RNA–Protein interactions for RNA: ENST00000486018.1

TPM2-206, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 699 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-206ENST00000486018 PRXQ9BXM0 1461 aa26.12■■□□□ 1.77
TPM2-206ENST00000486018 RAPGEF2Q9Y4G8 1499 aa26.04■■□□□ 1.76
TPM2-206ENST00000486018 FAM9AQ8IZU1 332 aaPredicted RBP26.04■■□□□ 1.76
TPM2-206ENST00000486018 NUP160Q12769 1436 aa26.04■■□□□ 1.76
TPM2-206ENST00000486018 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
TPM2-206ENST00000486018 KIF21BO75037 1637 aa25.94■■□□□ 1.74
TPM2-206ENST00000486018 ERCC6L2Q5T890 1561 aa25.94■■□□□ 1.74
TPM2-206ENST00000486018 KIAA0586Q9BVV6 1533 aa25.86■■□□□ 1.73
TPM2-206ENST00000486018 GOLGA3Q08378 1498 aa25.79■■□□□ 1.72
TPM2-206ENST00000486018 SHROOM2Q13796 1616 aa25.78■■□□□ 1.72
TPM2-206ENST00000486018 IQGAP2Q13576 1575 aa25.73■■□□□ 1.71
TPM2-206ENST00000486018 CTTNBP2Q8WZ74 1663 aa25.73■■□□□ 1.71
TPM2-206ENST00000486018 JPH4Q96JJ6 628 aa25.71■■□□□ 1.71
TPM2-206ENST00000486018 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
TPM2-206ENST00000486018 UGGT2Q9NYU1 1516 aa25.67■■□□□ 1.7
TPM2-206ENST00000486018 UBTFP17480 764 aaKnown RBP25.61■■□□□ 1.69
TPM2-206ENST00000486018 EHMT2Q96KQ7 1210 aa25.61■■□□□ 1.69
TPM2-206ENST00000486018 DISP1Q96F81 1524 aa25.58■■□□□ 1.69
TPM2-206ENST00000486018 TNIKQ9UKE5 1360 aa25.58■■□□□ 1.69
TPM2-206ENST00000486018 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
TPM2-206ENST00000486018 SAMD9Q5K651 1589 aa25.5■■□□□ 1.67
TPM2-206ENST00000486018 CARMIL2Q6F5E8 1435 aa25.5■■□□□ 1.67
TPM2-206ENST00000486018 KIAA0556O60303 1618 aa25.49■■□□□ 1.67
TPM2-206ENST00000486018 AEBP2Q6ZN18 517 aaPredicted RBP25.47■■□□□ 1.67
TPM2-206ENST00000486018 KIF13AQ9H1H9 1805 aa25.45■■□□□ 1.66
TPM2-206ENST00000486018 EFCAB5A4FU69 1503 aa25.43■■□□□ 1.66
TPM2-206ENST00000486018 NPM1P06748 294 aaKnown RBP eCLIP25.41■■□□□ 1.66
TPM2-206ENST00000486018 ARHGAP35Q9NRY4 1499 aa25.4■■□□□ 1.66
TPM2-206ENST00000486018 FAM69CQ0P6D2 419 aa25.4■■□□□ 1.66
TPM2-206ENST00000486018 ADCY10Q96PN6 1610 aa25.37■■□□□ 1.65
TPM2-206ENST00000486018 PTPRGP23470 1445 aa25.37■■□□□ 1.65
TPM2-206ENST00000486018 RANGAP1P46060 587 aaPredicted RBP25.35■■□□□ 1.65
TPM2-206ENST00000486018 TTBK1Q5TCY1 1321 aaPredicted RBP25.35■■□□□ 1.65
TPM2-206ENST00000486018 CLIP1P30622 1438 aa25.34■■□□□ 1.65
TPM2-206ENST00000486018 ABCC10Q5T3U5 1492 aa25.34■■□□□ 1.65
TPM2-206ENST00000486018 FHOD3Q2V2M9 1422 aa25.32■■□□□ 1.64
TPM2-206ENST00000486018 CEP162Q5TB80 1403 aa25.32■■□□□ 1.64
TPM2-206ENST00000486018 P3H3Q8IVL6 736 aa25.32■■□□□ 1.64
TPM2-206ENST00000486018 MAPKBP1O60336 1514 aa25.3■■□□□ 1.64
TPM2-206ENST00000486018 DIP2BQ9P265 1576 aa25.25■■□□□ 1.63
TPM2-206ENST00000486018 ABCA8O94911 1581 aa25.23■■□□□ 1.63
TPM2-206ENST00000486018 UHRF1BP1LA0JNW5 1464 aa25.23■■□□□ 1.63
TPM2-206ENST00000486018 UACAQ9BZF9 1416 aa25.22■■□□□ 1.63
TPM2-206ENST00000486018 PLB1Q6P1J6 1458 aa25.21■■□□□ 1.63
TPM2-206ENST00000486018 ABCC2Q92887 1545 aa25.18■■□□□ 1.62
TPM2-206ENST00000486018 FMN1Q68DA7 1419 aa25.18■■□□□ 1.62
TPM2-206ENST00000486018 TSPOAP1O95153 1857 aa25.13■■□□□ 1.61
TPM2-206ENST00000486018 RAPGEF6Q8TEU7 1601 aa25.12■■□□□ 1.61
TPM2-206ENST00000486018 KDM5BQ9UGL1 1544 aa25.1■■□□□ 1.61
TPM2-206ENST00000486018 NUP153P49790 1475 aaKnown RBP25.09■■□□□ 1.61
TPM2-206ENST00000486018 CASKIN1Q8WXD9 1431 aa25.07■■□□□ 1.6
TPM2-206ENST00000486018 ASXL2Q76L83 1435 aa25.06■■□□□ 1.6
TPM2-206ENST00000486018 KDM6BO15054 1643 aa25.04■■□□□ 1.6
TPM2-206ENST00000486018 ATP10BO94823 1461 aa25.02■■□□□ 1.6
TPM2-206ENST00000486018 PCF11O94913 1555 aaKnown RBP25.02■■□□□ 1.6
TPM2-206ENST00000486018 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.59
TPM2-206ENST00000486018 FYCO1Q9BQS8 1478 aa25.01■■□□□ 1.59
TPM2-206ENST00000486018 ZCCHC11Q5TAX3 1644 aaKnown RBP24.99■■□□□ 1.59
TPM2-206ENST00000486018 HECW1Q76N89 1606 aa24.99■■□□□ 1.59
TPM2-206ENST00000486018 KDM4FA0A1W2PPD8 638 aa24.98■■□□□ 1.59
TPM2-206ENST00000486018 EPRSP07814 1512 aaKnown RBP24.96■■□□□ 1.59
TPM2-206ENST00000486018 GLI2P10070 1586 aa24.94■■□□□ 1.58
TPM2-206ENST00000486018 LRRIQ1Q96JM4 1722 aa24.94■■□□□ 1.58
TPM2-206ENST00000486018 PPRC1Q5VV67 1664 aaKnown RBP24.93■■□□□ 1.58
TPM2-206ENST00000486018 CDK13Q14004 1512 aaKnown RBP24.91■■□□□ 1.58
TPM2-206ENST00000486018 ARID3CA6NKF2 412 aa24.89■■□□□ 1.58
TPM2-206ENST00000486018 CCDC18Q5T9S5 1454 aa24.88■■□□□ 1.57
TPM2-206ENST00000486018 COL17A1Q9UMD9 1497 aaPredicted RBP24.85■■□□□ 1.57
TPM2-206ENST00000486018 ATP1B4Q9UN42 357 aaPredicted RBP24.85■■□□□ 1.57
TPM2-206ENST00000486018 WDR7Q9Y4E6 1490 aa24.84■■□□□ 1.57
TPM2-206ENST00000486018 MAP3K4Q9Y6R4 1608 aa24.8■■□□□ 1.56
TPM2-206ENST00000486018 MAP3K1Q13233 1512 aa24.79■■□□□ 1.56
TPM2-206ENST00000486018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.78■■□□□ 1.56
TPM2-206ENST00000486018 HNRNPUL2Q1KMD3 747 aaKnown RBP24.78■■□□□ 1.56
TPM2-206ENST00000486018 MAGI3Q5TCQ9 1506 aa24.77■■□□□ 1.56
TPM2-206ENST00000486018 PLEKHD1A6NEE1 506 aa24.77■■□□□ 1.56
TPM2-206ENST00000486018 KCNH8Q96L42 1107 aa24.77■■□□□ 1.56
TPM2-206ENST00000486018 TIAM1Q13009 1591 aa24.76■■□□□ 1.55
TPM2-206ENST00000486018 CFAP43Q8NDM7 1665 aa24.75■■□□□ 1.55
TPM2-206ENST00000486018 CDK11AQ9UQ88 783 aaPredicted RBP24.74■■□□□ 1.55
TPM2-206ENST00000486018 TROQ12816 1431 aaPredicted RBP24.74■■□□□ 1.55
TPM2-206ENST00000486018 TEX14Q8IWB6 1497 aa24.71■■□□□ 1.55
TPM2-206ENST00000486018 CD109Q6YHK3 1445 aa24.67■■□□□ 1.54
TPM2-206ENST00000486018 ADGRL1O94910 1474 aa24.65■■□□□ 1.54
TPM2-206ENST00000486018 LRRC9Q6ZRR7 1453 aa24.65■■□□□ 1.54
TPM2-206ENST00000486018 ABCA9Q8IUA7 1624 aa24.64■■□□□ 1.54
TPM2-206ENST00000486018 KANK4Q5T7N3 995 aaPredicted RBP24.64■■□□□ 1.54
TPM2-206ENST00000486018 EHBP1L1Q8N3D4 1523 aa24.63■■□□□ 1.53
TPM2-206ENST00000486018 KIF14Q15058 1648 aa24.63■■□□□ 1.53
TPM2-206ENST00000486018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.62■■□□□ 1.53
TPM2-206ENST00000486018 MTUS2Q5JR59 1369 aa24.61■■□□□ 1.53
TPM2-206ENST00000486018 APLP2Q06481 763 aa24.59■■□□□ 1.53
TPM2-206ENST00000486018 TTC37Q6PGP7 1564 aa24.58■■□□□ 1.52
TPM2-206ENST00000486018 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
TPM2-206ENST00000486018 PLCH2O75038 1416 aa24.5■■□□□ 1.51
TPM2-206ENST00000486018 SUPT6HQ7KZ85 1726 aaKnown RBP24.49■■□□□ 1.51
TPM2-206ENST00000486018 ARAP3Q8WWN8 1544 aa24.49■■□□□ 1.51
TPM2-206ENST00000486018 GPATCH8Q9UKJ3 1502 aaKnown RBP24.48■■□□□ 1.51
TPM2-206ENST00000486018 CDC42BPAQ5VT25 1732 aa24.44■■□□□ 1.5
TPM2-206ENST00000486018 MYO5CQ9NQX4 1742 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms