RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
PEX1-208ENST00000484913 ERICH3Q5RHP9 1530 aa16.85■□□□□ 0.29
PEX1-208ENST00000484913 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
PEX1-208ENST00000484913 ARHGAP35Q9NRY4 1499 aa16.8■□□□□ 0.28
PEX1-208ENST00000484913 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
PEX1-208ENST00000484913 SNAPC4Q5SXM2 1469 aa16.71■□□□□ 0.27
PEX1-208ENST00000484913 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
PEX1-208ENST00000484913 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
PEX1-208ENST00000484913 MTUS2Q5JR59 1369 aa16.67■□□□□ 0.26
PEX1-208ENST00000484913 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.26
PEX1-208ENST00000484913 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
PEX1-208ENST00000484913 WDR62O43379 1518 aa16.63■□□□□ 0.25
PEX1-208ENST00000484913 CUL7Q14999 1698 aa16.62■□□□□ 0.25
PEX1-208ENST00000484913 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
PEX1-208ENST00000484913 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
PEX1-208ENST00000484913 ZNF777Q9ULD5 760 aaPredicted RBP16.59■□□□□ 0.25
PEX1-208ENST00000484913 CHIC2Q9UKJ5 165 aa16.57■□□□□ 0.24
PEX1-208ENST00000484913 EIF4G3O43432 1585 aaKnown RBP16.57■□□□□ 0.24
PEX1-208ENST00000484913 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
PEX1-208ENST00000484913 FMN1Q68DA7 1419 aa16.55■□□□□ 0.24
PEX1-208ENST00000484913 WDR97A6NE52 1622 aa16.55■□□□□ 0.24
PEX1-208ENST00000484913 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
PEX1-208ENST00000484913 PCF11O94913 1555 aaKnown RBP16.53■□□□□ 0.24
PEX1-208ENST00000484913 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.24
PEX1-208ENST00000484913 GRIN2AQ12879 1464 aa16.51■□□□□ 0.23
PEX1-208ENST00000484913 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
PEX1-208ENST00000484913 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
PEX1-208ENST00000484913 PHLDB1Q86UU1 1377 aa16.48■□□□□ 0.23
PEX1-208ENST00000484913 IQGAP2Q13576 1575 aa16.48■□□□□ 0.23
PEX1-208ENST00000484913 NEUROD1Q13562 356 aa16.46■□□□□ 0.23
PEX1-208ENST00000484913 LRRC9Q6ZRR7 1453 aa16.45■□□□□ 0.22
PEX1-208ENST00000484913 KCNH8Q96L42 1107 aa16.45■□□□□ 0.22
PEX1-208ENST00000484913 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
PEX1-208ENST00000484913 RRP7BPQ9NSQ0 103 aa16.45■□□□□ 0.22
PEX1-208ENST00000484913 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
PEX1-208ENST00000484913 CASKIN1Q8WXD9 1431 aa16.44■□□□□ 0.22
PEX1-208ENST00000484913 EFCAB5A4FU69 1503 aa16.44■□□□□ 0.22
PEX1-208ENST00000484913 TIAM1Q13009 1591 aa16.43■□□□□ 0.22
PEX1-208ENST00000484913 TRIM52Q96A61 297 aa16.42■□□□□ 0.22
PEX1-208ENST00000484913 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
PEX1-208ENST00000484913 CARMIL2Q6F5E8 1435 aa16.42■□□□□ 0.22
PEX1-208ENST00000484913 CDK13Q14004 1512 aaKnown RBP16.41■□□□□ 0.22
PEX1-208ENST00000484913 KIAA0586Q9BVV6 1533 aa16.41■□□□□ 0.22
PEX1-208ENST00000484913 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
PEX1-208ENST00000484913 PLEKHD1A6NEE1 506 aa16.38■□□□□ 0.21
PEX1-208ENST00000484913 PRG4Q92954 1404 aaPredicted RBP16.37■□□□□ 0.21
PEX1-208ENST00000484913 PLB1Q6P1J6 1458 aa16.36■□□□□ 0.21
PEX1-208ENST00000484913 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
PEX1-208ENST00000484913 PTPRGP23470 1445 aa16.33■□□□□ 0.2
PEX1-208ENST00000484913 CEP170Q5SW79 1584 aa16.33■□□□□ 0.2
PEX1-208ENST00000484913 CFDP1Q9UEE9 299 aaPredicted RBP16.33■□□□□ 0.2
PEX1-208ENST00000484913 ZNF644Q9H582 1327 aaPredicted RBP16.33■□□□□ 0.2
PEX1-208ENST00000484913 NCOA2Q15596 1464 aa16.3■□□□□ 0.2
PEX1-208ENST00000484913 RAB3GAP2Q9H2M9 1393 aa16.3■□□□□ 0.2
PEX1-208ENST00000484913 EPRSP07814 1512 aaKnown RBP16.28■□□□□ 0.2
PEX1-208ENST00000484913 DISP1Q96F81 1524 aa16.28■□□□□ 0.2
PEX1-208ENST00000484913 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
PEX1-208ENST00000484913 SIN3AQ96ST3 1273 aa16.27■□□□□ 0.2
PEX1-208ENST00000484913 SAMD9Q5K651 1589 aa16.27■□□□□ 0.19
PEX1-208ENST00000484913 FGD6Q6ZV73 1430 aa16.26■□□□□ 0.19
PEX1-208ENST00000484913 KIAA0556O60303 1618 aa16.25■□□□□ 0.19
PEX1-208ENST00000484913 HECW1Q76N89 1606 aa16.23■□□□□ 0.19
PEX1-208ENST00000484913 UGGT2Q9NYU1 1516 aa16.23■□□□□ 0.19
PEX1-208ENST00000484913 NUP160Q12769 1436 aa16.22■□□□□ 0.19
PEX1-208ENST00000484913 CCDC18Q5T9S5 1454 aa16.22■□□□□ 0.19
PEX1-208ENST00000484913 SETD5Q9C0A6 1442 aa16.21■□□□□ 0.19
PEX1-208ENST00000484913 MYOM3Q5VTT5 1437 aa16.21■□□□□ 0.19
PEX1-208ENST00000484913 FOXD1Q16676 465 aa16.2■□□□□ 0.18
PEX1-208ENST00000484913 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
PEX1-208ENST00000484913 DHX57Q6P158 1386 aaKnown RBP16.2■□□□□ 0.18
PEX1-208ENST00000484913 NUP153P49790 1475 aaKnown RBP16.19■□□□□ 0.18
PEX1-208ENST00000484913 CHD1O14646 1710 aa16.19■□□□□ 0.18
PEX1-208ENST00000484913 CFAP43Q8NDM7 1665 aa16.18■□□□□ 0.18
PEX1-208ENST00000484913 MAGI3Q5TCQ9 1506 aa16.18■□□□□ 0.18
PEX1-208ENST00000484913 HNRNPMP52272 730 aaKnown RBP eCLIP16.18■□□□□ 0.18
PEX1-208ENST00000484913 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
PEX1-208ENST00000484913 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
PEX1-208ENST00000484913 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
PEX1-208ENST00000484913 HIRIP3Q9BW71 556 aaPredicted RBP16.16■□□□□ 0.18
PEX1-208ENST00000484913 DIEXFQ68CQ4 756 aaKnown RBP16.15■□□□□ 0.18
PEX1-208ENST00000484913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.18
PEX1-208ENST00000484913 SUPT6HQ7KZ85 1726 aaKnown RBP16.14■□□□□ 0.17
PEX1-208ENST00000484913 RAPGEF6Q8TEU7 1601 aa16.14■□□□□ 0.17
PEX1-208ENST00000484913 TSPY4P0CV99 314 aa16.14■□□□□ 0.17
PEX1-208ENST00000484913 TSPY10P0CW01 314 aa16.14■□□□□ 0.17
PEX1-208ENST00000484913 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
PEX1-208ENST00000484913 ZNF326Q5BKZ1 582 aaKnown RBP16.12■□□□□ 0.17
PEX1-208ENST00000484913 ZNF316A6NFI3 1004 aaPredicted RBP16.11■□□□□ 0.17
PEX1-208ENST00000484913 CYB5RLQ6IPT4 315 aa16.1■□□□□ 0.17
PEX1-208ENST00000484913 LRRIQ1Q96JM4 1722 aa16.1■□□□□ 0.17
PEX1-208ENST00000484913 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
PEX1-208ENST00000484913 PTPRKQ15262 1439 aa16.1■□□□□ 0.17
PEX1-208ENST00000484913 TROQ12816 1431 aaPredicted RBP16.1■□□□□ 0.17
PEX1-208ENST00000484913 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
PEX1-208ENST00000484913 ARHGEF11O15085 1522 aa16.07■□□□□ 0.16
PEX1-208ENST00000484913 UACAQ9BZF9 1416 aa16.07■□□□□ 0.16
PEX1-208ENST00000484913 ATP10BO94823 1461 aa16.07■□□□□ 0.16
PEX1-208ENST00000484913 PTPN23Q9H3S7 1636 aa16.05■□□□□ 0.16
PEX1-208ENST00000484913 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
PEX1-208ENST00000484913 CNGB1Q14028 1251 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 330.8 ms