RNA–Protein interactions for RNA: ENST00000485589.1

NPDC1-204, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 506 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-204ENST00000485589 KIF13AQ9H1H9 1805 aa30.93■■■□□ 2.54
NPDC1-204ENST00000485589 KIF27Q86VH2 1401 aa30.9■■■□□ 2.54
NPDC1-204ENST00000485589 JPH4Q96JJ6 628 aa30.89■■■□□ 2.54
NPDC1-204ENST00000485589 KIAA0586Q9BVV6 1533 aa30.8■■■□□ 2.52
NPDC1-204ENST00000485589 ADCY10Q96PN6 1610 aa30.78■■■□□ 2.52
NPDC1-204ENST00000485589 CARMIL1Q5VZK9 1371 aa30.69■■■□□ 2.5
NPDC1-204ENST00000485589 MAPKBP1O60336 1514 aa30.61■■■□□ 2.49
NPDC1-204ENST00000485589 IQGAP2Q13576 1575 aa30.61■■■□□ 2.49
NPDC1-204ENST00000485589 DIP2BQ9P265 1576 aa30.58■■■□□ 2.49
NPDC1-204ENST00000485589 ABCC10Q5T3U5 1492 aa30.53■■■□□ 2.48
NPDC1-204ENST00000485589 TSPOAP1O95153 1857 aa30.48■■■□□ 2.47
NPDC1-204ENST00000485589 DISP1Q96F81 1524 aa30.47■■■□□ 2.47
NPDC1-204ENST00000485589 RAPGEF2Q9Y4G8 1499 aa30.46■■■□□ 2.47
NPDC1-204ENST00000485589 CTTNBP2Q8WZ74 1663 aa30.46■■■□□ 2.47
NPDC1-204ENST00000485589 PTPRGP23470 1445 aa30.43■■■□□ 2.46
NPDC1-204ENST00000485589 TNIKQ9UKE5 1360 aa30.41■■■□□ 2.46
NPDC1-204ENST00000485589 UGGT2Q9NYU1 1516 aa30.4■■■□□ 2.46
NPDC1-204ENST00000485589 CARMIL2Q6F5E8 1435 aa30.39■■■□□ 2.46
NPDC1-204ENST00000485589 FAM69CQ0P6D2 419 aa30.39■■■□□ 2.46
NPDC1-204ENST00000485589 NPM1P06748 294 aaKnown RBP eCLIP30.38■■■□□ 2.45
NPDC1-204ENST00000485589 TTBK1Q5TCY1 1321 aaPredicted RBP30.38■■■□□ 2.45
NPDC1-204ENST00000485589 KIAA0556O60303 1618 aa30.37■■■□□ 2.45
NPDC1-204ENST00000485589 ABCC2Q92887 1545 aa30.35■■■□□ 2.45
NPDC1-204ENST00000485589 PPRC1Q5VV67 1664 aaKnown RBP30.31■■■□□ 2.44
NPDC1-204ENST00000485589 UHRF1BP1LA0JNW5 1464 aa30.3■■■□□ 2.44
NPDC1-204ENST00000485589 ZCCHC11Q5TAX3 1644 aaKnown RBP30.25■■■□□ 2.43
NPDC1-204ENST00000485589 UACAQ9BZF9 1416 aa30.25■■■□□ 2.43
NPDC1-204ENST00000485589 KDM6BO15054 1643 aa30.24■■■□□ 2.43
NPDC1-204ENST00000485589 PRXQ9BXM0 1461 aa30.23■■■□□ 2.43
NPDC1-204ENST00000485589 ASXL2Q76L83 1435 aa30.22■■■□□ 2.43
NPDC1-204ENST00000485589 KDM5BQ9UGL1 1544 aa30.19■■■□□ 2.42
NPDC1-204ENST00000485589 GLI2P10070 1586 aa30.19■■■□□ 2.42
NPDC1-204ENST00000485589 PLB1Q6P1J6 1458 aa30.15■■■□□ 2.42
NPDC1-204ENST00000485589 AEBP2Q6ZN18 517 aaPredicted RBP30.13■■■□□ 2.41
NPDC1-204ENST00000485589 MAP3K4Q9Y6R4 1608 aa30.13■■■□□ 2.41
NPDC1-204ENST00000485589 ABCA8O94911 1581 aa30.08■■■□□ 2.41
NPDC1-204ENST00000485589 EPRSP07814 1512 aaKnown RBP30.07■■■□□ 2.4
NPDC1-204ENST00000485589 GOLGA3Q08378 1498 aa30.03■■■□□ 2.4
NPDC1-204ENST00000485589 WDR7Q9Y4E6 1490 aa29.95■■■□□ 2.39
NPDC1-204ENST00000485589 SAMD9Q5K651 1589 aa29.94■■■□□ 2.38
NPDC1-204ENST00000485589 COL17A1Q9UMD9 1497 aaPredicted RBP29.94■■■□□ 2.38
NPDC1-204ENST00000485589 CFAP43Q8NDM7 1665 aa29.89■■■□□ 2.38
NPDC1-204ENST00000485589 CSRNP3Q8WYN3 585 aa29.87■■■□□ 2.37
NPDC1-204ENST00000485589 KDM4FA0A1W2PPD8 638 aa29.83■■■□□ 2.37
NPDC1-204ENST00000485589 P3H3Q8IVL6 736 aa29.81■■■□□ 2.36
NPDC1-204ENST00000485589 TEX14Q8IWB6 1497 aa29.8■■■□□ 2.36
NPDC1-204ENST00000485589 RAPGEF6Q8TEU7 1601 aa29.78■■■□□ 2.36
NPDC1-204ENST00000485589 EEA1Q15075 1411 aa29.77■■■□□ 2.36
NPDC1-204ENST00000485589 ATP10BO94823 1461 aa29.75■■■□□ 2.35
NPDC1-204ENST00000485589 KIF21BO75037 1637 aa29.74■■■□□ 2.35
NPDC1-204ENST00000485589 MAGI3Q5TCQ9 1506 aa29.73■■■□□ 2.35
NPDC1-204ENST00000485589 ARID3CA6NKF2 412 aa29.71■■■□□ 2.35
NPDC1-204ENST00000485589 KCNH8Q96L42 1107 aa29.7■■■□□ 2.35
NPDC1-204ENST00000485589 CD109Q6YHK3 1445 aa29.7■■■□□ 2.34
NPDC1-204ENST00000485589 FAM9AQ8IZU1 332 aaPredicted RBP29.68■■■□□ 2.34
NPDC1-204ENST00000485589 ABCA9Q8IUA7 1624 aa29.67■■■□□ 2.34
NPDC1-204ENST00000485589 ADGRL1O94910 1474 aa29.65■■■□□ 2.34
NPDC1-204ENST00000485589 FHOD3Q2V2M9 1422 aa29.64■■■□□ 2.34
NPDC1-204ENST00000485589 NUP153P49790 1475 aaKnown RBP29.63■■■□□ 2.33
NPDC1-204ENST00000485589 RANGAP1P46060 587 aaPredicted RBP29.59■■■□□ 2.33
NPDC1-204ENST00000485589 EFCAB5A4FU69 1503 aa29.54■■■□□ 2.32
NPDC1-204ENST00000485589 ARAP3Q8WWN8 1544 aa29.5■■■□□ 2.31
NPDC1-204ENST00000485589 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
NPDC1-204ENST00000485589 FRMPD1Q5SYB0 1578 aa29.46■■■□□ 2.31
NPDC1-204ENST00000485589 EHMT2Q96KQ7 1210 aa29.4■■■□□ 2.3
NPDC1-204ENST00000485589 CDK13Q14004 1512 aaKnown RBP29.4■■■□□ 2.3
NPDC1-204ENST00000485589 TTC37Q6PGP7 1564 aa29.39■■■□□ 2.3
NPDC1-204ENST00000485589 LRRIQ1Q96JM4 1722 aa29.39■■■□□ 2.3
NPDC1-204ENST00000485589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.37■■■□□ 2.29
NPDC1-204ENST00000485589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.37■■■□□ 2.29
NPDC1-204ENST00000485589 HNRNPUL2Q1KMD3 747 aaKnown RBP29.37■■■□□ 2.29
NPDC1-204ENST00000485589 RICTORQ6R327 1708 aa29.37■■■□□ 2.29
NPDC1-204ENST00000485589 NEO1Q92859 1461 aa29.36■■■□□ 2.29
NPDC1-204ENST00000485589 ARHGAP35Q9NRY4 1499 aa29.35■■■□□ 2.29
NPDC1-204ENST00000485589 PHLDB1Q86UU1 1377 aa29.28■■■□□ 2.28
NPDC1-204ENST00000485589 HECW2Q9P2P5 1572 aa29.28■■■□□ 2.28
NPDC1-204ENST00000485589 RAPGEF3O95398 923 aa29.28■■■□□ 2.28
NPDC1-204ENST00000485589 HECW1Q76N89 1606 aa29.27■■■□□ 2.28
NPDC1-204ENST00000485589 ADAMTSL3P82987 1691 aa29.27■■■□□ 2.28
NPDC1-204ENST00000485589 UBTFP17480 764 aaKnown RBP29.26■■■□□ 2.27
NPDC1-204ENST00000485589 CFAP74Q9C0B2 1584 aa29.26■■■□□ 2.27
NPDC1-204ENST00000485589 PLEKHD1A6NEE1 506 aa29.23■■■□□ 2.27
NPDC1-204ENST00000485589 SIGLEC1Q9BZZ2 1709 aa29.23■■■□□ 2.27
NPDC1-204ENST00000485589 BCORL1Q5H9F3 1711 aa29.22■■■□□ 2.27
NPDC1-204ENST00000485589 KIF14Q15058 1648 aa29.2■■■□□ 2.27
NPDC1-204ENST00000485589 FANCAO15360 1455 aa29.2■■■□□ 2.26
NPDC1-204ENST00000485589 MYO5CQ9NQX4 1742 aa29.2■■■□□ 2.26
NPDC1-204ENST00000485589 ARHGEF40Q8TER5 1519 aa29.2■■■□□ 2.26
NPDC1-204ENST00000485589 FMN1Q68DA7 1419 aa29.18■■■□□ 2.26
NPDC1-204ENST00000485589 AKNAQ7Z591 1439 aa29.18■■■□□ 2.26
NPDC1-204ENST00000485589 MADDQ8WXG6 1647 aa29.14■■■□□ 2.26
NPDC1-204ENST00000485589 DENND4BO75064 1496 aaPredicted RBP29.13■■■□□ 2.25
NPDC1-204ENST00000485589 ZMYM4Q5VZL5 1548 aa29.13■■■□□ 2.25
NPDC1-204ENST00000485589 PCF11O94913 1555 aaKnown RBP29.11■■■□□ 2.25
NPDC1-204ENST00000485589 PLCH2O75038 1416 aa29.06■■■□□ 2.24
NPDC1-204ENST00000485589 CDC42BPBQ9Y5S2 1711 aa29.06■■■□□ 2.24
NPDC1-204ENST00000485589 RIMS1Q86UR5 1692 aaKnown RBP29.05■■■□□ 2.24
NPDC1-204ENST00000485589 PTPRMP28827 1452 aa29.05■■■□□ 2.24
NPDC1-204ENST00000485589 ATP1B4Q9UN42 357 aaPredicted RBP29.05■■■□□ 2.24
NPDC1-204ENST00000485589 YEATS2Q9ULM3 1422 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms