RNA–Protein interactions for RNA: ENST00000485192.1

TNFAIP3-205, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-205ENST00000485192 REM2Q8IYK8 340 aaPredicted RBP10.19□□□□□ -0.78
TNFAIP3-205ENST00000485192 STAG3Q9UJ98 1225 aa10.19□□□□□ -0.78
TNFAIP3-205ENST00000485192 NEUROD1Q13562 356 aa10.18□□□□□ -0.78
TNFAIP3-205ENST00000485192 TTBK1Q5TCY1 1321 aaPredicted RBP10.17□□□□□ -0.78
TNFAIP3-205ENST00000485192 TNIKQ9UKE5 1360 aa10.16□□□□□ -0.78
TNFAIP3-205ENST00000485192 GTF3C3Q9Y5Q9 886 aa10.16□□□□□ -0.78
TNFAIP3-205ENST00000485192 CEP162Q5TB80 1403 aa10.14□□□□□ -0.79
TNFAIP3-205ENST00000485192 ZNF316A6NFI3 1004 aaPredicted RBP10.12□□□□□ -0.79
TNFAIP3-205ENST00000485192 KIF21BO75037 1637 aa10.11□□□□□ -0.79
TNFAIP3-205ENST00000485192 GOLGA3Q08378 1498 aa10.11□□□□□ -0.79
TNFAIP3-205ENST00000485192 PIP4P2Q8N4L2 257 aa10.11□□□□□ -0.79
TNFAIP3-205ENST00000485192 SP7Q8TDD2 431 aaPredicted RBP10.11□□□□□ -0.79
TNFAIP3-205ENST00000485192 FAM9AQ8IZU1 332 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-205ENST00000485192 SMARCA4P51532 1647 aa10.09□□□□□ -0.79
TNFAIP3-205ENST00000485192 CECR2Q9BXF3 1484 aa10.09□□□□□ -0.79
TNFAIP3-205ENST00000485192 VASPP50552 380 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-205ENST00000485192 SMARCA2P51531 1590 aa10.07□□□□□ -0.8
TNFAIP3-205ENST00000485192 PITPNM1O00562 1244 aa10.07□□□□□ -0.8
TNFAIP3-205ENST00000485192 SPDYE1Q8NFV5 336 aaPredicted RBP10.07□□□□□ -0.8
TNFAIP3-205ENST00000485192 FXR2P51116 673 aaKnown RBP eCLIP10.06□□□□□ -0.8
TNFAIP3-205ENST00000485192 BAZ1BQ9UIG0 1483 aaKnown RBP10.05□□□□□ -0.8
TNFAIP3-205ENST00000485192 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
TNFAIP3-205ENST00000485192 CEP164Q9UPV0 1460 aa10.04□□□□□ -0.8
TNFAIP3-205ENST00000485192 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
TNFAIP3-205ENST00000485192 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
TNFAIP3-205ENST00000485192 ABCC8Q09428 1581 aa9.98□□□□□ -0.81
TNFAIP3-205ENST00000485192 MIER1Q8N108 512 aa9.98□□□□□ -0.81
TNFAIP3-205ENST00000485192 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
TNFAIP3-205ENST00000485192 PEG3Q9GZU2 1588 aa9.97□□□□□ -0.81
TNFAIP3-205ENST00000485192 CLEC11AQ9Y240 323 aa9.97□□□□□ -0.81
TNFAIP3-205ENST00000485192 VPS8Q8N3P4 1428 aa9.96□□□□□ -0.82
TNFAIP3-205ENST00000485192 HAX1O00165 279 aa9.95□□□□□ -0.82
TNFAIP3-205ENST00000485192 ZBTB47Q9UFB7 747 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP3-205ENST00000485192 PRR29P0C7W0 189 aa9.94□□□□□ -0.82
TNFAIP3-205ENST00000485192 UNC13AQ9UPW8 1703 aa9.93□□□□□ -0.82
TNFAIP3-205ENST00000485192 IFNLR1Q8IU57 520 aaPredicted RBP9.93□□□□□ -0.82
TNFAIP3-205ENST00000485192 KLHL34Q8N239 644 aa9.93□□□□□ -0.82
TNFAIP3-205ENST00000485192 ERICH3Q5RHP9 1530 aa9.91□□□□□ -0.82
TNFAIP3-205ENST00000485192 CLIP1P30622 1438 aa9.9□□□□□ -0.82
TNFAIP3-205ENST00000485192 SOGA1O94964 1423 aa9.89□□□□□ -0.83
TNFAIP3-205ENST00000485192 RTN4Q9NQC3 1192 aaKnown RBP9.88□□□□□ -0.83
TNFAIP3-205ENST00000485192 CUX2O14529 1486 aa9.86□□□□□ -0.83
TNFAIP3-205ENST00000485192 SPOCK2Q92563 424 aa9.86□□□□□ -0.83
TNFAIP3-205ENST00000485192 BIVM-ERCC5R4GMW8 1640 aa9.85□□□□□ -0.83
TNFAIP3-205ENST00000485192 UBTFP17480 764 aaKnown RBP9.84□□□□□ -0.83
TNFAIP3-205ENST00000485192 SYNJ1O43426 1573 aa9.83□□□□□ -0.84
TNFAIP3-205ENST00000485192 YTHDC1Q96MU7 727 aaKnown RBP9.82□□□□□ -0.84
TNFAIP3-205ENST00000485192 TOP2BQ02880 1626 aa9.82□□□□□ -0.84
TNFAIP3-205ENST00000485192 PRKAR2AP13861 404 aaKnown RBP9.81□□□□□ -0.84
TNFAIP3-205ENST00000485192 ANP32EQ9BTT0 268 aa9.78□□□□□ -0.84
TNFAIP3-205ENST00000485192 RRBP1Q9P2E9 1410 aaKnown RBP9.78□□□□□ -0.84
TNFAIP3-205ENST00000485192 CREBZFQ9NS37 354 aa9.77□□□□□ -0.85
TNFAIP3-205ENST00000485192 SUPT16HQ9Y5B9 1047 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-205ENST00000485192 MAP3K1Q13233 1512 aa9.77□□□□□ -0.85
TNFAIP3-205ENST00000485192 RUSC2Q8N2Y8 1516 aa9.77□□□□□ -0.85
TNFAIP3-205ENST00000485192 DHX57Q6P158 1386 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-205ENST00000485192 NPM1P06748 294 aaKnown RBP eCLIP9.75□□□□□ -0.85
TNFAIP3-205ENST00000485192 C19orf67A6NJJ6 358 aa9.74□□□□□ -0.85
TNFAIP3-205ENST00000485192 EVX2Q03828 476 aa9.74□□□□□ -0.85
TNFAIP3-205ENST00000485192 PRDM2Q13029 1718 aa9.73□□□□□ -0.85
TNFAIP3-205ENST00000485192 RAPGEF2Q9Y4G8 1499 aa9.72□□□□□ -0.85
TNFAIP3-205ENST00000485192 PRXQ9BXM0 1461 aa9.71□□□□□ -0.86
TNFAIP3-205ENST00000485192 MYT1LQ9UL68 1186 aa9.7□□□□□ -0.86
TNFAIP3-205ENST00000485192 GSE1Q14687 1217 aa9.69□□□□□ -0.86
TNFAIP3-205ENST00000485192 ARAP1Q96P48 1450 aa9.69□□□□□ -0.86
TNFAIP3-205ENST00000485192 TIMELESSQ9UNS1 1208 aa9.69□□□□□ -0.86
TNFAIP3-205ENST00000485192 CFAP43Q8NDM7 1665 aa9.67□□□□□ -0.86
TNFAIP3-205ENST00000485192 BICRAQ9NZM4 1560 aa9.67□□□□□ -0.86
TNFAIP3-205ENST00000485192 NEFLP07196 543 aa9.67□□□□□ -0.86
TNFAIP3-205ENST00000485192 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
TNFAIP3-205ENST00000485192 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
TNFAIP3-205ENST00000485192 CCNB3Q8WWL7 1395 aa9.65□□□□□ -0.86
TNFAIP3-205ENST00000485192 PKD2Q13563 968 aa9.65□□□□□ -0.86
TNFAIP3-205ENST00000485192 CIZ1Q9ULV3 898 aaPredicted RBP9.65□□□□□ -0.86
TNFAIP3-205ENST00000485192 NUBP1P53384 320 aa9.64□□□□□ -0.87
TNFAIP3-205ENST00000485192 CHADLQ6NUI6 762 aa9.64□□□□□ -0.87
TNFAIP3-205ENST00000485192 FARP1Q9Y4F1 1045 aaPredicted RBP9.64□□□□□ -0.87
TNFAIP3-205ENST00000485192 ATAD2BQ9ULI0 1458 aa9.64□□□□□ -0.87
TNFAIP3-205ENST00000485192 TIAM1Q13009 1591 aa9.63□□□□□ -0.87
TNFAIP3-205ENST00000485192 HMGXB3Q12766 1538 aa9.63□□□□□ -0.87
TNFAIP3-205ENST00000485192 FAM212AQ96EL1 285 aa9.63□□□□□ -0.87
TNFAIP3-205ENST00000485192 CCER2I3L3R5 266 aa9.62□□□□□ -0.87
TNFAIP3-205ENST00000485192 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
TNFAIP3-205ENST00000485192 DCAF8Q5TAQ9 597 aa9.62□□□□□ -0.87
TNFAIP3-205ENST00000485192 KIF27Q86VH2 1401 aa9.62□□□□□ -0.87
TNFAIP3-205ENST00000485192 MAPKBP1O60336 1514 aa9.61□□□□□ -0.87
TNFAIP3-205ENST00000485192 GABBR2O75899 941 aa9.59□□□□□ -0.87
TNFAIP3-205ENST00000485192 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.59□□□□□ -0.87
TNFAIP3-205ENST00000485192 CLCN6P51797 869 aa9.58□□□□□ -0.88
TNFAIP3-205ENST00000485192 ERICH6BQ5W0A0 696 aa9.58□□□□□ -0.88
TNFAIP3-205ENST00000485192 BCL11AQ9H165 835 aa9.58□□□□□ -0.88
TNFAIP3-205ENST00000485192 FHAD1B1AJZ9 1412 aa9.57□□□□□ -0.88
TNFAIP3-205ENST00000485192 SETD5Q9C0A6 1442 aa9.56□□□□□ -0.88
TNFAIP3-205ENST00000485192 ARHGAP35Q9NRY4 1499 aa9.55□□□□□ -0.88
TNFAIP3-205ENST00000485192 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-205ENST00000485192 RASEFQ8IZ41 740 aa9.54□□□□□ -0.88
TNFAIP3-205ENST00000485192 EFCAB5A4FU69 1503 aa9.54□□□□□ -0.88
TNFAIP3-205ENST00000485192 FANCIQ9NVI1 1328 aa9.54□□□□□ -0.88
TNFAIP3-205ENST00000485192 RAB3GAP2Q9H2M9 1393 aa9.53□□□□□ -0.88
TNFAIP3-205ENST00000485192 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms