RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 PRG4Q92954 1404 aaPredicted RBP23.74■■□□□ 1.39
ITGA4-210ENST00000484404 JPH4Q96JJ6 628 aa23.66■■□□□ 1.38
ITGA4-210ENST00000484404 CARMIL1Q5VZK9 1371 aa23.64■■□□□ 1.37
ITGA4-210ENST00000484404 KIAA0586Q9BVV6 1533 aa23.62■■□□□ 1.37
ITGA4-210ENST00000484404 IQGAP2Q13576 1575 aa23.56■■□□□ 1.36
ITGA4-210ENST00000484404 KIF13AQ9H1H9 1805 aa23.54■■□□□ 1.36
ITGA4-210ENST00000484404 ADCY10Q96PN6 1610 aa23.54■■□□□ 1.36
ITGA4-210ENST00000484404 CTTNBP2Q8WZ74 1663 aa23.51■■□□□ 1.35
ITGA4-210ENST00000484404 TTBK1Q5TCY1 1321 aaPredicted RBP23.49■■□□□ 1.35
ITGA4-210ENST00000484404 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
ITGA4-210ENST00000484404 CARMIL2Q6F5E8 1435 aa23.38■■□□□ 1.33
ITGA4-210ENST00000484404 DISP1Q96F81 1524 aa23.37■■□□□ 1.33
ITGA4-210ENST00000484404 KIAA0556O60303 1618 aa23.36■■□□□ 1.33
ITGA4-210ENST00000484404 PTPRGP23470 1445 aa23.35■■□□□ 1.33
ITGA4-210ENST00000484404 MAPKBP1O60336 1514 aa23.34■■□□□ 1.33
ITGA4-210ENST00000484404 DIP2BQ9P265 1576 aa23.34■■□□□ 1.33
ITGA4-210ENST00000484404 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.33
ITGA4-210ENST00000484404 TSPOAP1O95153 1857 aa23.33■■□□□ 1.33
ITGA4-210ENST00000484404 TNIKQ9UKE5 1360 aa23.33■■□□□ 1.33
ITGA4-210ENST00000484404 NPM1P06748 294 aaKnown RBP eCLIP23.32■■□□□ 1.32
ITGA4-210ENST00000484404 PRXQ9BXM0 1461 aa23.29■■□□□ 1.32
ITGA4-210ENST00000484404 ABCC10Q5T3U5 1492 aa23.27■■□□□ 1.32
ITGA4-210ENST00000484404 ABCC2Q92887 1545 aa23.23■■□□□ 1.31
ITGA4-210ENST00000484404 FAM69CQ0P6D2 419 aa23.23■■□□□ 1.31
ITGA4-210ENST00000484404 ZCCHC11Q5TAX3 1644 aaKnown RBP23.22■■□□□ 1.31
ITGA4-210ENST00000484404 UACAQ9BZF9 1416 aa23.19■■□□□ 1.3
ITGA4-210ENST00000484404 UHRF1BP1LA0JNW5 1464 aa23.17■■□□□ 1.3
ITGA4-210ENST00000484404 FAM9AQ8IZU1 332 aaPredicted RBP23.16■■□□□ 1.3
ITGA4-210ENST00000484404 ASXL2Q76L83 1435 aa23.15■■□□□ 1.3
ITGA4-210ENST00000484404 GOLGA3Q08378 1498 aa23.14■■□□□ 1.29
ITGA4-210ENST00000484404 CSRNP3Q8WYN3 585 aa23.13■■□□□ 1.29
ITGA4-210ENST00000484404 PLB1Q6P1J6 1458 aa23.12■■□□□ 1.29
ITGA4-210ENST00000484404 PPRC1Q5VV67 1664 aaKnown RBP23.1■■□□□ 1.29
ITGA4-210ENST00000484404 KDM5BQ9UGL1 1544 aa23.09■■□□□ 1.29
ITGA4-210ENST00000484404 KDM6BO15054 1643 aa23.08■■□□□ 1.29
ITGA4-210ENST00000484404 ABCA8O94911 1581 aa23.08■■□□□ 1.29
ITGA4-210ENST00000484404 EEA1Q15075 1411 aa23.08■■□□□ 1.28
ITGA4-210ENST00000484404 P3H3Q8IVL6 736 aa23.06■■□□□ 1.28
ITGA4-210ENST00000484404 SAMD9Q5K651 1589 aa23.06■■□□□ 1.28
ITGA4-210ENST00000484404 GLI2P10070 1586 aa23.03■■□□□ 1.28
ITGA4-210ENST00000484404 RANGAP1P46060 587 aaPredicted RBP23.03■■□□□ 1.28
ITGA4-210ENST00000484404 KIF21BO75037 1637 aa23.03■■□□□ 1.28
ITGA4-210ENST00000484404 MAP3K4Q9Y6R4 1608 aa23.02■■□□□ 1.28
ITGA4-210ENST00000484404 EPRSP07814 1512 aaKnown RBP23■■□□□ 1.27
ITGA4-210ENST00000484404 EHMT2Q96KQ7 1210 aa23■■□□□ 1.27
ITGA4-210ENST00000484404 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
ITGA4-210ENST00000484404 ARID3CA6NKF2 412 aa22.97■■□□□ 1.27
ITGA4-210ENST00000484404 WDR7Q9Y4E6 1490 aa22.96■■□□□ 1.27
ITGA4-210ENST00000484404 RAPGEF6Q8TEU7 1601 aa22.94■■□□□ 1.26
ITGA4-210ENST00000484404 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
ITGA4-210ENST00000484404 CFAP43Q8NDM7 1665 aa22.9■■□□□ 1.26
ITGA4-210ENST00000484404 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
ITGA4-210ENST00000484404 KCNH8Q96L42 1107 aa22.86■■□□□ 1.25
ITGA4-210ENST00000484404 ATP10BO94823 1461 aa22.83■■□□□ 1.25
ITGA4-210ENST00000484404 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
ITGA4-210ENST00000484404 TEX14Q8IWB6 1497 aa22.81■■□□□ 1.24
ITGA4-210ENST00000484404 NUP153P49790 1475 aaKnown RBP22.79■■□□□ 1.24
ITGA4-210ENST00000484404 COL17A1Q9UMD9 1497 aaPredicted RBP22.79■■□□□ 1.24
ITGA4-210ENST00000484404 UBTFP17480 764 aaKnown RBP22.78■■□□□ 1.24
ITGA4-210ENST00000484404 CD109Q6YHK3 1445 aa22.76■■□□□ 1.23
ITGA4-210ENST00000484404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
ITGA4-210ENST00000484404 HNRNPUL2Q1KMD3 747 aaKnown RBP22.75■■□□□ 1.23
ITGA4-210ENST00000484404 ABCA9Q8IUA7 1624 aa22.73■■□□□ 1.23
ITGA4-210ENST00000484404 MAGI3Q5TCQ9 1506 aa22.72■■□□□ 1.23
ITGA4-210ENST00000484404 CDK13Q14004 1512 aaKnown RBP22.68■■□□□ 1.22
ITGA4-210ENST00000484404 ARHGAP35Q9NRY4 1499 aa22.66■■□□□ 1.22
ITGA4-210ENST00000484404 LRRIQ1Q96JM4 1722 aa22.65■■□□□ 1.22
ITGA4-210ENST00000484404 HECW1Q76N89 1606 aa22.64■■□□□ 1.21
ITGA4-210ENST00000484404 TTC37Q6PGP7 1564 aa22.61■■□□□ 1.21
ITGA4-210ENST00000484404 KDM4FA0A1W2PPD8 638 aa22.6■■□□□ 1.21
ITGA4-210ENST00000484404 ATP1B4Q9UN42 357 aaPredicted RBP22.59■■□□□ 1.21
ITGA4-210ENST00000484404 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
ITGA4-210ENST00000484404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.56■■□□□ 1.2
ITGA4-210ENST00000484404 FMN1Q68DA7 1419 aa22.55■■□□□ 1.2
ITGA4-210ENST00000484404 PCF11O94913 1555 aaKnown RBP22.54■■□□□ 1.2
ITGA4-210ENST00000484404 PLEKHD1A6NEE1 506 aa22.53■■□□□ 1.2
ITGA4-210ENST00000484404 ARAP3Q8WWN8 1544 aa22.52■■□□□ 1.2
ITGA4-210ENST00000484404 FRMPD1Q5SYB0 1578 aa22.52■■□□□ 1.2
ITGA4-210ENST00000484404 KIF14Q15058 1648 aa22.5■■□□□ 1.19
ITGA4-210ENST00000484404 CFAP74Q9C0B2 1584 aa22.49■■□□□ 1.19
ITGA4-210ENST00000484404 MYO5CQ9NQX4 1742 aa22.48■■□□□ 1.19
ITGA4-210ENST00000484404 NEO1Q92859 1461 aa22.48■■□□□ 1.19
ITGA4-210ENST00000484404 RICTORQ6R327 1708 aa22.48■■□□□ 1.19
ITGA4-210ENST00000484404 RAPGEF3O95398 923 aa22.44■■□□□ 1.18
ITGA4-210ENST00000484404 FANCAO15360 1455 aa22.43■■□□□ 1.18
ITGA4-210ENST00000484404 CLIP1P30622 1438 aa22.39■■□□□ 1.17
ITGA4-210ENST00000484404 AKNAQ7Z591 1439 aa22.39■■□□□ 1.17
ITGA4-210ENST00000484404 PHLDB1Q86UU1 1377 aa22.38■■□□□ 1.17
ITGA4-210ENST00000484404 CASKIN1Q8WXD9 1431 aa22.36■■□□□ 1.17
ITGA4-210ENST00000484404 ARHGEF40Q8TER5 1519 aa22.36■■□□□ 1.17
ITGA4-210ENST00000484404 DENND4BO75064 1496 aaPredicted RBP22.35■■□□□ 1.17
ITGA4-210ENST00000484404 CDC42BPBQ9Y5S2 1711 aa22.34■■□□□ 1.17
ITGA4-210ENST00000484404 TROQ12816 1431 aaPredicted RBP22.34■■□□□ 1.17
ITGA4-210ENST00000484404 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.16
ITGA4-210ENST00000484404 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
ITGA4-210ENST00000484404 SIGLEC1Q9BZZ2 1709 aa22.31■■□□□ 1.16
ITGA4-210ENST00000484404 CDK11AQ9UQ88 783 aaPredicted RBP22.31■■□□□ 1.16
ITGA4-210ENST00000484404 BCORL1Q5H9F3 1711 aa22.31■■□□□ 1.16
ITGA4-210ENST00000484404 ARHGAP5Q13017 1502 aa22.31■■□□□ 1.16
ITGA4-210ENST00000484404 PLCH2O75038 1416 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms