RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 JPH4Q96JJ6 628 aa20.87■□□□□ 0.93
HMG20B-211ENST00000486028 ARAP1Q96P48 1450 aa20.84■□□□□ 0.93
HMG20B-211ENST00000486028 RAPGEF2Q9Y4G8 1499 aa20.83■□□□□ 0.93
HMG20B-211ENST00000486028 KIAA0586Q9BVV6 1533 aa20.83■□□□□ 0.92
HMG20B-211ENST00000486028 CSRNP3Q8WYN3 585 aa20.8■□□□□ 0.92
HMG20B-211ENST00000486028 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
HMG20B-211ENST00000486028 EEA1Q15075 1411 aa20.78■□□□□ 0.92
HMG20B-211ENST00000486028 PRG4Q92954 1404 aaPredicted RBP20.78■□□□□ 0.92
HMG20B-211ENST00000486028 PRXQ9BXM0 1461 aa20.75■□□□□ 0.91
HMG20B-211ENST00000486028 ERCC6L2Q5T890 1561 aa20.73■□□□□ 0.91
HMG20B-211ENST00000486028 FAM9AQ8IZU1 332 aaPredicted RBP20.73■□□□□ 0.91
HMG20B-211ENST00000486028 IQGAP2Q13576 1575 aa20.66■□□□□ 0.9
HMG20B-211ENST00000486028 CARMIL2Q6F5E8 1435 aa20.63■□□□□ 0.89
HMG20B-211ENST00000486028 UGGT2Q9NYU1 1516 aa20.57■□□□□ 0.88
HMG20B-211ENST00000486028 PTPRGP23470 1445 aa20.56■□□□□ 0.88
HMG20B-211ENST00000486028 TNIKQ9UKE5 1360 aa20.56■□□□□ 0.88
HMG20B-211ENST00000486028 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
HMG20B-211ENST00000486028 CTTNBP2Q8WZ74 1663 aa20.53■□□□□ 0.88
HMG20B-211ENST00000486028 DISP1Q96F81 1524 aa20.53■□□□□ 0.88
HMG20B-211ENST00000486028 TRHP20396 242 aaPredicted RBP20.5■□□□□ 0.87
HMG20B-211ENST00000486028 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
HMG20B-211ENST00000486028 NPM1P06748 294 aaKnown RBP eCLIP20.49■□□□□ 0.87
HMG20B-211ENST00000486028 KIF21BO75037 1637 aa20.49■□□□□ 0.87
HMG20B-211ENST00000486028 UBTFP17480 764 aaKnown RBP20.45■□□□□ 0.86
HMG20B-211ENST00000486028 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
HMG20B-211ENST00000486028 KIAA0556O60303 1618 aa20.44■□□□□ 0.86
HMG20B-211ENST00000486028 RANGAP1P46060 587 aaPredicted RBP20.4■□□□□ 0.86
HMG20B-211ENST00000486028 ADCY10Q96PN6 1610 aa20.39■□□□□ 0.86
HMG20B-211ENST00000486028 UACAQ9BZF9 1416 aa20.39■□□□□ 0.85
HMG20B-211ENST00000486028 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
HMG20B-211ENST00000486028 P3H3Q8IVL6 736 aa20.39■□□□□ 0.85
HMG20B-211ENST00000486028 UHRF1BP1LA0JNW5 1464 aa20.36■□□□□ 0.85
HMG20B-211ENST00000486028 ABCC2Q92887 1545 aa20.32■□□□□ 0.84
HMG20B-211ENST00000486028 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
HMG20B-211ENST00000486028 PLB1Q6P1J6 1458 aa20.29■□□□□ 0.84
HMG20B-211ENST00000486028 MAPKBP1O60336 1514 aa20.28■□□□□ 0.84
HMG20B-211ENST00000486028 EFCAB5A4FU69 1503 aa20.25■□□□□ 0.83
HMG20B-211ENST00000486028 KDM5BQ9UGL1 1544 aa20.24■□□□□ 0.83
HMG20B-211ENST00000486028 FAM69CQ0P6D2 419 aa20.24■□□□□ 0.83
HMG20B-211ENST00000486028 ABCA8O94911 1581 aa20.24■□□□□ 0.83
HMG20B-211ENST00000486028 FHOD3Q2V2M9 1422 aa20.23■□□□□ 0.83
HMG20B-211ENST00000486028 ABCC10Q5T3U5 1492 aa20.22■□□□□ 0.83
HMG20B-211ENST00000486028 ASXL2Q76L83 1435 aa20.21■□□□□ 0.83
HMG20B-211ENST00000486028 ZCCHC11Q5TAX3 1644 aaKnown RBP20.16■□□□□ 0.82
HMG20B-211ENST00000486028 ARID3CA6NKF2 412 aa20.15■□□□□ 0.82
HMG20B-211ENST00000486028 ARHGAP35Q9NRY4 1499 aa20.15■□□□□ 0.82
HMG20B-211ENST00000486028 DIP2BQ9P265 1576 aa20.13■□□□□ 0.81
HMG20B-211ENST00000486028 SENP3Q9H4L4 574 aaPredicted RBP20.13■□□□□ 0.81
HMG20B-211ENST00000486028 KIF13AQ9H1H9 1805 aa20.13■□□□□ 0.81
HMG20B-211ENST00000486028 ATP10BO94823 1461 aa20.12■□□□□ 0.81
HMG20B-211ENST00000486028 RAPGEF6Q8TEU7 1601 aa20.12■□□□□ 0.81
HMG20B-211ENST00000486028 FMN1Q68DA7 1419 aa20.11■□□□□ 0.81
HMG20B-211ENST00000486028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.11■□□□□ 0.81
HMG20B-211ENST00000486028 HNRNPUL2Q1KMD3 747 aaKnown RBP20.11■□□□□ 0.81
HMG20B-211ENST00000486028 WDR7Q9Y4E6 1490 aa20.1■□□□□ 0.81
HMG20B-211ENST00000486028 KCNH8Q96L42 1107 aa20.08■□□□□ 0.81
HMG20B-211ENST00000486028 EPRSP07814 1512 aaKnown RBP20.07■□□□□ 0.8
HMG20B-211ENST00000486028 NUP153P49790 1475 aaKnown RBP20.07■□□□□ 0.8
HMG20B-211ENST00000486028 CLIP1P30622 1438 aa20.07■□□□□ 0.8
HMG20B-211ENST00000486028 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
HMG20B-211ENST00000486028 GLI2P10070 1586 aa20.06■□□□□ 0.8
HMG20B-211ENST00000486028 ATP1B4Q9UN42 357 aaPredicted RBP20.06■□□□□ 0.8
HMG20B-211ENST00000486028 PLEKHD1A6NEE1 506 aa20.02■□□□□ 0.8
HMG20B-211ENST00000486028 TSPOAP1O95153 1857 aa19.96■□□□□ 0.79
HMG20B-211ENST00000486028 CEP162Q5TB80 1403 aa19.96■□□□□ 0.79
HMG20B-211ENST00000486028 CDK11AQ9UQ88 783 aaPredicted RBP19.95■□□□□ 0.78
HMG20B-211ENST00000486028 HECW1Q76N89 1606 aa19.94■□□□□ 0.78
HMG20B-211ENST00000486028 CD109Q6YHK3 1445 aa19.94■□□□□ 0.78
HMG20B-211ENST00000486028 CASKIN1Q8WXD9 1431 aa19.93■□□□□ 0.78
HMG20B-211ENST00000486028 MAP3K4Q9Y6R4 1608 aa19.93■□□□□ 0.78
HMG20B-211ENST00000486028 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
HMG20B-211ENST00000486028 TEX14Q8IWB6 1497 aa19.91■□□□□ 0.78
HMG20B-211ENST00000486028 MAGI3Q5TCQ9 1506 aa19.88■□□□□ 0.77
HMG20B-211ENST00000486028 CFAP43Q8NDM7 1665 aa19.87■□□□□ 0.77
HMG20B-211ENST00000486028 FYCO1Q9BQS8 1478 aa19.87■□□□□ 0.77
HMG20B-211ENST00000486028 PPRC1Q5VV67 1664 aaKnown RBP19.87■□□□□ 0.77
HMG20B-211ENST00000486028 PCF11O94913 1555 aaKnown RBP19.86■□□□□ 0.77
HMG20B-211ENST00000486028 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
HMG20B-211ENST00000486028 ABCA9Q8IUA7 1624 aa19.84■□□□□ 0.77
HMG20B-211ENST00000486028 KDM6BO15054 1643 aa19.83■□□□□ 0.76
HMG20B-211ENST00000486028 TROQ12816 1431 aaPredicted RBP19.81■□□□□ 0.76
HMG20B-211ENST00000486028 PHLDB1Q86UU1 1377 aa19.79■□□□□ 0.76
HMG20B-211ENST00000486028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.77■□□□□ 0.76
HMG20B-211ENST00000486028 LRRIQ1Q96JM4 1722 aa19.76■□□□□ 0.75
HMG20B-211ENST00000486028 COL17A1Q9UMD9 1497 aaPredicted RBP19.76■□□□□ 0.75
HMG20B-211ENST00000486028 NEO1Q92859 1461 aa19.73■□□□□ 0.75
HMG20B-211ENST00000486028 VPS8Q8N3P4 1428 aa19.73■□□□□ 0.75
HMG20B-211ENST00000486028 TTC37Q6PGP7 1564 aa19.72■□□□□ 0.75
HMG20B-211ENST00000486028 KIF14Q15058 1648 aa19.72■□□□□ 0.75
HMG20B-211ENST00000486028 PLCH2O75038 1416 aa19.71■□□□□ 0.75
HMG20B-211ENST00000486028 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
HMG20B-211ENST00000486028 EFCAB2Q5VUJ9 269 aa19.7■□□□□ 0.74
HMG20B-211ENST00000486028 FANCAO15360 1455 aa19.69■□□□□ 0.74
HMG20B-211ENST00000486028 MTUS2Q5JR59 1369 aa19.69■□□□□ 0.74
HMG20B-211ENST00000486028 AKNAQ7Z591 1439 aa19.68■□□□□ 0.74
HMG20B-211ENST00000486028 RAPGEF3O95398 923 aa19.65■□□□□ 0.74
HMG20B-211ENST00000486028 CFAP74Q9C0B2 1584 aa19.64■□□□□ 0.73
HMG20B-211ENST00000486028 MYO5CQ9NQX4 1742 aa19.62■□□□□ 0.73
HMG20B-211ENST00000486028 DENND4BO75064 1496 aaPredicted RBP19.61■□□□□ 0.73
HMG20B-211ENST00000486028 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms