RNA–Protein interactions for RNA: ENST00000485249.1

KDM4A-205, Transcript of lysine demethylase 4A, humanhuman

TSL 3

Gene KDM4A, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-205ENST00000485249 KLHL34Q8N239 644 aa10.64□□□□□ -0.71
KDM4A-205ENST00000485249 MIER1Q8N108 512 aa10.63□□□□□ -0.71
KDM4A-205ENST00000485249 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
KDM4A-205ENST00000485249 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
KDM4A-205ENST00000485249 SLC24A1O60721 1099 aa10.58□□□□□ -0.72
KDM4A-205ENST00000485249 PLEKHG5O94827 1062 aa10.58□□□□□ -0.72
KDM4A-205ENST00000485249 PKD2Q13563 968 aa10.58□□□□□ -0.72
KDM4A-205ENST00000485249 ZBTB47Q9UFB7 747 aaPredicted RBP10.57□□□□□ -0.72
KDM4A-205ENST00000485249 REM2Q8IYK8 340 aaPredicted RBP10.54□□□□□ -0.72
KDM4A-205ENST00000485249 PRDM2Q13029 1718 aa10.52□□□□□ -0.73
KDM4A-205ENST00000485249 NESP48681 1621 aa10.51□□□□□ -0.73
KDM4A-205ENST00000485249 CLEC11AQ9Y240 323 aa10.49□□□□□ -0.73
KDM4A-205ENST00000485249 CFTRP13569 1480 aa10.49□□□□□ -0.73
KDM4A-205ENST00000485249 CADPSQ9ULU8 1353 aa10.46□□□□□ -0.74
KDM4A-205ENST00000485249 LAMC3Q9Y6N6 1575 aa10.45□□□□□ -0.74
KDM4A-205ENST00000485249 ECM2O94769 699 aaPredicted RBP10.45□□□□□ -0.74
KDM4A-205ENST00000485249 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
KDM4A-205ENST00000485249 PITPNM1O00562 1244 aa10.43□□□□□ -0.74
KDM4A-205ENST00000485249 KIF21AQ7Z4S6 1674 aa10.43□□□□□ -0.74
KDM4A-205ENST00000485249 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
KDM4A-205ENST00000485249 ABCC8Q09428 1581 aa10.4□□□□□ -0.74
KDM4A-205ENST00000485249 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
KDM4A-205ENST00000485249 MNX1P50219 401 aaPredicted RBP10.37□□□□□ -0.75
KDM4A-205ENST00000485249 TRIM41Q8WV44 630 aa10.37□□□□□ -0.75
KDM4A-205ENST00000485249 FANCD2Q9BXW9 1451 aa10.36□□□□□ -0.75
KDM4A-205ENST00000485249 NUBP1P53384 320 aa10.36□□□□□ -0.75
KDM4A-205ENST00000485249 SYNJ1O43426 1573 aa10.35□□□□□ -0.75
KDM4A-205ENST00000485249 RGL2O15211 777 aa10.33□□□□□ -0.76
KDM4A-205ENST00000485249 GSE1Q14687 1217 aa10.33□□□□□ -0.76
KDM4A-205ENST00000485249 CUX1P39880 1505 aa10.32□□□□□ -0.76
KDM4A-205ENST00000485249 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
KDM4A-205ENST00000485249 BIVM-ERCC5R4GMW8 1640 aa10.31□□□□□ -0.76
KDM4A-205ENST00000485249 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
KDM4A-205ENST00000485249 URB2Q14146 1524 aaKnown RBP10.3□□□□□ -0.76
KDM4A-205ENST00000485249 PDS5BQ9NTI5 1447 aa10.3□□□□□ -0.76
KDM4A-205ENST00000485249 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
KDM4A-205ENST00000485249 WRNQ14191 1432 aaPredicted RBP eCLIP10.28□□□□□ -0.76
KDM4A-205ENST00000485249 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
KDM4A-205ENST00000485249 TOP2BQ02880 1626 aa10.28□□□□□ -0.76
KDM4A-205ENST00000485249 DNMBPQ6XZF7 1577 aa10.26□□□□□ -0.77
KDM4A-205ENST00000485249 TOPBP1Q92547 1522 aa10.26□□□□□ -0.77
KDM4A-205ENST00000485249 NPM1P06748 294 aaKnown RBP eCLIP10.25□□□□□ -0.77
KDM4A-205ENST00000485249 MRC2Q9UBG0 1479 aa10.24□□□□□ -0.77
KDM4A-205ENST00000485249 DCAF8Q5TAQ9 597 aa10.24□□□□□ -0.77
KDM4A-205ENST00000485249 RASEFQ8IZ41 740 aa10.24□□□□□ -0.77
KDM4A-205ENST00000485249 WDR62O43379 1518 aa10.23□□□□□ -0.77
KDM4A-205ENST00000485249 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
KDM4A-205ENST00000485249 BBXQ8WY36 941 aaPredicted RBP10.22□□□□□ -0.77
KDM4A-205ENST00000485249 CHADLQ6NUI6 762 aa10.21□□□□□ -0.77
KDM4A-205ENST00000485249 RNF25Q96BH1 459 aaPredicted RBP10.21□□□□□ -0.77
KDM4A-205ENST00000485249 FGD5Q6ZNL6 1462 aa10.21□□□□□ -0.78
KDM4A-205ENST00000485249 WDR97A6NE52 1622 aa10.19□□□□□ -0.78
KDM4A-205ENST00000485249 POLA1P09884 1462 aaPredicted RBP10.19□□□□□ -0.78
KDM4A-205ENST00000485249 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
KDM4A-205ENST00000485249 CUX2O14529 1486 aa10.17□□□□□ -0.78
KDM4A-205ENST00000485249 CHRM1P11229 460 aaPredicted RBP10.17□□□□□ -0.78
KDM4A-205ENST00000485249 FXR2P51116 673 aaKnown RBP eCLIP10.17□□□□□ -0.78
KDM4A-205ENST00000485249 FARP1Q9Y4F1 1045 aaPredicted RBP10.17□□□□□ -0.78
KDM4A-205ENST00000485249 TARBP1Q13395 1621 aaKnown RBP10.17□□□□□ -0.78
KDM4A-205ENST00000485249 CHGAP10645 457 aaKnown RBP10.16□□□□□ -0.78
KDM4A-205ENST00000485249 RAD54L2Q9Y4B4 1467 aa10.16□□□□□ -0.78
KDM4A-205ENST00000485249 RIOK3O14730 519 aaKnown RBP10.15□□□□□ -0.78
KDM4A-205ENST00000485249 PRKAR2AP13861 404 aaKnown RBP10.15□□□□□ -0.78
KDM4A-205ENST00000485249 HS6ST3Q8IZP7 471 aa10.15□□□□□ -0.78
KDM4A-205ENST00000485249 RUSC2Q8N2Y8 1516 aa10.15□□□□□ -0.78
KDM4A-205ENST00000485249 CHRDL2Q6WN34 429 aa10.14□□□□□ -0.79
KDM4A-205ENST00000485249 TAOK2Q9UL54 1235 aa10.14□□□□□ -0.79
KDM4A-205ENST00000485249 SOGA1O94964 1423 aa10.13□□□□□ -0.79
KDM4A-205ENST00000485249 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
KDM4A-205ENST00000485249 ABCA10Q8WWZ4 1543 aa10.1□□□□□ -0.79
KDM4A-205ENST00000485249 ABCA5Q8WWZ7 1642 aa10.09□□□□□ -0.79
KDM4A-205ENST00000485249 VGFO15240 615 aaPredicted RBP10.09□□□□□ -0.79
KDM4A-205ENST00000485249 PYGBP11216 843 aa10.09□□□□□ -0.79
KDM4A-205ENST00000485249 PAXIP1Q6ZW49 1069 aaPredicted RBP10.09□□□□□ -0.79
KDM4A-205ENST00000485249 DNAJC5Q9H3Z4 198 aa10.09□□□□□ -0.79
KDM4A-205ENST00000485249 ZNF608Q9ULD9 1512 aaPredicted RBP10.08□□□□□ -0.8
KDM4A-205ENST00000485249 PIP4P2Q8N4L2 257 aa10.08□□□□□ -0.8
KDM4A-205ENST00000485249 TSPYL2Q9H2G4 693 aaPredicted RBP10.07□□□□□ -0.8
KDM4A-205ENST00000485249 IFT140Q96RY7 1462 aa10.06□□□□□ -0.8
KDM4A-205ENST00000485249 PBRM1Q86U86 1689 aa10.06□□□□□ -0.8
KDM4A-205ENST00000485249 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
KDM4A-205ENST00000485249 SPRYD3Q8NCJ5 442 aa10.05□□□□□ -0.8
KDM4A-205ENST00000485249 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
KDM4A-205ENST00000485249 SGIP1Q9BQI5 828 aa10.05□□□□□ -0.8
KDM4A-205ENST00000485249 TDRD9Q8NDG6 1382 aaKnown RBP10.03□□□□□ -0.8
KDM4A-205ENST00000485249 STK25O00506 426 aa10.02□□□□□ -0.81
KDM4A-205ENST00000485249 FAM9AQ8IZU1 332 aaPredicted RBP10.02□□□□□ -0.81
KDM4A-205ENST00000485249 CCDC61Q9Y6R9 512 aa10.02□□□□□ -0.81
KDM4A-205ENST00000485249 AQRO60306 1485 aaKnown RBP eCLIP10.02□□□□□ -0.81
KDM4A-205ENST00000485249 KIF27Q86VH2 1401 aa10.01□□□□□ -0.81
KDM4A-205ENST00000485249 GAPVD1Q14C86 1478 aa10□□□□□ -0.81
KDM4A-205ENST00000485249 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10□□□□□ -0.81
KDM4A-205ENST00000485249 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
KDM4A-205ENST00000485249 ZNF467Q7Z7K2 595 aaPredicted RBP10□□□□□ -0.81
KDM4A-205ENST00000485249 VSIG10Q8N0Z9 540 aa10□□□□□ -0.81
KDM4A-205ENST00000485249 ZFP91Q96JP5 570 aaPredicted RBP10□□□□□ -0.81
KDM4A-205ENST00000485249 EEA1Q15075 1411 aa9.99□□□□□ -0.81
KDM4A-205ENST00000485249 IGF1RP08069 1367 aa9.98□□□□□ -0.81
KDM4A-205ENST00000485249 NKX1-1Q15270 411 aaPredicted RBP9.97□□□□□ -0.81
KDM4A-205ENST00000485249 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms