAP43Q8NDM7 1665 aa22.38■■□□□ 1.17
COL9A1-207ENST00000486080 MAP3K1Q13233 1512 aa22.38■■□□□ 1.17
COL9A1-207ENST00000486080 TRIM26Q12899 539 aaPredicted RBP22.37■■□□□ 1.17
COL9A1-207ENST00000486080 HECW1Q76N89 1606 aa22.35■■□□□ 1.17
COL9A1-207ENST00000486080 PCGF6Q9BYE7 350 aa22.34■■□□□ 1.17
COL9A1-207ENST00000486080 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
COL9A1-207ENST00000486080 PLB1Q6P1J6 1458 aa22.33■■□□□ 1.16
COL9A1-207ENST00000486080 PTPRGP23470 1445 aa22.3■■□□□ 1.16
COL9A1-207ENST00000486080 LRRC9Q6ZRR7 1453 aa22.3■■□□□ 1.16
COL9A1-207ENST00000486080 ARID3CA6NKF2 412 aa22.29■■□□□ 1.16
COL9A1-207ENST00000486080 NUP153P49790 1475 aaKnown RBP22.28■■□□□ 1.16
COL9A1-207ENST00000486080 EPRSP07814 1512 aaKnown RBP22.28■■□□□ 1.16
COL9A1-207ENST00000486080 ABCA8O94911 1581 aa22.27■■□□□ 1.16
COL9A1-207ENST00000486080 CDK13Q14004 1512 aaKnown RBP22.27■■□□□ 1.15
COL9A1-207ENST00000486080 CCDC18Q5T9S5 1454 aa22.26■■□□□ 1.15
COL9A1-207ENST00000486080 DNAJC5Q9H3Z4 198 aa22.24■■□□□ 1.15
COL9A1-207ENST00000486080 MAGI3Q5TCQ9 1506 aa22.2■■□□□ 1.14
COL9A1-207ENST00000486080 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
COL9A1-207ENST00000486080 UACAQ9BZF9 1416 aa22.17■■□□□ 1.14
COL9A1-207ENST00000486080 RIMBP3CA6NJZ7 1639 aa22.17■■□□□ 1.14
COL9A1-207ENST00000486080 RIMBP3BA6NNM3 1639 aa22.17■■□□□ 1.14
COL9A1-207ENST00000486080 RIMBP3Q9UFD9 1639 aa22.17■■□□□ 1.14
COL9A1-207ENST00000486080 ARHGEF11O15085 1522 aa22.15■■□□□ 1.14
COL9A1-207ENST00000486080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
COL9A1-207ENST00000486080 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
COL9A1-207ENST00000486080 EHBP1L1Q8N3D4 1523 aa22.14■■□□□ 1.13
COL9A1-207ENST00000486080 ATP10BO94823 1461 aa22.12■■□□□ 1.13
COL9A1-207ENST00000486080 ABCC2Q92887 1545 aa22.11■■□□□ 1.13
COL9A1-207ENST00000486080 PHLDB1Q86UU1 1377 aa22.1■■□□□ 1.13
COL9A1-207ENST00000486080 SUPT6HQ7KZ85 1726 aaKnown RBP22.09■■□□□ 1.13
COL9A1-207ENST00000486080 NCOA2Q15596 1464 aa22.07■■□□□ 1.12
COL9A1-207ENST00000486080 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
COL9A1-207ENST00000486080 UHRF1BP1LA0JNW5 1464 aa22.05■■□□□ 1.12
COL9A1-207ENST00000486080 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
COL9A1-207ENST00000486080 ADCY10Q96PN6 1610 aa22.03■■□□□ 1.12
COL9A1-207ENST00000486080 TROQ12816 1431 aaPredicted RBP22.02■■□□□ 1.12
COL9A1-207ENST00000486080 ZCCHC11Q5TAX3 1644 aaKnown RBP22■■□□□ 1.11
COL9A1-207ENST00000486080 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
COL9A1-207ENST00000486080 PLEKHD1A6NEE1 506 aa21.99■■□□□ 1.11
COL9A1-207ENST00000486080 KDM5BQ9UGL1 1544 aa21.98■■□□□ 1.11
COL9A1-207ENST00000486080 KIF14Q15058 1648 aa21.98■■□□□ 1.11
COL9A1-207ENST00000486080 MYOM3Q5VTT5 1437 aa21.95■■□□□ 1.1
COL9A1-207ENST00000486080 FGD6Q6ZV73 1430 aa21.93■■□□□ 1.1
COL9A1-207ENST00000486080 FAM50AQ14320 339 aaKnown RBP21.9■■□□□ 1.1
COL9A1-207ENST00000486080 ABCC10Q5T3U5 1492 aa21.86■■□□□ 1.09
COL9A1-207ENST00000486080 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
COL9A1-207ENST00000486080 PTPN23Q9H3S7 1636 aa21.86■■□□□ 1.09
COL9A1-207ENST00000486080 ITGAEP38570 1179 aa21.85■■□□□ 1.09
COL9A1-207ENST00000486080 GPATCH8Q9UKJ3 1502 aaKnown RBP21.83■■□□□ 1.09
COL9A1-207ENST00000486080 CDC42BPAQ5VT25 1732 aa21.83■■□□□ 1.09
COL9A1-207ENST00000486080 KCNH8Q96L42 1107 aa21.83■■□□□ 1.08
COL9A1-207ENST00000486080 ITSN2Q9NZM3 1697 aa21.82■■□□□ 1.08
COL9A1-207ENST00000486080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.82■■□□□ 1.08
COL9A1-207ENST00000486080 MIA2Q96PC5 1412 aa21.82■■□□□ 1.08
COL9A1-207ENST00000486080 TTC37Q6PGP7 1564 aa21.8■■□□□ 1.08
COL9A1-207ENST00000486080 TCOF1Q13428 1488 aaKnown RBP21.79■■□□□ 1.08
COL9A1-207ENST00000486080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.79■■□□□ 1.08
COL9A1-207ENST00000486080 NPM1P06748 294 aaKnown RBP eCLIP21.79■■□□□ 1.08
COL9A1-207ENST00000486080 WDR7Q9Y4E6 1490 aa21.78■■□□□ 1.08
COL9A1-207ENST00000486080 ASXL2Q76L83 1435 aa21.78■■□□□ 1.08
COL9A1-207ENST00000486080 CFDP1Q9UEE9 299 aaPredicted RBP21.77■■□□□ 1.08
COL9A1-207ENST00000486080 ZNF644Q9H582 1327 aaPredicted RBP21.76■■□□□ 1.07
COL9A1-207ENST00000486080 CDC42BPBQ9Y5S2 1711 aa21.74■■□□□ 1.07
COL9A1-207ENST00000486080 PREX2Q70Z35 1606 aa21.73■■□□□ 1.07
COL9A1-207ENST00000486080 ZNF777Q9ULD5 760 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms