RNA–Protein interactions for RNA: ENST00000484393.1

MACF1-218, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-218ENST00000484393 STAG3Q9UJ98 1225 aa11.08□□□□□ -0.64
MACF1-218ENST00000484393 BAZ1AQ9NRL2 1556 aaPredicted RBP11.04□□□□□ -0.64
MACF1-218ENST00000484393 SMARCA2P51531 1590 aa11.03□□□□□ -0.64
MACF1-218ENST00000484393 ATAD2BQ9ULI0 1458 aa11.03□□□□□ -0.64
MACF1-218ENST00000484393 PDS5BQ9NTI5 1447 aa11.01□□□□□ -0.65
MACF1-218ENST00000484393 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
MACF1-218ENST00000484393 LAMC3Q9Y6N6 1575 aa10.98□□□□□ -0.65
MACF1-218ENST00000484393 HMGXB3Q12766 1538 aa10.96□□□□□ -0.65
MACF1-218ENST00000484393 PROM2Q8N271 834 aa10.96□□□□□ -0.65
MACF1-218ENST00000484393 WIZO95785 1651 aa10.95□□□□□ -0.66
MACF1-218ENST00000484393 KIF21AQ7Z4S6 1674 aa10.95□□□□□ -0.66
MACF1-218ENST00000484393 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
MACF1-218ENST00000484393 EVX2Q03828 476 aa10.94□□□□□ -0.66
MACF1-218ENST00000484393 CYB5RLQ6IPT4 315 aa10.93□□□□□ -0.66
MACF1-218ENST00000484393 RIMBP3CA6NJZ7 1639 aa10.93□□□□□ -0.66
MACF1-218ENST00000484393 RIMBP3BA6NNM3 1639 aa10.93□□□□□ -0.66
MACF1-218ENST00000484393 RIMBP3Q9UFD9 1639 aa10.93□□□□□ -0.66
MACF1-218ENST00000484393 PEG3Q9GZU2 1588 aa10.91□□□□□ -0.66
MACF1-218ENST00000484393 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
MACF1-218ENST00000484393 MRC2Q9UBG0 1479 aa10.9□□□□□ -0.66
MACF1-218ENST00000484393 CD44P16070 742 aaKnown RBP10.9□□□□□ -0.66
MACF1-218ENST00000484393 BAZ1BQ9UIG0 1483 aaKnown RBP10.88□□□□□ -0.67
MACF1-218ENST00000484393 WDR62O43379 1518 aa10.86□□□□□ -0.67
MACF1-218ENST00000484393 CREBZFQ9NS37 354 aa10.86□□□□□ -0.67
MACF1-218ENST00000484393 RSF1Q96T23 1441 aaPredicted RBP10.85□□□□□ -0.67
MACF1-218ENST00000484393 ARHGEF11O15085 1522 aa10.84□□□□□ -0.67
MACF1-218ENST00000484393 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
MACF1-218ENST00000484393 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
MACF1-218ENST00000484393 PAK3O75914 559 aaPredicted RBP10.82□□□□□ -0.68
MACF1-218ENST00000484393 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
MACF1-218ENST00000484393 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
MACF1-218ENST00000484393 ILDR1Q86SU0 546 aaPredicted RBP10.81□□□□□ -0.68
MACF1-218ENST00000484393 ZRANB1Q9UGI0 708 aa10.8□□□□□ -0.68
MACF1-218ENST00000484393 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
MACF1-218ENST00000484393 GABBR2O75899 941 aa10.77□□□□□ -0.69
MACF1-218ENST00000484393 PLCD3Q8N3E9 789 aa10.77□□□□□ -0.69
MACF1-218ENST00000484393 MIER1Q8N108 512 aa10.76□□□□□ -0.69
MACF1-218ENST00000484393 CEP164Q9UPV0 1460 aa10.72□□□□□ -0.69
MACF1-218ENST00000484393 ARAP1Q96P48 1450 aa10.69□□□□□ -0.7
MACF1-218ENST00000484393 SUPT5HO00267 1087 aaKnown RBP10.69□□□□□ -0.7
MACF1-218ENST00000484393 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
MACF1-218ENST00000484393 PRDM2Q13029 1718 aa10.67□□□□□ -0.7
MACF1-218ENST00000484393 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
MACF1-218ENST00000484393 AMER1Q5JTC6 1135 aaPredicted RBP10.66□□□□□ -0.7
MACF1-218ENST00000484393 DCBLD2Q96PD2 775 aa10.66□□□□□ -0.7
MACF1-218ENST00000484393 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.7
MACF1-218ENST00000484393 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
MACF1-218ENST00000484393 CCDC88BA6NC98 1476 aa10.62□□□□□ -0.71
MACF1-218ENST00000484393 CLCN6P51797 869 aa10.62□□□□□ -0.71
MACF1-218ENST00000484393 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
MACF1-218ENST00000484393 PHF12Q96QT6 1004 aa10.62□□□□□ -0.71
MACF1-218ENST00000484393 ZBTB47Q9UFB7 747 aaPredicted RBP10.62□□□□□ -0.71
MACF1-218ENST00000484393 MNX1P50219 401 aaPredicted RBP10.61□□□□□ -0.71
MACF1-218ENST00000484393 URB2Q14146 1524 aaKnown RBP10.6□□□□□ -0.71
MACF1-218ENST00000484393 ZNF608Q9ULD9 1512 aaPredicted RBP10.58□□□□□ -0.72
MACF1-218ENST00000484393 IFT140Q96RY7 1462 aa10.56□□□□□ -0.72
MACF1-218ENST00000484393 RTN4Q9NQC3 1192 aaKnown RBP10.56□□□□□ -0.72
MACF1-218ENST00000484393 GALR2O43603 387 aaPredicted RBP10.55□□□□□ -0.72
MACF1-218ENST00000484393 CFTRP13569 1480 aa10.53□□□□□ -0.72
MACF1-218ENST00000484393 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
MACF1-218ENST00000484393 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
MACF1-218ENST00000484393 CHD1O14646 1710 aa10.48□□□□□ -0.73
MACF1-218ENST00000484393 RASEFQ8IZ41 740 aa10.47□□□□□ -0.73
MACF1-218ENST00000484393 MS4A3Q96HJ5 214 aa10.46□□□□□ -0.73
MACF1-218ENST00000484393 AQRO60306 1485 aaKnown RBP eCLIP10.45□□□□□ -0.741e-6■■■■■ 33.2
MACF1-218ENST00000484393 KDM4FA0A1W2PPD8 638 aa10.45□□□□□ -0.74
MACF1-218ENST00000484393 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
MACF1-218ENST00000484393 LHX8Q68G74 356 aa10.44□□□□□ -0.74
MACF1-218ENST00000484393 FAM212AQ96EL1 285 aa10.44□□□□□ -0.74
MACF1-218ENST00000484393 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
MACF1-218ENST00000484393 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
MACF1-218ENST00000484393 CCDC61Q9Y6R9 512 aa10.42□□□□□ -0.74
MACF1-218ENST00000484393 CHMP7Q8WUX9 453 aaPredicted RBP10.41□□□□□ -0.74
MACF1-218ENST00000484393 NUBP1P53384 320 aa10.4□□□□□ -0.74
MACF1-218ENST00000484393 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.74
MACF1-218ENST00000484393 TOPBP1Q92547 1522 aa10.38□□□□□ -0.75
MACF1-218ENST00000484393 GAPVD1Q14C86 1478 aa10.37□□□□□ -0.75
MACF1-218ENST00000484393 DNMBPQ6XZF7 1577 aa10.37□□□□□ -0.75
MACF1-218ENST00000484393 CIZ1Q9ULV3 898 aaPredicted RBP10.37□□□□□ -0.75
MACF1-218ENST00000484393 MAP3K13O43283 966 aa10.36□□□□□ -0.75
MACF1-218ENST00000484393 KIF12Q96FN5 646 aa10.36□□□□□ -0.75
MACF1-218ENST00000484393 CLASP1Q7Z460 1538 aa10.36□□□□□ -0.75
MACF1-218ENST00000484393 ABCC8Q09428 1581 aa10.35□□□□□ -0.75
MACF1-218ENST00000484393 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
MACF1-218ENST00000484393 SYNJ1O43426 1573 aa10.33□□□□□ -0.76
MACF1-218ENST00000484393 GSE1Q14687 1217 aa10.32□□□□□ -0.76
MACF1-218ENST00000484393 FBXO41Q8TF61 875 aa10.32□□□□□ -0.76
MACF1-218ENST00000484393 CUX1P39880 1505 aa10.32□□□□□ -0.76
MACF1-218ENST00000484393 TARBP1Q13395 1621 aaKnown RBP10.3□□□□□ -0.76
MACF1-218ENST00000484393 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
MACF1-218ENST00000484393 BIVM-ERCC5R4GMW8 1640 aa10.3□□□□□ -0.76
MACF1-218ENST00000484393 ATMINO43313 823 aaPredicted RBP10.29□□□□□ -0.76
MACF1-218ENST00000484393 PYGBP11216 843 aa10.28□□□□□ -0.76
MACF1-218ENST00000484393 SLC39A7Q92504 469 aa10.28□□□□□ -0.76
MACF1-218ENST00000484393 METRNQ9UJH8 293 aa10.28□□□□□ -0.76
MACF1-218ENST00000484393 TOP2BQ02880 1626 aa10.27□□□□□ -0.77
MACF1-218ENST00000484393 FAM69CQ0P6D2 419 aa10.27□□□□□ -0.77
MACF1-218ENST00000484393 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
MACF1-218ENST00000484393 SNAPC4Q5SXM2 1469 aa10.27□□□□□ -0.77
MACF1-218ENST00000484393 FGD5Q6ZNL6 1462 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms