RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 CEP162Q5TB80 1403 aa25.9■■□□□ 1.74
ZNF248-206ENST00000485560 RANGAP1P46060 587 aaPredicted RBP25.83■■□□□ 1.73
ZNF248-206ENST00000485560 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
ZNF248-206ENST00000485560 CLIP1P30622 1438 aa25.8■■□□□ 1.72
ZNF248-206ENST00000485560 NUP160Q12769 1436 aa25.78■■□□□ 1.72
ZNF248-206ENST00000485560 IQGAP2Q13576 1575 aa25.76■■□□□ 1.71
ZNF248-206ENST00000485560 KIAA0586Q9BVV6 1533 aa25.75■■□□□ 1.71
ZNF248-206ENST00000485560 ARHGAP35Q9NRY4 1499 aa25.69■■□□□ 1.7
ZNF248-206ENST00000485560 EFCAB5A4FU69 1503 aa25.63■■□□□ 1.69
ZNF248-206ENST00000485560 SAMD9Q5K651 1589 aa25.63■■□□□ 1.69
ZNF248-206ENST00000485560 UGGT2Q9NYU1 1516 aa25.63■■□□□ 1.69
ZNF248-206ENST00000485560 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
ZNF248-206ENST00000485560 P3H3Q8IVL6 736 aa25.58■■□□□ 1.69
ZNF248-206ENST00000485560 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
ZNF248-206ENST00000485560 JPH4Q96JJ6 628 aa25.55■■□□□ 1.68
ZNF248-206ENST00000485560 FHOD3Q2V2M9 1422 aa25.53■■□□□ 1.68
ZNF248-206ENST00000485560 DISP1Q96F81 1524 aa25.52■■□□□ 1.68
ZNF248-206ENST00000485560 VPS8Q8N3P4 1428 aa25.51■■□□□ 1.67
ZNF248-206ENST00000485560 KIAA0556O60303 1618 aa25.51■■□□□ 1.67
ZNF248-206ENST00000485560 SHROOM2Q13796 1616 aa25.51■■□□□ 1.67
ZNF248-206ENST00000485560 OSCARQ8IYS5 282 aa25.47■■□□□ 1.67
ZNF248-206ENST00000485560 PRG4Q92954 1404 aaPredicted RBP25.43■■□□□ 1.66
ZNF248-206ENST00000485560 CARMIL2Q6F5E8 1435 aa25.43■■□□□ 1.66
ZNF248-206ENST00000485560 FMN1Q68DA7 1419 aa25.38■■□□□ 1.65
ZNF248-206ENST00000485560 ERCC6L2Q5T890 1561 aa25.36■■□□□ 1.65
ZNF248-206ENST00000485560 PCF11O94913 1555 aaKnown RBP25.36■■□□□ 1.65
ZNF248-206ENST00000485560 TTBK1Q5TCY1 1321 aaPredicted RBP25.32■■□□□ 1.64
ZNF248-206ENST00000485560 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
ZNF248-206ENST00000485560 CASKIN1Q8WXD9 1431 aa25.3■■□□□ 1.64
ZNF248-206ENST00000485560 FYCO1Q9BQS8 1478 aa25.28■■□□□ 1.64
ZNF248-206ENST00000485560 ATP1B4Q9UN42 357 aaPredicted RBP25.24■■□□□ 1.63
ZNF248-206ENST00000485560 LRRIQ1Q96JM4 1722 aa25.23■■□□□ 1.63
ZNF248-206ENST00000485560 PTPRGP23470 1445 aa25.22■■□□□ 1.63
ZNF248-206ENST00000485560 RAPGEF6Q8TEU7 1601 aa25.22■■□□□ 1.63
ZNF248-206ENST00000485560 APLP2Q06481 763 aa25.21■■□□□ 1.63
ZNF248-206ENST00000485560 PPARGC1BQ86YN6 1023 aaKnown RBP25.21■■□□□ 1.63
ZNF248-206ENST00000485560 HECW1Q76N89 1606 aa25.2■■□□□ 1.62
ZNF248-206ENST00000485560 PLB1Q6P1J6 1458 aa25.19■■□□□ 1.62
ZNF248-206ENST00000485560 ABCA8O94911 1581 aa25.17■■□□□ 1.62
ZNF248-206ENST00000485560 TIAM1Q13009 1591 aa25.17■■□□□ 1.62
ZNF248-206ENST00000485560 CFAP43Q8NDM7 1665 aa25.16■■□□□ 1.62
ZNF248-206ENST00000485560 MAP3K1Q13233 1512 aa25.14■■□□□ 1.62
ZNF248-206ENST00000485560 NUP153P49790 1475 aaKnown RBP25.12■■□□□ 1.61
ZNF248-206ENST00000485560 EPRSP07814 1512 aaKnown RBP25.1■■□□□ 1.61
ZNF248-206ENST00000485560 KANK4Q5T7N3 995 aaPredicted RBP25.09■■□□□ 1.61
ZNF248-206ENST00000485560 CCDC18Q5T9S5 1454 aa25.08■■□□□ 1.61
ZNF248-206ENST00000485560 ARHGEF11O15085 1522 aa25.08■■□□□ 1.61
ZNF248-206ENST00000485560 UACAQ9BZF9 1416 aa25.08■■□□□ 1.61
ZNF248-206ENST00000485560 ARID3CA6NKF2 412 aa25.07■■□□□ 1.6
ZNF248-206ENST00000485560 CDK13Q14004 1512 aaKnown RBP25.07■■□□□ 1.6
ZNF248-206ENST00000485560 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
ZNF248-206ENST00000485560 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
ZNF248-206ENST00000485560 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
ZNF248-206ENST00000485560 LRRC9Q6ZRR7 1453 aa25.03■■□□□ 1.6
ZNF248-206ENST00000485560 ABCC2Q92887 1545 aa25.03■■□□□ 1.6
ZNF248-206ENST00000485560 UHRF1BP1LA0JNW5 1464 aa24.98■■□□□ 1.59
ZNF248-206ENST00000485560 ATP10BO94823 1461 aa24.98■■□□□ 1.59
ZNF248-206ENST00000485560 MAGI3Q5TCQ9 1506 aa24.97■■□□□ 1.59
ZNF248-206ENST00000485560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.96■■□□□ 1.59
ZNF248-206ENST00000485560 HNRNPUL2Q1KMD3 747 aaKnown RBP24.96■■□□□ 1.59
ZNF248-206ENST00000485560 ADCY10Q96PN6 1610 aa24.96■■□□□ 1.59
ZNF248-206ENST00000485560 MTUS2Q5JR59 1369 aa24.94■■□□□ 1.58
ZNF248-206ENST00000485560 EHBP1L1Q8N3D4 1523 aa24.92■■□□□ 1.58
ZNF248-206ENST00000485560 ZCCHC11Q5TAX3 1644 aaKnown RBP24.9■■□□□ 1.58
ZNF248-206ENST00000485560 KDM5BQ9UGL1 1544 aa24.89■■□□□ 1.57
ZNF248-206ENST00000485560 CDK11AQ9UQ88 783 aaPredicted RBP24.87■■□□□ 1.57
ZNF248-206ENST00000485560 SUPT6HQ7KZ85 1726 aaKnown RBP24.86■■□□□ 1.57
ZNF248-206ENST00000485560 TRIM26Q12899 539 aaPredicted RBP24.84■■□□□ 1.57
ZNF248-206ENST00000485560 CYB5RLQ6IPT4 315 aa24.83■■□□□ 1.57
ZNF248-206ENST00000485560 TROQ12816 1431 aaPredicted RBP24.83■■□□□ 1.56
ZNF248-206ENST00000485560 PLEKHD1A6NEE1 506 aa24.81■■□□□ 1.56
ZNF248-206ENST00000485560 NCOA2Q15596 1464 aa24.8■■□□□ 1.56
ZNF248-206ENST00000485560 PHLDB1Q86UU1 1377 aa24.78■■□□□ 1.56
ZNF248-206ENST00000485560 KIF14Q15058 1648 aa24.77■■□□□ 1.56
ZNF248-206ENST00000485560 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
ZNF248-206ENST00000485560 NPM1P06748 294 aaKnown RBP eCLIP24.71■■□□□ 1.55
ZNF248-206ENST00000485560 RRBP1Q9P2E9 1410 aaKnown RBP24.69■■□□□ 1.54
ZNF248-206ENST00000485560 MYOM3Q5VTT5 1437 aa24.67■■□□□ 1.54
ZNF248-206ENST00000485560 ABCC10Q5T3U5 1492 aa24.66■■□□□ 1.54
ZNF248-206ENST00000485560 WDR7Q9Y4E6 1490 aa24.66■■□□□ 1.54
ZNF248-206ENST00000485560 ASXL2Q76L83 1435 aa24.65■■□□□ 1.54
ZNF248-206ENST00000485560 KCNH8Q96L42 1107 aa24.64■■□□□ 1.53
ZNF248-206ENST00000485560 FGD6Q6ZV73 1430 aa24.63■■□□□ 1.53
ZNF248-206ENST00000485560 CCNB3Q8WWL7 1395 aa24.63■■□□□ 1.53
ZNF248-206ENST00000485560 CDC42BPAQ5VT25 1732 aa24.62■■□□□ 1.53
ZNF248-206ENST00000485560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.61■■□□□ 1.53
ZNF248-206ENST00000485560 ITSN2Q9NZM3 1697 aa24.61■■□□□ 1.53
ZNF248-206ENST00000485560 TTC37Q6PGP7 1564 aa24.6■■□□□ 1.53
ZNF248-206ENST00000485560 GPATCH8Q9UKJ3 1502 aaKnown RBP24.59■■□□□ 1.53
ZNF248-206ENST00000485560 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
ZNF248-206ENST00000485560 PTPN23Q9H3S7 1636 aa24.57■■□□□ 1.52
ZNF248-206ENST00000485560 MIA2Q96PC5 1412 aa24.56■■□□□ 1.52
ZNF248-206ENST00000485560 MYO5CQ9NQX4 1742 aa24.54■■□□□ 1.52
ZNF248-206ENST00000485560 CDC42BPBQ9Y5S2 1711 aa24.54■■□□□ 1.52
ZNF248-206ENST00000485560 FAM50AQ14320 339 aaKnown RBP24.53■■□□□ 1.52
ZNF248-206ENST00000485560 PREX2Q70Z35 1606 aa24.53■■□□□ 1.52
ZNF248-206ENST00000485560 ABCA9Q8IUA7 1624 aa24.51■■□□□ 1.51
ZNF248-206ENST00000485560 TCOF1Q13428 1488 aaKnown RBP24.5■■□□□ 1.51
ZNF248-206ENST00000485560 CFDP1Q9UEE9 299 aaPredicted RBP24.5■■□□□ 1.51
ZNF248-206ENST00000485560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms