RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
EXOSC1-210ENST00000485122 NUP160Q12769 1436 aa19.59■□□□□ 0.73
EXOSC1-210ENST00000485122 ABCA5Q8WWZ7 1642 aa19.56■□□□□ 0.72
EXOSC1-210ENST00000485122 CUX1P39880 1505 aa19.55■□□□□ 0.72
EXOSC1-210ENST00000485122 ADCY10Q96PN6 1610 aa19.54■□□□□ 0.72
EXOSC1-210ENST00000485122 ADAMTS12P58397 1594 aa19.51■□□□□ 0.71
EXOSC1-210ENST00000485122 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
EXOSC1-210ENST00000485122 PPRC1Q5VV67 1664 aaKnown RBP19.49■□□□□ 0.71
EXOSC1-210ENST00000485122 DISP3Q9P2K9 1392 aa19.48■□□□□ 0.71
EXOSC1-210ENST00000485122 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
EXOSC1-210ENST00000485122 COL17A1Q9UMD9 1497 aaPredicted RBP19.41■□□□□ 0.7
EXOSC1-210ENST00000485122 ABCA10Q8WWZ4 1543 aa19.4■□□□□ 0.7
EXOSC1-210ENST00000485122 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
EXOSC1-210ENST00000485122 JPH4Q96JJ6 628 aa19.31■□□□□ 0.68
EXOSC1-210ENST00000485122 SPATA31D1Q6ZQQ2 1576 aa19.28■□□□□ 0.68
EXOSC1-210ENST00000485122 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
EXOSC1-210ENST00000485122 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
EXOSC1-210ENST00000485122 GLI2P10070 1586 aa19.23■□□□□ 0.67
EXOSC1-210ENST00000485122 KIF21BO75037 1637 aa19.2■□□□□ 0.66
EXOSC1-210ENST00000485122 ASXL2Q76L83 1435 aa19.17■□□□□ 0.66
EXOSC1-210ENST00000485122 MAP3K4Q9Y6R4 1608 aa19.17■□□□□ 0.66
EXOSC1-210ENST00000485122 PCF11O94913 1555 aaKnown RBP19.14■□□□□ 0.65
EXOSC1-210ENST00000485122 CUL7Q14999 1698 aa19.14■□□□□ 0.65
EXOSC1-210ENST00000485122 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
EXOSC1-210ENST00000485122 CERKQ8TCT0 537 aa19.1■□□□□ 0.65
EXOSC1-210ENST00000485122 PTPRMP28827 1452 aa19.09■□□□□ 0.65
EXOSC1-210ENST00000485122 PLB1Q6P1J6 1458 aa19.09■□□□□ 0.65
EXOSC1-210ENST00000485122 ABCC2Q92887 1545 aa19.09■□□□□ 0.65
EXOSC1-210ENST00000485122 TEX14Q8IWB6 1497 aa19.09■□□□□ 0.65
EXOSC1-210ENST00000485122 TTBK1Q5TCY1 1321 aaPredicted RBP19.05■□□□□ 0.64
EXOSC1-210ENST00000485122 EPRSP07814 1512 aaKnown RBP19.05■□□□□ 0.64
EXOSC1-210ENST00000485122 ADAMTSL3P82987 1691 aa19.03■□□□□ 0.64
EXOSC1-210ENST00000485122 WRNQ14191 1432 aaPredicted RBP eCLIP19.01■□□□□ 0.63
EXOSC1-210ENST00000485122 PTPRGP23470 1445 aa18.98■□□□□ 0.63
EXOSC1-210ENST00000485122 HSPA2P54652 639 aa18.97■□□□□ 0.63
EXOSC1-210ENST00000485122 MADDQ8WXG6 1647 aa18.93■□□□□ 0.62
EXOSC1-210ENST00000485122 KIAA0586Q9BVV6 1533 aa18.92■□□□□ 0.62
EXOSC1-210ENST00000485122 ZCCHC11Q5TAX3 1644 aaKnown RBP18.89■□□□□ 0.61
EXOSC1-210ENST00000485122 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.61
EXOSC1-210ENST00000485122 BCORL1Q5H9F3 1711 aa18.86■□□□□ 0.61
EXOSC1-210ENST00000485122 UHRF1BP1LA0JNW5 1464 aa18.86■□□□□ 0.61
EXOSC1-210ENST00000485122 RIMS1Q86UR5 1692 aaKnown RBP18.85■□□□□ 0.61
EXOSC1-210ENST00000485122 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.61
EXOSC1-210ENST00000485122 KDM5BQ9UGL1 1544 aa18.83■□□□□ 0.6
EXOSC1-210ENST00000485122 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
EXOSC1-210ENST00000485122 MAGI3Q5TCQ9 1506 aa18.79■□□□□ 0.6
EXOSC1-210ENST00000485122 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
EXOSC1-210ENST00000485122 WDR7Q9Y4E6 1490 aa18.77■□□□□ 0.59
EXOSC1-210ENST00000485122 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
EXOSC1-210ENST00000485122 CD109Q6YHK3 1445 aa18.75■□□□□ 0.59
EXOSC1-210ENST00000485122 CARMIL2Q6F5E8 1435 aa18.73■□□□□ 0.59
EXOSC1-210ENST00000485122 ARAP3Q8WWN8 1544 aa18.68■□□□□ 0.58
EXOSC1-210ENST00000485122 ARID4BQ4LE39 1312 aaPredicted RBP18.67■□□□□ 0.58
EXOSC1-210ENST00000485122 DISP1Q96F81 1524 aa18.64■□□□□ 0.57
EXOSC1-210ENST00000485122 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
EXOSC1-210ENST00000485122 IQGAP2Q13576 1575 aa18.62■□□□□ 0.57
EXOSC1-210ENST00000485122 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
EXOSC1-210ENST00000485122 FRMPD1Q5SYB0 1578 aa18.6■□□□□ 0.57
EXOSC1-210ENST00000485122 RAPGEF3O95398 923 aa18.58■□□□□ 0.56
EXOSC1-210ENST00000485122 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
EXOSC1-210ENST00000485122 SIGLEC1Q9BZZ2 1709 aa18.54■□□□□ 0.56
EXOSC1-210ENST00000485122 IGF1RP08069 1367 aa18.54■□□□□ 0.56
EXOSC1-210ENST00000485122 ARHGEF40Q8TER5 1519 aa18.54■□□□□ 0.56
EXOSC1-210ENST00000485122 PREX1Q8TCU6 1659 aa18.54■□□□□ 0.56
EXOSC1-210ENST00000485122 LTBP4Q8N2S1 1624 aa18.53■□□□□ 0.56
EXOSC1-210ENST00000485122 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
EXOSC1-210ENST00000485122 FER1L4A9Z1Z3 1794 aa18.51■□□□□ 0.55
EXOSC1-210ENST00000485122 KIAA0556O60303 1618 aa18.51■□□□□ 0.55
EXOSC1-210ENST00000485122 TTC37Q6PGP7 1564 aa18.48■□□□□ 0.55
EXOSC1-210ENST00000485122 IQSEC2Q5JU85 1478 aa18.46■□□□□ 0.54
EXOSC1-210ENST00000485122 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
EXOSC1-210ENST00000485122 UGGT2Q9NYU1 1516 aa18.42■□□□□ 0.54
EXOSC1-210ENST00000485122 ABCA9Q8IUA7 1624 aa18.41■□□□□ 0.54
EXOSC1-210ENST00000485122 FANCAO15360 1455 aa18.39■□□□□ 0.54
EXOSC1-210ENST00000485122 ABCA8O94911 1581 aa18.39■□□□□ 0.53
EXOSC1-210ENST00000485122 PTPRTO14522 1441 aa18.39■□□□□ 0.53
EXOSC1-210ENST00000485122 MLECQ14165 292 aa18.38■□□□□ 0.53
EXOSC1-210ENST00000485122 CARMIL1Q5VZK9 1371 aa18.38■□□□□ 0.53
EXOSC1-210ENST00000485122 RICTORQ6R327 1708 aa18.37■□□□□ 0.53
EXOSC1-210ENST00000485122 PHLDB1Q86UU1 1377 aa18.37■□□□□ 0.53
EXOSC1-210ENST00000485122 POGZQ7Z3K3 1410 aa18.37■□□□□ 0.53
EXOSC1-210ENST00000485122 NEO1Q92859 1461 aa18.37■□□□□ 0.53
EXOSC1-210ENST00000485122 KIF27Q86VH2 1401 aa18.36■□□□□ 0.53
EXOSC1-210ENST00000485122 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
EXOSC1-210ENST00000485122 CEBPAP49715 358 aaPredicted RBP18.34■□□□□ 0.53
EXOSC1-210ENST00000485122 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
EXOSC1-210ENST00000485122 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
EXOSC1-210ENST00000485122 AKNAQ7Z591 1439 aa18.3■□□□□ 0.52
EXOSC1-210ENST00000485122 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
EXOSC1-210ENST00000485122 ZFYVE16Q7Z3T8 1539 aa18.28■□□□□ 0.52
EXOSC1-210ENST00000485122 ARHGEF12Q9NZN5 1544 aa18.28■□□□□ 0.52
EXOSC1-210ENST00000485122 HSPA1LP34931 641 aa18.27■□□□□ 0.52
EXOSC1-210ENST00000485122 DENND4BO75064 1496 aaPredicted RBP18.26■□□□□ 0.51
EXOSC1-210ENST00000485122 ZMYM4Q5VZL5 1548 aa18.24■□□□□ 0.51
EXOSC1-210ENST00000485122 EFCAB5A4FU69 1503 aa18.23■□□□□ 0.51
EXOSC1-210ENST00000485122 ZNF335Q9H4Z2 1342 aaPredicted RBP18.22■□□□□ 0.51
EXOSC1-210ENST00000485122 FHOD3Q2V2M9 1422 aa18.21■□□□□ 0.51
EXOSC1-210ENST00000485122 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
EXOSC1-210ENST00000485122 ATP10BO94823 1461 aa18.2■□□□□ 0.5
EXOSC1-210ENST00000485122 NCOA1Q15788 1441 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms