RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 FBLN2P98095 1184 aa32.77■■■□□ 2.84
VCPKMT-203ENST00000484763 CLIP1P30622 1438 aa32.73■■■□□ 2.83
VCPKMT-203ENST00000484763 CEP170Q5SW79 1584 aa32.71■■■□□ 2.83
VCPKMT-203ENST00000484763 NUP160Q12769 1436 aa32.69■■■□□ 2.82
VCPKMT-203ENST00000484763 IQGAP2Q13576 1575 aa32.68■■■□□ 2.82
VCPKMT-203ENST00000484763 KIAA0586Q9BVV6 1533 aa32.66■■■□□ 2.82
VCPKMT-203ENST00000484763 RANGAP1P46060 587 aaPredicted RBP32.65■■■□□ 2.82
VCPKMT-203ENST00000484763 EFCAB5A4FU69 1503 aa32.57■■■□□ 2.8
VCPKMT-203ENST00000484763 ARHGAP35Q9NRY4 1499 aa32.56■■■□□ 2.8
VCPKMT-203ENST00000484763 SAMD9Q5K651 1589 aa32.51■■■□□ 2.8
VCPKMT-203ENST00000484763 UGGT2Q9NYU1 1516 aa32.51■■■□□ 2.79
VCPKMT-203ENST00000484763 ARAP1Q96P48 1450 aa32.48■■■□□ 2.79
VCPKMT-203ENST00000484763 CLASP1Q7Z460 1538 aa32.41■■■□□ 2.78
VCPKMT-203ENST00000484763 VPS8Q8N3P4 1428 aa32.39■■■□□ 2.77
VCPKMT-203ENST00000484763 KIAA0556O60303 1618 aa32.36■■■□□ 2.77
VCPKMT-203ENST00000484763 FHOD3Q2V2M9 1422 aa32.35■■■□□ 2.77
VCPKMT-203ENST00000484763 SHROOM2Q13796 1616 aa32.35■■■□□ 2.77
VCPKMT-203ENST00000484763 DISP1Q96F81 1524 aa32.34■■■□□ 2.77
VCPKMT-203ENST00000484763 JPH4Q96JJ6 628 aa32.34■■■□□ 2.77
VCPKMT-203ENST00000484763 P3H3Q8IVL6 736 aa32.33■■■□□ 2.77
VCPKMT-203ENST00000484763 CARMIL2Q6F5E8 1435 aa32.27■■■□□ 2.76
VCPKMT-203ENST00000484763 OSCARQ8IYS5 282 aa32.24■■■□□ 2.75
VCPKMT-203ENST00000484763 FMN1Q68DA7 1419 aa32.24■■■□□ 2.75
VCPKMT-203ENST00000484763 PRG4Q92954 1404 aaPredicted RBP32.22■■■□□ 2.75
VCPKMT-203ENST00000484763 PCF11O94913 1555 aaKnown RBP32.16■■■□□ 2.74
VCPKMT-203ENST00000484763 FYCO1Q9BQS8 1478 aa32.1■■■□□ 2.73
VCPKMT-203ENST00000484763 CASKIN1Q8WXD9 1431 aa32.1■■■□□ 2.73
VCPKMT-203ENST00000484763 ERCC6L2Q5T890 1561 aa32.08■■■□□ 2.73
VCPKMT-203ENST00000484763 APLP2Q06481 763 aa32■■■□□ 2.71
VCPKMT-203ENST00000484763 HECW1Q76N89 1606 aa32■■■□□ 2.71
VCPKMT-203ENST00000484763 TTBK1Q5TCY1 1321 aaPredicted RBP31.98■■■□□ 2.71
VCPKMT-203ENST00000484763 RAPGEF6Q8TEU7 1601 aa31.98■■■□□ 2.71
VCPKMT-203ENST00000484763 PTPRGP23470 1445 aa31.96■■■□□ 2.71
VCPKMT-203ENST00000484763 CFAP43Q8NDM7 1665 aa31.94■■■□□ 2.7
VCPKMT-203ENST00000484763 MAP3K1Q13233 1512 aa31.94■■■□□ 2.7
VCPKMT-203ENST00000484763 ATP1B4Q9UN42 357 aaPredicted RBP31.93■■■□□ 2.7
VCPKMT-203ENST00000484763 TIAM1Q13009 1591 aa31.93■■■□□ 2.7
VCPKMT-203ENST00000484763 LRRIQ1Q96JM4 1722 aa31.92■■■□□ 2.7
VCPKMT-203ENST00000484763 PLB1Q6P1J6 1458 aa31.91■■■□□ 2.7
VCPKMT-203ENST00000484763 ABCA8O94911 1581 aa31.9■■■□□ 2.7
VCPKMT-203ENST00000484763 CCDC18Q5T9S5 1454 aa31.87■■■□□ 2.69
VCPKMT-203ENST00000484763 NUP153P49790 1475 aaKnown RBP31.85■■■□□ 2.69
VCPKMT-203ENST00000484763 EPRSP07814 1512 aaKnown RBP31.83■■■□□ 2.69
VCPKMT-203ENST00000484763 PPARGC1BQ86YN6 1023 aaKnown RBP31.82■■■□□ 2.68
VCPKMT-203ENST00000484763 UACAQ9BZF9 1416 aa31.79■■■□□ 2.68
VCPKMT-203ENST00000484763 ARHGEF11O15085 1522 aa31.78■■■□□ 2.68
VCPKMT-203ENST00000484763 CDK13Q14004 1512 aaKnown RBP31.76■■■□□ 2.67
VCPKMT-203ENST00000484763 ABCC2Q92887 1545 aa31.75■■■□□ 2.67
VCPKMT-203ENST00000484763 LRRC9Q6ZRR7 1453 aa31.75■■■□□ 2.67
VCPKMT-203ENST00000484763 KANK4Q5T7N3 995 aaPredicted RBP31.73■■■□□ 2.67
VCPKMT-203ENST00000484763 UHRF1BP1LA0JNW5 1464 aa31.7■■■□□ 2.66
VCPKMT-203ENST00000484763 RIMBP3CA6NJZ7 1639 aa31.67■■■□□ 2.66
VCPKMT-203ENST00000484763 RIMBP3BA6NNM3 1639 aa31.67■■■□□ 2.66
VCPKMT-203ENST00000484763 RIMBP3Q9UFD9 1639 aa31.67■■■□□ 2.66
VCPKMT-203ENST00000484763 ARID3CA6NKF2 412 aa31.67■■■□□ 2.66
VCPKMT-203ENST00000484763 EHBP1L1Q8N3D4 1523 aa31.65■■■□□ 2.66
VCPKMT-203ENST00000484763 MTUS2Q5JR59 1369 aa31.63■■■□□ 2.65
VCPKMT-203ENST00000484763 ATP10BO94823 1461 aa31.63■■■□□ 2.65
VCPKMT-203ENST00000484763 ADCY10Q96PN6 1610 aa31.62■■■□□ 2.65
VCPKMT-203ENST00000484763 MAGI3Q5TCQ9 1506 aa31.62■■■□□ 2.65
VCPKMT-203ENST00000484763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.59■■■□□ 2.65
VCPKMT-203ENST00000484763 HNRNPUL2Q1KMD3 747 aaKnown RBP31.59■■■□□ 2.65
VCPKMT-203ENST00000484763 CDK11AQ9UQ88 783 aaPredicted RBP31.57■■■□□ 2.64
VCPKMT-203ENST00000484763 KDM5BQ9UGL1 1544 aa31.55■■■□□ 2.64
VCPKMT-203ENST00000484763 ZCCHC11Q5TAX3 1644 aaKnown RBP31.55■■■□□ 2.64
VCPKMT-203ENST00000484763 SUPT6HQ7KZ85 1726 aaKnown RBP31.55■■■□□ 2.64
VCPKMT-203ENST00000484763 TRIM26Q12899 539 aaPredicted RBP31.5■■■□□ 2.63
VCPKMT-203ENST00000484763 TROQ12816 1431 aaPredicted RBP31.49■■■□□ 2.63
VCPKMT-203ENST00000484763 NCOA2Q15596 1464 aa31.45■■■□□ 2.63
VCPKMT-203ENST00000484763 PLEKHD1A6NEE1 506 aa31.44■■■□□ 2.62
VCPKMT-203ENST00000484763 PHLDB1Q86UU1 1377 aa31.39■■■□□ 2.62
VCPKMT-203ENST00000484763 KIF14Q15058 1648 aa31.39■■■□□ 2.62
VCPKMT-203ENST00000484763 CYB5RLQ6IPT4 315 aa31.38■■■□□ 2.61
VCPKMT-203ENST00000484763 RRBP1Q9P2E9 1410 aaKnown RBP31.33■■■□□ 2.61
VCPKMT-203ENST00000484763 NPM1P06748 294 aaKnown RBP eCLIP31.32■■■□□ 2.6
VCPKMT-203ENST00000484763 MYOM3Q5VTT5 1437 aa31.3■■■□□ 2.6
VCPKMT-203ENST00000484763 PCGF6Q9BYE7 350 aa31.3■■■□□ 2.6
VCPKMT-203ENST00000484763 WDR7Q9Y4E6 1490 aa31.28■■■□□ 2.6
VCPKMT-203ENST00000484763 ITSN2Q9NZM3 1697 aa31.25■■■□□ 2.59
VCPKMT-203ENST00000484763 ABCC10Q5T3U5 1492 aa31.25■■■□□ 2.59
VCPKMT-203ENST00000484763 CCNB3Q8WWL7 1395 aa31.24■■■□□ 2.59
VCPKMT-203ENST00000484763 FGD6Q6ZV73 1430 aa31.24■■■□□ 2.59
VCPKMT-203ENST00000484763 ASXL2Q76L83 1435 aa31.24■■■□□ 2.59
VCPKMT-203ENST00000484763 MAPKBP1O60336 1514 aa31.19■■■□□ 2.58
VCPKMT-203ENST00000484763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.19■■■□□ 2.58
VCPKMT-203ENST00000484763 CDC42BPAQ5VT25 1732 aa31.18■■■□□ 2.58
VCPKMT-203ENST00000484763 MIA2Q96PC5 1412 aa31.18■■■□□ 2.58
VCPKMT-203ENST00000484763 TTC37Q6PGP7 1564 aa31.18■■■□□ 2.58
VCPKMT-203ENST00000484763 GPATCH8Q9UKJ3 1502 aaKnown RBP31.16■■■□□ 2.58
VCPKMT-203ENST00000484763 KCNH8Q96L42 1107 aa31.15■■■□□ 2.58
VCPKMT-203ENST00000484763 PTPN23Q9H3S7 1636 aa31.15■■■□□ 2.58
VCPKMT-203ENST00000484763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.12■■■□□ 2.57
VCPKMT-203ENST00000484763 PREX2Q70Z35 1606 aa31.12■■■□□ 2.57
VCPKMT-203ENST00000484763 MYO5CQ9NQX4 1742 aa31.11■■■□□ 2.57
VCPKMT-203ENST00000484763 TCOF1Q13428 1488 aaKnown RBP31.1■■■□□ 2.57
VCPKMT-203ENST00000484763 ABCA9Q8IUA7 1624 aa31.08■■■□□ 2.57
VCPKMT-203ENST00000484763 FAM50AQ14320 339 aaKnown RBP31.08■■■□□ 2.57
VCPKMT-203ENST00000484763 DNAJC5Q9H3Z4 198 aa31.06■■■□□ 2.56
VCPKMT-203ENST00000484763 CDC42BPBQ9Y5S2 1711 aa31.06■■■□□ 2.56
VCPKMT-203ENST00000484763 CFDP1Q9UEE9 299 aaPredicted RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms