RNA–Protein interactions for RNA: ENST00000485578.1

PKDCC-207, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-207ENST00000485578 SHROOM2Q13796 1616 aa23.87■■□□□ 1.41
PKDCC-207ENST00000485578 CARMIL1Q5VZK9 1371 aa23.85■■□□□ 1.41
PKDCC-207ENST00000485578 PRG4Q92954 1404 aaPredicted RBP23.77■■□□□ 1.4
PKDCC-207ENST00000485578 NPM1P06748 294 aaKnown RBP eCLIP23.77■■□□□ 1.4
PKDCC-207ENST00000485578 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
PKDCC-207ENST00000485578 KIF13AQ9H1H9 1805 aa23.73■■□□□ 1.39
PKDCC-207ENST00000485578 FAM9AQ8IZU1 332 aaPredicted RBP23.72■■□□□ 1.39
PKDCC-207ENST00000485578 JPH4Q96JJ6 628 aa23.72■■□□□ 1.39
PKDCC-207ENST00000485578 RAPGEF2Q9Y4G8 1499 aa23.72■■□□□ 1.39
PKDCC-207ENST00000485578 CTTNBP2Q8WZ74 1663 aa23.7■■□□□ 1.39
PKDCC-207ENST00000485578 KIAA0586Q9BVV6 1533 aa23.69■■□□□ 1.38
PKDCC-207ENST00000485578 FAM69CQ0P6D2 419 aa23.68■■□□□ 1.38
PKDCC-207ENST00000485578 IQGAP2Q13576 1575 aa23.67■■□□□ 1.38
PKDCC-207ENST00000485578 PRXQ9BXM0 1461 aa23.63■■□□□ 1.37
PKDCC-207ENST00000485578 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
PKDCC-207ENST00000485578 MAPKBP1O60336 1514 aa23.59■■□□□ 1.37
PKDCC-207ENST00000485578 TTBK1Q5TCY1 1321 aaPredicted RBP23.58■■□□□ 1.36
PKDCC-207ENST00000485578 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
PKDCC-207ENST00000485578 CSRNP3Q8WYN3 585 aa23.55■■□□□ 1.36
PKDCC-207ENST00000485578 DIP2BQ9P265 1576 aa23.54■■□□□ 1.36
PKDCC-207ENST00000485578 KDM6BO15054 1643 aa23.51■■□□□ 1.35
PKDCC-207ENST00000485578 ADCY10Q96PN6 1610 aa23.51■■□□□ 1.35
PKDCC-207ENST00000485578 DISP1Q96F81 1524 aa23.5■■□□□ 1.35
PKDCC-207ENST00000485578 EEA1Q15075 1411 aa23.49■■□□□ 1.35
PKDCC-207ENST00000485578 KIAA0556O60303 1618 aa23.48■■□□□ 1.35
PKDCC-207ENST00000485578 UGGT2Q9NYU1 1516 aa23.47■■□□□ 1.35
PKDCC-207ENST00000485578 KIF21BO75037 1637 aa23.46■■□□□ 1.35
PKDCC-207ENST00000485578 TSPOAP1O95153 1857 aa23.43■■□□□ 1.34
PKDCC-207ENST00000485578 RANGAP1P46060 587 aaPredicted RBP23.4■■□□□ 1.34
PKDCC-207ENST00000485578 CARMIL2Q6F5E8 1435 aa23.39■■□□□ 1.33
PKDCC-207ENST00000485578 PTPRGP23470 1445 aa23.37■■□□□ 1.33
PKDCC-207ENST00000485578 TNIKQ9UKE5 1360 aa23.36■■□□□ 1.33
PKDCC-207ENST00000485578 KDM4FA0A1W2PPD8 638 aa23.34■■□□□ 1.33
PKDCC-207ENST00000485578 P3H3Q8IVL6 736 aa23.33■■□□□ 1.33
PKDCC-207ENST00000485578 SAMD9Q5K651 1589 aa23.3■■□□□ 1.32
PKDCC-207ENST00000485578 ABCC2Q92887 1545 aa23.28■■□□□ 1.32
PKDCC-207ENST00000485578 PLB1Q6P1J6 1458 aa23.27■■□□□ 1.32
PKDCC-207ENST00000485578 GOLGA3Q08378 1498 aa23.26■■□□□ 1.31
PKDCC-207ENST00000485578 ASXL2Q76L83 1435 aa23.24■■□□□ 1.31
PKDCC-207ENST00000485578 ZCCHC11Q5TAX3 1644 aaKnown RBP23.22■■□□□ 1.31
PKDCC-207ENST00000485578 UACAQ9BZF9 1416 aa23.21■■□□□ 1.31
PKDCC-207ENST00000485578 GLI2P10070 1586 aa23.2■■□□□ 1.3
PKDCC-207ENST00000485578 FHOD3Q2V2M9 1422 aa23.2■■□□□ 1.3
PKDCC-207ENST00000485578 UBTFP17480 764 aaKnown RBP23.2■■□□□ 1.3
PKDCC-207ENST00000485578 ABCA8O94911 1581 aa23.19■■□□□ 1.3
PKDCC-207ENST00000485578 UHRF1BP1LA0JNW5 1464 aa23.17■■□□□ 1.3
PKDCC-207ENST00000485578 ARID3CA6NKF2 412 aa23.16■■□□□ 1.3
PKDCC-207ENST00000485578 ADGRL1O94910 1474 aa23.15■■□□□ 1.3
PKDCC-207ENST00000485578 TEX14Q8IWB6 1497 aa23.15■■□□□ 1.3
PKDCC-207ENST00000485578 ILDR1Q86SU0 546 aaPredicted RBP23.11■■□□□ 1.29
PKDCC-207ENST00000485578 PPRC1Q5VV67 1664 aaKnown RBP23.11■■□□□ 1.29
PKDCC-207ENST00000485578 RAPGEF6Q8TEU7 1601 aa23.1■■□□□ 1.29
PKDCC-207ENST00000485578 EFCAB5A4FU69 1503 aa23.08■■□□□ 1.29
PKDCC-207ENST00000485578 KDM5BQ9UGL1 1544 aa23.08■■□□□ 1.29
PKDCC-207ENST00000485578 EPRSP07814 1512 aaKnown RBP23.08■■□□□ 1.28
PKDCC-207ENST00000485578 ARHGAP35Q9NRY4 1499 aa23.05■■□□□ 1.28
PKDCC-207ENST00000485578 MAP3K4Q9Y6R4 1608 aa23.05■■□□□ 1.28
PKDCC-207ENST00000485578 NUP153P49790 1475 aaKnown RBP22.98■■□□□ 1.27
PKDCC-207ENST00000485578 LRRIQ1Q96JM4 1722 aa22.97■■□□□ 1.27
PKDCC-207ENST00000485578 COL17A1Q9UMD9 1497 aaPredicted RBP22.97■■□□□ 1.27
PKDCC-207ENST00000485578 WDR7Q9Y4E6 1490 aa22.97■■□□□ 1.27
PKDCC-207ENST00000485578 ATP10BO94823 1461 aa22.96■■□□□ 1.27
PKDCC-207ENST00000485578 HECW2Q9P2P5 1572 aa22.96■■□□□ 1.27
PKDCC-207ENST00000485578 CDK13Q14004 1512 aaKnown RBP22.93■■□□□ 1.26
PKDCC-207ENST00000485578 LOC105371045A0A1W2PR82 267 aa22.91■■□□□ 1.26
PKDCC-207ENST00000485578 PCF11O94913 1555 aaKnown RBP22.9■■□□□ 1.26
PKDCC-207ENST00000485578 KCNH8Q96L42 1107 aa22.88■■□□□ 1.25
PKDCC-207ENST00000485578 CD109Q6YHK3 1445 aa22.88■■□□□ 1.25
PKDCC-207ENST00000485578 CLIP1P30622 1438 aa22.86■■□□□ 1.25
PKDCC-207ENST00000485578 ATP1B4Q9UN42 357 aaPredicted RBP22.86■■□□□ 1.25
PKDCC-207ENST00000485578 CFAP43Q8NDM7 1665 aa22.86■■□□□ 1.25
PKDCC-207ENST00000485578 HECW1Q76N89 1606 aa22.86■■□□□ 1.25
PKDCC-207ENST00000485578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
PKDCC-207ENST00000485578 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
PKDCC-207ENST00000485578 MAGI3Q5TCQ9 1506 aa22.84■■□□□ 1.25
PKDCC-207ENST00000485578 CEP162Q5TB80 1403 aa22.79■■□□□ 1.24
PKDCC-207ENST00000485578 FMN1Q68DA7 1419 aa22.79■■□□□ 1.24
PKDCC-207ENST00000485578 ABCA9Q8IUA7 1624 aa22.75■■□□□ 1.23
PKDCC-207ENST00000485578 TTC37Q6PGP7 1564 aa22.74■■□□□ 1.23
PKDCC-207ENST00000485578 KIF14Q15058 1648 aa22.72■■□□□ 1.23
PKDCC-207ENST00000485578 CASKIN1Q8WXD9 1431 aa22.68■■□□□ 1.22
PKDCC-207ENST00000485578 ARAP3Q8WWN8 1544 aa22.67■■□□□ 1.22
PKDCC-207ENST00000485578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.67■■□□□ 1.22
PKDCC-207ENST00000485578 PHLDB1Q86UU1 1377 aa22.66■■□□□ 1.22
PKDCC-207ENST00000485578 FYCO1Q9BQS8 1478 aa22.66■■□□□ 1.22
PKDCC-207ENST00000485578 FBXO41Q8TF61 875 aa22.63■■□□□ 1.21
PKDCC-207ENST00000485578 PLEKHD1A6NEE1 506 aa22.62■■□□□ 1.21
PKDCC-207ENST00000485578 MYO5CQ9NQX4 1742 aa22.59■■□□□ 1.21
PKDCC-207ENST00000485578 ARID4BQ4LE39 1312 aaPredicted RBP22.58■■□□□ 1.21
PKDCC-207ENST00000485578 PTPRMP28827 1452 aa22.57■■□□□ 1.2
PKDCC-207ENST00000485578 CCDC18Q5T9S5 1454 aa22.57■■□□□ 1.2
PKDCC-207ENST00000485578 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
PKDCC-207ENST00000485578 NEO1Q92859 1461 aa22.54■■□□□ 1.2
PKDCC-207ENST00000485578 RAPGEF3O95398 923 aa22.53■■□□□ 1.2
PKDCC-207ENST00000485578 ADAMTSL3P82987 1691 aa22.52■■□□□ 1.2
PKDCC-207ENST00000485578 FRMPD1Q5SYB0 1578 aa22.51■■□□□ 1.19
PKDCC-207ENST00000485578 CDC42BPBQ9Y5S2 1711 aa22.51■■□□□ 1.19
PKDCC-207ENST00000485578 CDC42BPAQ5VT25 1732 aa22.5■■□□□ 1.19
PKDCC-207ENST00000485578 FANCAO15360 1455 aa22.47■■□□□ 1.19
PKDCC-207ENST00000485578 CFAP74Q9C0B2 1584 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms