RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 GRIN2AQ12879 1464 aa27.95■■■□□ 2.07
CCDC78-214ENST00000485091 CTTNBP2Q8WZ74 1663 aa27.88■■■□□ 2.05
CCDC78-214ENST00000485091 CLIP1P30622 1438 aa27.87■■■□□ 2.05
CCDC78-214ENST00000485091 CHD1O14646 1710 aa27.83■■■□□ 2.05
CCDC78-214ENST00000485091 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
CCDC78-214ENST00000485091 CEP170Q5SW79 1584 aa27.8■■■□□ 2.04
CCDC78-214ENST00000485091 NUP160Q12769 1436 aa27.74■■■□□ 2.03
CCDC78-214ENST00000485091 KIAA0586Q9BVV6 1533 aa27.73■■■□□ 2.03
CCDC78-214ENST00000485091 IQGAP2Q13576 1575 aa27.73■■■□□ 2.03
CCDC78-214ENST00000485091 P3H3Q8IVL6 736 aa27.72■■■□□ 2.03
CCDC78-214ENST00000485091 ARHGAP35Q9NRY4 1499 aa27.71■■■□□ 2.03
CCDC78-214ENST00000485091 ARAP1Q96P48 1450 aa27.64■■■□□ 2.02
CCDC78-214ENST00000485091 EFCAB5A4FU69 1503 aa27.6■■■□□ 2.01
CCDC78-214ENST00000485091 JPH4Q96JJ6 628 aa27.59■■■□□ 2.01
CCDC78-214ENST00000485091 FHOD3Q2V2M9 1422 aa27.58■■■□□ 2.01
CCDC78-214ENST00000485091 UGGT2Q9NYU1 1516 aa27.57■■■□□ 2
CCDC78-214ENST00000485091 SAMD9Q5K651 1589 aa27.56■■■□□ 2
CCDC78-214ENST00000485091 VPS8Q8N3P4 1428 aa27.54■■■□□ 2
CCDC78-214ENST00000485091 TTBK1Q5TCY1 1321 aaPredicted RBP27.49■■□□□ 1.99
CCDC78-214ENST00000485091 DISP1Q96F81 1524 aa27.49■■□□□ 1.99
CCDC78-214ENST00000485091 CLASP1Q7Z460 1538 aa27.48■■□□□ 1.99
CCDC78-214ENST00000485091 KIAA0556O60303 1618 aa27.47■■□□□ 1.99
CCDC78-214ENST00000485091 PRG4Q92954 1404 aaPredicted RBP27.44■■□□□ 1.98
CCDC78-214ENST00000485091 CARMIL2Q6F5E8 1435 aa27.43■■□□□ 1.98
CCDC78-214ENST00000485091 SHROOM2Q13796 1616 aa27.4■■□□□ 1.98
CCDC78-214ENST00000485091 ATP1B4Q9UN42 357 aaPredicted RBP27.39■■□□□ 1.98
CCDC78-214ENST00000485091 PPARGC1BQ86YN6 1023 aaKnown RBP27.38■■□□□ 1.97
CCDC78-214ENST00000485091 FMN1Q68DA7 1419 aa27.38■■□□□ 1.97
CCDC78-214ENST00000485091 APLP2Q06481 763 aa27.33■■□□□ 1.97
CCDC78-214ENST00000485091 PCF11O94913 1555 aaKnown RBP27.33■■□□□ 1.97
CCDC78-214ENST00000485091 ERCC6L2Q5T890 1561 aa27.33■■□□□ 1.97
CCDC78-214ENST00000485091 RIMBP3CA6NJZ7 1639 aa27.29■■□□□ 1.96
CCDC78-214ENST00000485091 RIMBP3BA6NNM3 1639 aa27.29■■□□□ 1.96
CCDC78-214ENST00000485091 RIMBP3Q9UFD9 1639 aa27.29■■□□□ 1.96
CCDC78-214ENST00000485091 ARHGEF11O15085 1522 aa27.28■■□□□ 1.96
CCDC78-214ENST00000485091 CASKIN1Q8WXD9 1431 aa27.27■■□□□ 1.96
CCDC78-214ENST00000485091 FYCO1Q9BQS8 1478 aa27.24■■□□□ 1.95
CCDC78-214ENST00000485091 PTPRGP23470 1445 aa27.23■■□□□ 1.95
CCDC78-214ENST00000485091 ARID3CA6NKF2 412 aa27.19■■□□□ 1.94
CCDC78-214ENST00000485091 PLB1Q6P1J6 1458 aa27.18■■□□□ 1.94
CCDC78-214ENST00000485091 RAPGEF6Q8TEU7 1601 aa27.15■■□□□ 1.94
CCDC78-214ENST00000485091 HECW1Q76N89 1606 aa27.15■■□□□ 1.94
CCDC78-214ENST00000485091 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
CCDC78-214ENST00000485091 CYB5RLQ6IPT4 315 aa27.12■■□□□ 1.93
CCDC78-214ENST00000485091 TIAM1Q13009 1591 aa27.12■■□□□ 1.93
CCDC78-214ENST00000485091 LRRIQ1Q96JM4 1722 aa27.11■■□□□ 1.93
CCDC78-214ENST00000485091 ABCA8O94911 1581 aa27.09■■□□□ 1.93
CCDC78-214ENST00000485091 NUP153P49790 1475 aaKnown RBP27.07■■□□□ 1.92
CCDC78-214ENST00000485091 CFAP43Q8NDM7 1665 aa27.06■■□□□ 1.92
CCDC78-214ENST00000485091 EPRSP07814 1512 aaKnown RBP27.06■■□□□ 1.92
CCDC78-214ENST00000485091 MAP3K1Q13233 1512 aa27.06■■□□□ 1.92
CCDC78-214ENST00000485091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.06■■□□□ 1.92
CCDC78-214ENST00000485091 HNRNPUL2Q1KMD3 747 aaKnown RBP27.06■■□□□ 1.92
CCDC78-214ENST00000485091 CDK13Q14004 1512 aaKnown RBP27.05■■□□□ 1.92
CCDC78-214ENST00000485091 UACAQ9BZF9 1416 aa27.04■■□□□ 1.92
CCDC78-214ENST00000485091 CCDC18Q5T9S5 1454 aa27.03■■□□□ 1.92
CCDC78-214ENST00000485091 LRRC9Q6ZRR7 1453 aa27.01■■□□□ 1.91
CCDC78-214ENST00000485091 MTUS2Q5JR59 1369 aa26.96■■□□□ 1.91
CCDC78-214ENST00000485091 ABCC2Q92887 1545 aa26.94■■□□□ 1.9
CCDC78-214ENST00000485091 ATP10BO94823 1461 aa26.92■■□□□ 1.9
CCDC78-214ENST00000485091 MAGI3Q5TCQ9 1506 aa26.91■■□□□ 1.9
CCDC78-214ENST00000485091 TRIM26Q12899 539 aaPredicted RBP26.91■■□□□ 1.9
CCDC78-214ENST00000485091 CDK11AQ9UQ88 783 aaPredicted RBP26.88■■□□□ 1.89
CCDC78-214ENST00000485091 UHRF1BP1LA0JNW5 1464 aa26.87■■□□□ 1.89
CCDC78-214ENST00000485091 EHBP1L1Q8N3D4 1523 aa26.86■■□□□ 1.89
CCDC78-214ENST00000485091 PCGF6Q9BYE7 350 aa26.85■■□□□ 1.89
CCDC78-214ENST00000485091 ADCY10Q96PN6 1610 aa26.85■■□□□ 1.89
CCDC78-214ENST00000485091 PLEKHD1A6NEE1 506 aa26.83■■□□□ 1.89
CCDC78-214ENST00000485091 ZCCHC11Q5TAX3 1644 aaKnown RBP26.79■■□□□ 1.88
CCDC78-214ENST00000485091 KDM5BQ9UGL1 1544 aa26.78■■□□□ 1.88
CCDC78-214ENST00000485091 SUPT6HQ7KZ85 1726 aaKnown RBP26.77■■□□□ 1.88
CCDC78-214ENST00000485091 TROQ12816 1431 aaPredicted RBP26.77■■□□□ 1.88
CCDC78-214ENST00000485091 NCOA2Q15596 1464 aa26.76■■□□□ 1.88
CCDC78-214ENST00000485091 PHLDB1Q86UU1 1377 aa26.76■■□□□ 1.88
CCDC78-214ENST00000485091 NPM1P06748 294 aaKnown RBP eCLIP26.73■■□□□ 1.87
CCDC78-214ENST00000485091 KIF14Q15058 1648 aa26.68■■□□□ 1.86
CCDC78-214ENST00000485091 KCNH8Q96L42 1107 aa26.67■■□□□ 1.86
CCDC78-214ENST00000485091 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
CCDC78-214ENST00000485091 RRBP1Q9P2E9 1410 aaKnown RBP26.62■■□□□ 1.85
CCDC78-214ENST00000485091 CCNB3Q8WWL7 1395 aa26.61■■□□□ 1.85
CCDC78-214ENST00000485091 MYOM3Q5VTT5 1437 aa26.61■■□□□ 1.85
CCDC78-214ENST00000485091 FAM50AQ14320 339 aaKnown RBP26.59■■□□□ 1.85
CCDC78-214ENST00000485091 ASXL2Q76L83 1435 aa26.59■■□□□ 1.85
CCDC78-214ENST00000485091 FGD6Q6ZV73 1430 aa26.58■■□□□ 1.85
CCDC78-214ENST00000485091 WDR7Q9Y4E6 1490 aa26.57■■□□□ 1.84
CCDC78-214ENST00000485091 ABCC10Q5T3U5 1492 aa26.55■■□□□ 1.84
CCDC78-214ENST00000485091 ITGAEP38570 1179 aa26.53■■□□□ 1.84
CCDC78-214ENST00000485091 GPATCH8Q9UKJ3 1502 aaKnown RBP26.52■■□□□ 1.84
CCDC78-214ENST00000485091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.51■■□□□ 1.83
CCDC78-214ENST00000485091 CFDP1Q9UEE9 299 aaPredicted RBP26.49■■□□□ 1.83
CCDC78-214ENST00000485091 TTC37Q6PGP7 1564 aa26.49■■□□□ 1.83
CCDC78-214ENST00000485091 PTPN23Q9H3S7 1636 aa26.48■■□□□ 1.83
CCDC78-214ENST00000485091 ZNF777Q9ULD5 760 aaPredicted RBP26.48■■□□□ 1.83
CCDC78-214ENST00000485091 MIA2Q96PC5 1412 aa26.47■■□□□ 1.83
CCDC78-214ENST00000485091 ITSN2Q9NZM3 1697 aa26.47■■□□□ 1.83
CCDC78-214ENST00000485091 CDC42BPAQ5VT25 1732 aa26.46■■□□□ 1.83
CCDC78-214ENST00000485091 ZNF644Q9H582 1327 aaPredicted RBP26.44■■□□□ 1.82
CCDC78-214ENST00000485091 MAPKBP1O60336 1514 aa26.42■■□□□ 1.82
CCDC78-214ENST00000485091 TCOF1Q13428 1488 aaKnown RBP26.4■■□□□ 1.82
CCDC78-214ENST00000485091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms