RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 PRG4Q92954 1404 aaPredicted RBP49.22■■■■■ 5.47
HLA-C-207ENST00000484378 JPH4Q96JJ6 628 aa49.18■■■■■ 5.46
HLA-C-207ENST00000484378 KIAA0586Q9BVV6 1533 aa49.01■■■■■ 5.44
HLA-C-207ENST00000484378 CARMIL1Q5VZK9 1371 aa48.97■■■■■ 5.43
HLA-C-207ENST00000484378 IQGAP2Q13576 1575 aa48.64■■■■■ 5.38
HLA-C-207ENST00000484378 ADCY10Q96PN6 1610 aa48.62■■■■■ 5.37
HLA-C-207ENST00000484378 RAPGEF2Q9Y4G8 1499 aa48.6■■■■■ 5.37
HLA-C-207ENST00000484378 NPM1P06748 294 aaKnown RBP eCLIP48.57■■■■■ 5.37
HLA-C-207ENST00000484378 CARMIL2Q6F5E8 1435 aa48.55■■■■■ 5.36
HLA-C-207ENST00000484378 KIF13AQ9H1H9 1805 aa48.53■■■■■ 5.36
HLA-C-207ENST00000484378 MAPKBP1O60336 1514 aa48.49■■■■■ 5.35
HLA-C-207ENST00000484378 PTPRGP23470 1445 aa48.49■■■■■ 5.35
HLA-C-207ENST00000484378 TNIKQ9UKE5 1360 aa48.44■■■■■ 5.35
HLA-C-207ENST00000484378 TTBK1Q5TCY1 1321 aaPredicted RBP48.42■■■■■ 5.34
HLA-C-207ENST00000484378 ABCC10Q5T3U5 1492 aa48.38■■■■■ 5.34
HLA-C-207ENST00000484378 DISP1Q96F81 1524 aa48.34■■■■■ 5.33
HLA-C-207ENST00000484378 UGGT2Q9NYU1 1516 aa48.32■■■■■ 5.33
HLA-C-207ENST00000484378 FAM69CQ0P6D2 419 aa48.31■■■■■ 5.32
HLA-C-207ENST00000484378 DIP2BQ9P265 1576 aa48.3■■■■■ 5.32
HLA-C-207ENST00000484378 CTTNBP2Q8WZ74 1663 aa48.23■■■■■ 5.31
HLA-C-207ENST00000484378 ABCC2Q92887 1545 aa48.21■■■■■ 5.31
HLA-C-207ENST00000484378 KIAA0556O60303 1618 aa48.19■■■■■ 5.31
HLA-C-207ENST00000484378 PRXQ9BXM0 1461 aa48.16■■■■■ 5.3
HLA-C-207ENST00000484378 UHRF1BP1LA0JNW5 1464 aa48.14■■■■■ 5.3
HLA-C-207ENST00000484378 UACAQ9BZF9 1416 aa48.14■■■■■ 5.3
HLA-C-207ENST00000484378 ASXL2Q76L83 1435 aa47.99■■■■■ 5.27
HLA-C-207ENST00000484378 GOLGA3Q08378 1498 aa47.98■■■■■ 5.27
HLA-C-207ENST00000484378 PLB1Q6P1J6 1458 aa47.97■■■■■ 5.27
HLA-C-207ENST00000484378 TSPOAP1O95153 1857 aa47.95■■■■■ 5.27
HLA-C-207ENST00000484378 KDM5BQ9UGL1 1544 aa47.92■■■■■ 5.26
HLA-C-207ENST00000484378 ZCCHC11Q5TAX3 1644 aaKnown RBP47.86■■■■■ 5.25
HLA-C-207ENST00000484378 CSRNP3Q8WYN3 585 aa47.86■■■■■ 5.25
HLA-C-207ENST00000484378 GLI2P10070 1586 aa47.81■■■■■ 5.24
HLA-C-207ENST00000484378 KDM6BO15054 1643 aa47.81■■■■■ 5.24
HLA-C-207ENST00000484378 AEBP2Q6ZN18 517 aaPredicted RBP47.8■■■■■ 5.24
HLA-C-207ENST00000484378 EEA1Q15075 1411 aa47.79■■■■■ 5.24
HLA-C-207ENST00000484378 EPRSP07814 1512 aaKnown RBP47.71■■■■■ 5.23
HLA-C-207ENST00000484378 ABCA8O94911 1581 aa47.71■■■■■ 5.23
HLA-C-207ENST00000484378 PPRC1Q5VV67 1664 aaKnown RBP47.65■■■■■ 5.22
HLA-C-207ENST00000484378 WDR7Q9Y4E6 1490 aa47.61■■■■■ 5.21
HLA-C-207ENST00000484378 MAP3K4Q9Y6R4 1608 aa47.59■■■■■ 5.21
HLA-C-207ENST00000484378 P3H3Q8IVL6 736 aa47.55■■■■■ 5.2
HLA-C-207ENST00000484378 FAM9AQ8IZU1 332 aaPredicted RBP47.54■■■■■ 5.2
HLA-C-207ENST00000484378 SAMD9Q5K651 1589 aa47.54■■■■■ 5.2
HLA-C-207ENST00000484378 TEX14Q8IWB6 1497 aa47.45■■■■■ 5.19
HLA-C-207ENST00000484378 KIF21BO75037 1637 aa47.4■■■■■ 5.18
HLA-C-207ENST00000484378 RANGAP1P46060 587 aaPredicted RBP47.33■■■■■ 5.17
HLA-C-207ENST00000484378 ARID3CA6NKF2 412 aa47.32■■■■■ 5.17
HLA-C-207ENST00000484378 KCNH8Q96L42 1107 aa47.32■■■■■ 5.17
HLA-C-207ENST00000484378 CFAP43Q8NDM7 1665 aa47.3■■■■■ 5.16
HLA-C-207ENST00000484378 RAPGEF6Q8TEU7 1601 aa47.29■■■■■ 5.16
HLA-C-207ENST00000484378 ATP10BO94823 1461 aa47.28■■■■■ 5.16
HLA-C-207ENST00000484378 CHIC1Q5VXU3 224 aa47.28■■■■■ 5.16
HLA-C-207ENST00000484378 COL17A1Q9UMD9 1497 aaPredicted RBP47.26■■■■■ 5.16
HLA-C-207ENST00000484378 CD109Q6YHK3 1445 aa47.25■■■■■ 5.15
HLA-C-207ENST00000484378 FHOD3Q2V2M9 1422 aa47.22■■■■■ 5.15
HLA-C-207ENST00000484378 MAGI3Q5TCQ9 1506 aa47.2■■■■■ 5.15
HLA-C-207ENST00000484378 EFCAB5A4FU69 1503 aa47.15■■■■■ 5.14
HLA-C-207ENST00000484378 NUP153P49790 1475 aaKnown RBP47.09■■■■■ 5.13
HLA-C-207ENST00000484378 KDM4FA0A1W2PPD8 638 aa47.07■■■■■ 5.13
HLA-C-207ENST00000484378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP47.05■■■■■ 5.12
HLA-C-207ENST00000484378 HNRNPUL2Q1KMD3 747 aaKnown RBP47.05■■■■■ 5.12
HLA-C-207ENST00000484378 EHMT2Q96KQ7 1210 aa47.04■■■■■ 5.12
HLA-C-207ENST00000484378 ABCA9Q8IUA7 1624 aa47.01■■■■■ 5.12
HLA-C-207ENST00000484378 UBTFP17480 764 aaKnown RBP47■■■■■ 5.11
HLA-C-207ENST00000484378 ADGRL1O94910 1474 aa46.87■■■■■ 5.09
HLA-C-207ENST00000484378 ARAP3Q8WWN8 1544 aa46.82■■■■■ 5.09
HLA-C-207ENST00000484378 PLEKHD1A6NEE1 506 aa46.78■■■■■ 5.08
HLA-C-207ENST00000484378 PHLDB1Q86UU1 1377 aa46.75■■■■■ 5.07
HLA-C-207ENST00000484378 ARHGAP35Q9NRY4 1499 aa46.75■■■■■ 5.07
HLA-C-207ENST00000484378 FMN1Q68DA7 1419 aa46.71■■■■■ 5.07
HLA-C-207ENST00000484378 NEO1Q92859 1461 aa46.71■■■■■ 5.07
HLA-C-207ENST00000484378 CDK13Q14004 1512 aaKnown RBP46.69■■■■■ 5.07
HLA-C-207ENST00000484378 HECW1Q76N89 1606 aa46.64■■■■■ 5.06
HLA-C-207ENST00000484378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP46.59■■■■■ 5.05
HLA-C-207ENST00000484378 ATP1B4Q9UN42 357 aaPredicted RBP46.58■■■■■ 5.05
HLA-C-207ENST00000484378 TTC37Q6PGP7 1564 aa46.56■■■■■ 5.04
HLA-C-207ENST00000484378 RAPGEF3O95398 923 aa46.53■■■■■ 5.04
HLA-C-207ENST00000484378 CFAP74Q9C0B2 1584 aa46.51■■■■■ 5.04
HLA-C-207ENST00000484378 FRMPD1Q5SYB0 1578 aa46.49■■■■■ 5.03
HLA-C-207ENST00000484378 FANCAO15360 1455 aa46.48■■■■■ 5.03
HLA-C-207ENST00000484378 AKNAQ7Z591 1439 aa46.42■■■■■ 5.02
HLA-C-207ENST00000484378 DENND4BO75064 1496 aaPredicted RBP46.38■■■■■ 5.02
HLA-C-207ENST00000484378 CDK11AQ9UQ88 783 aaPredicted RBP46.38■■■■■ 5.02
HLA-C-207ENST00000484378 RICTORQ6R327 1708 aa46.34■■■■■ 5.01
HLA-C-207ENST00000484378 LRRIQ1Q96JM4 1722 aa46.31■■■■■ 5
HLA-C-207ENST00000484378 PLCH2O75038 1416 aa46.28■■■■■ 5
HLA-C-207ENST00000484378 KIF14Q15058 1648 aa46.28■■■■■ 5
HLA-C-207ENST00000484378 PCF11O94913 1555 aaKnown RBP46.28■■■■■ 5
HLA-C-207ENST00000484378 TROQ12816 1431 aaPredicted RBP46.27■■■■■ 5
HLA-C-207ENST00000484378 ARHGEF40Q8TER5 1519 aa46.26■■■■■ 5
HLA-C-207ENST00000484378 MYO5CQ9NQX4 1742 aa46.25■■■■■ 4.99
HLA-C-207ENST00000484378 CLIP1P30622 1438 aa46.23■■■■■ 4.99
HLA-C-207ENST00000484378 CASKIN1Q8WXD9 1431 aa46.23■■■■■ 4.99
HLA-C-207ENST00000484378 ZMYM4Q5VZL5 1548 aa46.19■■■■■ 4.99
HLA-C-207ENST00000484378 CCDC18Q5T9S5 1454 aa46.18■■■■■ 4.98
HLA-C-207ENST00000484378 ADAMTSL3P82987 1691 aa46.14■■■■■ 4.98
HLA-C-207ENST00000484378 ARID4BQ4LE39 1312 aaPredicted RBP46.14■■■■■ 4.98
HLA-C-207ENST00000484378 SCAPERQ9BY12 1400 aa46.13■■■■■ 4.98
HLA-C-207ENST00000484378 HECW2Q9P2P5 1572 aa46.12■■■■■ 4.97
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms