RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 ERCC6L2Q5T890 1561 aa35.78■■■■□ 3.32
NECAB3-211ENST00000485399 FHAD1B1AJZ9 1412 aa35.76■■■■□ 3.31
NECAB3-211ENST00000485399 CUL7Q14999 1698 aa35.76■■■■□ 3.31
NECAB3-211ENST00000485399 CARMIL1Q5VZK9 1371 aa35.7■■■■□ 3.31
NECAB3-211ENST00000485399 SHROOM2Q13796 1616 aa35.69■■■■□ 3.3
NECAB3-211ENST00000485399 PRXQ9BXM0 1461 aa35.68■■■■□ 3.3
NECAB3-211ENST00000485399 KIF21BO75037 1637 aa35.64■■■■□ 3.3
NECAB3-211ENST00000485399 RAPGEF2Q9Y4G8 1499 aa35.6■■■■□ 3.29
NECAB3-211ENST00000485399 GOLGA3Q08378 1498 aa35.51■■■■□ 3.27
NECAB3-211ENST00000485399 EHMT2Q96KQ7 1210 aa35.44■■■■□ 3.26
NECAB3-211ENST00000485399 LOC105371045A0A1W2PR82 267 aa35.41■■■■□ 3.26
NECAB3-211ENST00000485399 PRG4Q92954 1404 aaPredicted RBP35.41■■■■□ 3.26
NECAB3-211ENST00000485399 JPH4Q96JJ6 628 aa35.37■■■■□ 3.25
NECAB3-211ENST00000485399 UBTFP17480 764 aaKnown RBP35.36■■■■□ 3.25
NECAB3-211ENST00000485399 TNIKQ9UKE5 1360 aa35.24■■■■□ 3.23
NECAB3-211ENST00000485399 KIF13AQ9H1H9 1805 aa35.24■■■■□ 3.23
NECAB3-211ENST00000485399 CTTNBP2Q8WZ74 1663 aa35.22■■■■□ 3.23
NECAB3-211ENST00000485399 KIAA0586Q9BVV6 1533 aa35.17■■■■□ 3.22
NECAB3-211ENST00000485399 ADCY10Q96PN6 1610 aa35.09■■■■□ 3.21
NECAB3-211ENST00000485399 IQGAP2Q13576 1575 aa35.07■■■■□ 3.2
NECAB3-211ENST00000485399 MAPKBP1O60336 1514 aa35.04■■■■□ 3.2
NECAB3-211ENST00000485399 ABCC10Q5T3U5 1492 aa35.01■■■■□ 3.2
NECAB3-211ENST00000485399 DIP2BQ9P265 1576 aa34.95■■■■□ 3.19
NECAB3-211ENST00000485399 CEP162Q5TB80 1403 aa34.95■■■■□ 3.18
NECAB3-211ENST00000485399 NPM1P06748 294 aaKnown RBP eCLIP34.93■■■■□ 3.18
NECAB3-211ENST00000485399 AEBP2Q6ZN18 517 aaPredicted RBP34.92■■■■□ 3.18
NECAB3-211ENST00000485399 RANGAP1P46060 587 aaPredicted RBP34.91■■■■□ 3.18
NECAB3-211ENST00000485399 FAM69CQ0P6D2 419 aa34.9■■■■□ 3.18
NECAB3-211ENST00000485399 UGGT2Q9NYU1 1516 aa34.9■■■■□ 3.18
NECAB3-211ENST00000485399 CLIP1P30622 1438 aa34.89■■■■□ 3.18
NECAB3-211ENST00000485399 EFCAB5A4FU69 1503 aa34.83■■■■□ 3.17
NECAB3-211ENST00000485399 PTPRGP23470 1445 aa34.83■■■■□ 3.17
NECAB3-211ENST00000485399 SAMD9Q5K651 1589 aa34.79■■■■□ 3.16
NECAB3-211ENST00000485399 CARMIL2Q6F5E8 1435 aa34.77■■■■□ 3.16
NECAB3-211ENST00000485399 ARHGAP35Q9NRY4 1499 aa34.77■■■■□ 3.16
NECAB3-211ENST00000485399 DISP1Q96F81 1524 aa34.73■■■■□ 3.15
NECAB3-211ENST00000485399 KIAA0556O60303 1618 aa34.71■■■■□ 3.15
NECAB3-211ENST00000485399 ABCC2Q92887 1545 aa34.7■■■■□ 3.15
NECAB3-211ENST00000485399 P3H3Q8IVL6 736 aa34.68■■■■□ 3.14
NECAB3-211ENST00000485399 TSPOAP1O95153 1857 aa34.67■■■■□ 3.14
NECAB3-211ENST00000485399 TTBK1Q5TCY1 1321 aaPredicted RBP34.67■■■■□ 3.14
NECAB3-211ENST00000485399 UHRF1BP1LA0JNW5 1464 aa34.64■■■■□ 3.14
NECAB3-211ENST00000485399 KDM6BO15054 1643 aa34.63■■■■□ 3.13
NECAB3-211ENST00000485399 FHOD3Q2V2M9 1422 aa34.62■■■■□ 3.13
NECAB3-211ENST00000485399 ASXL2Q76L83 1435 aa34.58■■■■□ 3.13
NECAB3-211ENST00000485399 UACAQ9BZF9 1416 aa34.58■■■■□ 3.13
NECAB3-211ENST00000485399 PLB1Q6P1J6 1458 aa34.55■■■■□ 3.12
NECAB3-211ENST00000485399 GLI2P10070 1586 aa34.53■■■■□ 3.12
NECAB3-211ENST00000485399 PPRC1Q5VV67 1664 aaKnown RBP34.52■■■■□ 3.12
NECAB3-211ENST00000485399 FMN1Q68DA7 1419 aa34.51■■■■□ 3.11
NECAB3-211ENST00000485399 KDM5BQ9UGL1 1544 aa34.5■■■■□ 3.11
NECAB3-211ENST00000485399 VPS8Q8N3P4 1428 aa34.47■■■■□ 3.11
NECAB3-211ENST00000485399 ZCCHC11Q5TAX3 1644 aaKnown RBP34.43■■■■□ 3.1
NECAB3-211ENST00000485399 EPRSP07814 1512 aaKnown RBP34.39■■■■□ 3.1
NECAB3-211ENST00000485399 MAP3K4Q9Y6R4 1608 aa34.36■■■■□ 3.09
NECAB3-211ENST00000485399 CASKIN1Q8WXD9 1431 aa34.32■■■■□ 3.09
NECAB3-211ENST00000485399 KDM4FA0A1W2PPD8 638 aa34.32■■■■□ 3.08
NECAB3-211ENST00000485399 PCF11O94913 1555 aaKnown RBP34.3■■■■□ 3.08
NECAB3-211ENST00000485399 FYCO1Q9BQS8 1478 aa34.29■■■■□ 3.08
NECAB3-211ENST00000485399 RAPGEF6Q8TEU7 1601 aa34.29■■■■□ 3.08
NECAB3-211ENST00000485399 ABCA8O94911 1581 aa34.27■■■■□ 3.08
NECAB3-211ENST00000485399 COL17A1Q9UMD9 1497 aaPredicted RBP34.25■■■■□ 3.07
NECAB3-211ENST00000485399 WDR7Q9Y4E6 1490 aa34.23■■■■□ 3.07
NECAB3-211ENST00000485399 HECW1Q76N89 1606 aa34.23■■■■□ 3.07
NECAB3-211ENST00000485399 ATP1B4Q9UN42 357 aaPredicted RBP34.23■■■■□ 3.07
NECAB3-211ENST00000485399 TEX14Q8IWB6 1497 aa34.19■■■■□ 3.06
NECAB3-211ENST00000485399 APLP2Q06481 763 aa34.14■■■■□ 3.06
NECAB3-211ENST00000485399 NUP153P49790 1475 aaKnown RBP34.14■■■■□ 3.06
NECAB3-211ENST00000485399 CCDC18Q5T9S5 1454 aa34.1■■■■□ 3.05
NECAB3-211ENST00000485399 LRRIQ1Q96JM4 1722 aa34.09■■■■□ 3.05
NECAB3-211ENST00000485399 MAP3K1Q13233 1512 aa34.07■■■■□ 3.05
NECAB3-211ENST00000485399 CFAP43Q8NDM7 1665 aa34.07■■■■□ 3.04
NECAB3-211ENST00000485399 MAGI3Q5TCQ9 1506 aa34.03■■■■□ 3.04
NECAB3-211ENST00000485399 ADGRL1O94910 1474 aa34.03■■■■□ 3.04
NECAB3-211ENST00000485399 TIAM1Q13009 1591 aa34.02■■■■□ 3.04
NECAB3-211ENST00000485399 ATP10BO94823 1461 aa34.01■■■■□ 3.03
NECAB3-211ENST00000485399 CD109Q6YHK3 1445 aa34.01■■■■□ 3.03
NECAB3-211ENST00000485399 ARID3CA6NKF2 412 aa34■■■■□ 3.03
NECAB3-211ENST00000485399 CDK13Q14004 1512 aaKnown RBP34■■■■□ 3.03
NECAB3-211ENST00000485399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.98■■■■□ 3.03
NECAB3-211ENST00000485399 HNRNPUL2Q1KMD3 747 aaKnown RBP33.98■■■■□ 3.03
NECAB3-211ENST00000485399 KCNH8Q96L42 1107 aa33.97■■■■□ 3.03
NECAB3-211ENST00000485399 CDK11AQ9UQ88 783 aaPredicted RBP33.93■■■■□ 3.02
NECAB3-211ENST00000485399 LRRC9Q6ZRR7 1453 aa33.87■■■■□ 3.01
NECAB3-211ENST00000485399 KANK4Q5T7N3 995 aaPredicted RBP33.85■■■■□ 3.01
NECAB3-211ENST00000485399 MTUS2Q5JR59 1369 aa33.84■■■■□ 3.01
NECAB3-211ENST00000485399 PLEKHD1A6NEE1 506 aa33.84■■■■□ 3.01
NECAB3-211ENST00000485399 ABCA9Q8IUA7 1624 aa33.8■■■■□ 3
NECAB3-211ENST00000485399 EHBP1L1Q8N3D4 1523 aa33.8■■■■□ 3
NECAB3-211ENST00000485399 PPARGC1BQ86YN6 1023 aaKnown RBP33.78■■■■□ 3
NECAB3-211ENST00000485399 ARAP3Q8WWN8 1544 aa33.77■■■■□ 3
NECAB3-211ENST00000485399 TROQ12816 1431 aaPredicted RBP33.77■■■■□ 3
NECAB3-211ENST00000485399 SUPT6HQ7KZ85 1726 aaKnown RBP33.69■■■□□ 2.98
NECAB3-211ENST00000485399 KIF14Q15058 1648 aa33.63■■■□□ 2.97
NECAB3-211ENST00000485399 PHLDB1Q86UU1 1377 aa33.63■■■□□ 2.97
NECAB3-211ENST00000485399 HECW2Q9P2P5 1572 aa33.61■■■□□ 2.97
NECAB3-211ENST00000485399 NEO1Q92859 1461 aa33.6■■■□□ 2.97
NECAB3-211ENST00000485399 NCOA2Q15596 1464 aa33.59■■■□□ 2.97
NECAB3-211ENST00000485399 FRMPD1Q5SYB0 1578 aa33.55■■■□□ 2.96
NECAB3-211ENST00000485399 RAPGEF3O95398 923 aa33.51■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms