RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 GOLGA3Q08378 1498 aa33.34■■■□□ 2.93
PKD1-218ENST00000485120 JPH4Q96JJ6 628 aa33.34■■■□□ 2.93
PKD1-218ENST00000485120 UBTFP17480 764 aaKnown RBP33.27■■■□□ 2.92
PKD1-218ENST00000485120 IQGAP2Q13576 1575 aa33.2■■■□□ 2.91
PKD1-218ENST00000485120 SHROOM2Q13796 1616 aa33.16■■■□□ 2.9
PKD1-218ENST00000485120 EHMT2Q96KQ7 1210 aa33.14■■■□□ 2.9
PKD1-218ENST00000485120 PRG4Q92954 1404 aaPredicted RBP33.13■■■□□ 2.89
PKD1-218ENST00000485120 UGGT2Q9NYU1 1516 aa33.11■■■□□ 2.89
PKD1-218ENST00000485120 TNIKQ9UKE5 1360 aa33.09■■■□□ 2.89
PKD1-218ENST00000485120 CTTNBP2Q8WZ74 1663 aa33.09■■■□□ 2.89
PKD1-218ENST00000485120 CARMIL2Q6F5E8 1435 aa33.09■■■□□ 2.89
PKD1-218ENST00000485120 ARHGEF11O15085 1522 aa33.07■■■□□ 2.89
PKD1-218ENST00000485120 LOC105371045A0A1W2PR82 267 aa33.01■■■□□ 2.87
PKD1-218ENST00000485120 DISP1Q96F81 1524 aa32.96■■■□□ 2.87
PKD1-218ENST00000485120 RIMBP3CA6NJZ7 1639 aa32.94■■■□□ 2.86
PKD1-218ENST00000485120 RIMBP3BA6NNM3 1639 aa32.94■■■□□ 2.86
PKD1-218ENST00000485120 RIMBP3Q9UFD9 1639 aa32.94■■■□□ 2.86
PKD1-218ENST00000485120 ERCC6L2Q5T890 1561 aa32.91■■■□□ 2.86
PKD1-218ENST00000485120 PTPRGP23470 1445 aa32.86■■■□□ 2.85
PKD1-218ENST00000485120 RANGAP1P46060 587 aaPredicted RBP32.86■■■□□ 2.85
PKD1-218ENST00000485120 EFCAB5A4FU69 1503 aa32.86■■■□□ 2.85
PKD1-218ENST00000485120 ARAP1Q96P48 1450 aa32.85■■■□□ 2.85
PKD1-218ENST00000485120 KIAA0556O60303 1618 aa32.84■■■□□ 2.85
PKD1-218ENST00000485120 CYB5RLQ6IPT4 315 aa32.84■■■□□ 2.85
PKD1-218ENST00000485120 SAMD9Q5K651 1589 aa32.82■■■□□ 2.84
PKD1-218ENST00000485120 P3H3Q8IVL6 736 aa32.79■■■□□ 2.84
PKD1-218ENST00000485120 CLIP1P30622 1438 aa32.76■■■□□ 2.83
PKD1-218ENST00000485120 ARHGAP35Q9NRY4 1499 aa32.74■■■□□ 2.83
PKD1-218ENST00000485120 CEP162Q5TB80 1403 aa32.71■■■□□ 2.83
PKD1-218ENST00000485120 FHOD3Q2V2M9 1422 aa32.68■■■□□ 2.82
PKD1-218ENST00000485120 TTBK1Q5TCY1 1321 aaPredicted RBP32.67■■■□□ 2.82
PKD1-218ENST00000485120 UACAQ9BZF9 1416 aa32.64■■■□□ 2.82
PKD1-218ENST00000485120 FMN1Q68DA7 1419 aa32.62■■■□□ 2.81
PKD1-218ENST00000485120 UHRF1BP1LA0JNW5 1464 aa32.59■■■□□ 2.81
PKD1-218ENST00000485120 NPM1P06748 294 aaKnown RBP eCLIP32.53■■■□□ 2.8
PKD1-218ENST00000485120 PLB1Q6P1J6 1458 aa32.52■■■□□ 2.8
PKD1-218ENST00000485120 ABCA8O94911 1581 aa32.5■■■□□ 2.79
PKD1-218ENST00000485120 ABCC2Q92887 1545 aa32.5■■■□□ 2.79
PKD1-218ENST00000485120 ADCY10Q96PN6 1610 aa32.42■■■□□ 2.78
PKD1-218ENST00000485120 KDM5BQ9UGL1 1544 aa32.4■■■□□ 2.78
PKD1-218ENST00000485120 CASKIN1Q8WXD9 1431 aa32.39■■■□□ 2.78
PKD1-218ENST00000485120 RAPGEF6Q8TEU7 1601 aa32.38■■■□□ 2.77
PKD1-218ENST00000485120 NUP153P49790 1475 aaKnown RBP32.34■■■□□ 2.77
PKD1-218ENST00000485120 ATP1B4Q9UN42 357 aaPredicted RBP32.32■■■□□ 2.76
PKD1-218ENST00000485120 VPS8Q8N3P4 1428 aa32.32■■■□□ 2.76
PKD1-218ENST00000485120 ATP10BO94823 1461 aa32.3■■■□□ 2.76
PKD1-218ENST00000485120 FYCO1Q9BQS8 1478 aa32.29■■■□□ 2.76
PKD1-218ENST00000485120 HECW1Q76N89 1606 aa32.26■■■□□ 2.75
PKD1-218ENST00000485120 MAPKBP1O60336 1514 aa32.23■■■□□ 2.75
PKD1-218ENST00000485120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.23■■■□□ 2.75
PKD1-218ENST00000485120 HNRNPUL2Q1KMD3 747 aaKnown RBP32.23■■■□□ 2.75
PKD1-218ENST00000485120 CDK11AQ9UQ88 783 aaPredicted RBP32.22■■■□□ 2.75
PKD1-218ENST00000485120 EPRSP07814 1512 aaKnown RBP32.21■■■□□ 2.75
PKD1-218ENST00000485120 ARID3CA6NKF2 412 aa32.2■■■□□ 2.75
PKD1-218ENST00000485120 PCF11O94913 1555 aaKnown RBP32.19■■■□□ 2.74
PKD1-218ENST00000485120 CCDC18Q5T9S5 1454 aa32.19■■■□□ 2.74
PKD1-218ENST00000485120 PLEKHD1A6NEE1 506 aa32.19■■■□□ 2.74
PKD1-218ENST00000485120 ZCCHC11Q5TAX3 1644 aaKnown RBP32.18■■■□□ 2.74
PKD1-218ENST00000485120 ASXL2Q76L83 1435 aa32.17■■■□□ 2.74
PKD1-218ENST00000485120 WDR7Q9Y4E6 1490 aa32.1■■■□□ 2.73
PKD1-218ENST00000485120 CDK13Q14004 1512 aaKnown RBP32.08■■■□□ 2.73
PKD1-218ENST00000485120 APLP2Q06481 763 aa32.06■■■□□ 2.72
PKD1-218ENST00000485120 ABCC10Q5T3U5 1492 aa32.04■■■□□ 2.72
PKD1-218ENST00000485120 MAP3K1Q13233 1512 aa32.03■■■□□ 2.72
PKD1-218ENST00000485120 KCNH8Q96L42 1107 aa32■■■□□ 2.71
PKD1-218ENST00000485120 FAM69CQ0P6D2 419 aa31.99■■■□□ 2.71
PKD1-218ENST00000485120 TROQ12816 1431 aaPredicted RBP31.99■■■□□ 2.71
PKD1-218ENST00000485120 TRHP20396 242 aaPredicted RBP31.98■■■□□ 2.71
PKD1-218ENST00000485120 MTUS2Q5JR59 1369 aa31.93■■■□□ 2.7
PKD1-218ENST00000485120 GLI2P10070 1586 aa31.92■■■□□ 2.7
PKD1-218ENST00000485120 LRRIQ1Q96JM4 1722 aa31.92■■■□□ 2.7
PKD1-218ENST00000485120 TIAM1Q13009 1591 aa31.9■■■□□ 2.7
PKD1-218ENST00000485120 DIP2BQ9P265 1576 aa31.89■■■□□ 2.7
PKD1-218ENST00000485120 LRRC9Q6ZRR7 1453 aa31.84■■■□□ 2.69
PKD1-218ENST00000485120 MAGI3Q5TCQ9 1506 aa31.83■■■□□ 2.69
PKD1-218ENST00000485120 CFAP43Q8NDM7 1665 aa31.81■■■□□ 2.68
PKD1-218ENST00000485120 KANK4Q5T7N3 995 aaPredicted RBP31.81■■■□□ 2.68
PKD1-218ENST00000485120 EHBP1L1Q8N3D4 1523 aa31.8■■■□□ 2.68
PKD1-218ENST00000485120 CD109Q6YHK3 1445 aa31.79■■■□□ 2.68
PKD1-218ENST00000485120 KIF14Q15058 1648 aa31.75■■■□□ 2.67
PKD1-218ENST00000485120 ABCA9Q8IUA7 1624 aa31.75■■■□□ 2.67
PKD1-218ENST00000485120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.75■■■□□ 2.67
PKD1-218ENST00000485120 KIF13AQ9H1H9 1805 aa31.7■■■□□ 2.67
PKD1-218ENST00000485120 MAP3K4Q9Y6R4 1608 aa31.68■■■□□ 2.66
PKD1-218ENST00000485120 PLCH2O75038 1416 aa31.68■■■□□ 2.66
PKD1-218ENST00000485120 TEX14Q8IWB6 1497 aa31.65■■■□□ 2.66
PKD1-218ENST00000485120 CCNB3Q8WWL7 1395 aa31.65■■■□□ 2.66
PKD1-218ENST00000485120 PHLDB1Q86UU1 1377 aa31.64■■■□□ 2.66
PKD1-218ENST00000485120 NCOA2Q15596 1464 aa31.64■■■□□ 2.66
PKD1-218ENST00000485120 EFCAB2Q5VUJ9 269 aa31.63■■■□□ 2.65
PKD1-218ENST00000485120 ARAP3Q8WWN8 1544 aa31.62■■■□□ 2.65
PKD1-218ENST00000485120 TTC37Q6PGP7 1564 aa31.61■■■□□ 2.65
PKD1-218ENST00000485120 SUPT6HQ7KZ85 1726 aaKnown RBP31.6■■■□□ 2.65
PKD1-218ENST00000485120 GPATCH8Q9UKJ3 1502 aaKnown RBP31.59■■■□□ 2.65
PKD1-218ENST00000485120 CFDP1Q9UEE9 299 aaPredicted RBP31.56■■■□□ 2.64
PKD1-218ENST00000485120 NEO1Q92859 1461 aa31.55■■■□□ 2.64
PKD1-218ENST00000485120 FANCAO15360 1455 aa31.52■■■□□ 2.64
PKD1-218ENST00000485120 ARHGAP5Q13017 1502 aa31.48■■■□□ 2.63
PKD1-218ENST00000485120 MYO5CQ9NQX4 1742 aa31.47■■■□□ 2.63
PKD1-218ENST00000485120 MYOM3Q5VTT5 1437 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms